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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3449479..3451200- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002745-T1 ID=KJC3_002745-T1|Name=KJC3_002745-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1722bp|location=Sequence derived from alignment at ch2:3449479..3451200- (Aspergillus niger KJC3)
ATCGAAGGAATTTGGAAATTCACAACGGAAATACAACCCTCCAGCGACCC
AGGCCACTCGTAAAGAGTCACCAAAGTGTCCAGGCAAAAGCCAGGCGAGA
CAGCTGAGACCCGCTCGGCGCCGTTCCACTTCATTAGCCCCAGATCTAAT
AGACTAGCCACCTAGGCCTATGCAGAGATTCAGGGGAATTGAAAAAGACT
GGGGAGATTGCCTGGTCACCTTTCACAATCCGGTCGACCTTCTGTCTGGC
CCAACTAAAAATGTTTCTATTCACATCACAGAAACGGTTCGGCCGGTTGA
TTCTCTATGCGCTGGGGGTGCTCGGGATCATCCTCATCCTTTGGCAGTTG
CCCTATGCTCGGCCCACCGTGCGGATAGGTGCTAGACGCGCCCGGTCACA
GTTCGAGGCGATCAGGAACGAAACTTTGGGGGTATTTCCTTCCAATGATG
TTGATATTAGCCCCCACCCTAATTATGTATAGGTCCAGAAAATATTCGCG
ATCAATTTGCCTAGCAGGGTTGACAAGCGCGACAATCTTGTCCTCGGTTC
TTCAGTTAGTGGGTTTAATATCGACTGGGTAAACGGTATCACTCCCGACG
AGGTTGACCCCAGGACATACCCTTATGTGAGTCCATAAGTTAGATCCGAT
AGAATGCCTGCCACTGACAATTCAGAACTGGAACTATGACCATAAACCTA
CCGAGTATGGTGCTCGACGGGCTCATGTGAACGCCATGCAACGGTATGCG
ACAGTCTGCCCCCCTTTCCGTACATCTGGCTAACGTTGCATTCCCAGAAT
TGTTCATGAAAGGATAGGAAGTGCCATGATCATGGAGGATGATGTCGACT
GGGACGTCAATCTCAAAACCCAGCTACAGAGCTTTGCTCTCGGTGTACGG
GCTCTCCAAGGGGCGGATAAGAAGGTGACGGCTTCGCCCTACGGTGATGA
CTGGGACATCATCTGGCTTGGTCACTGTGGCATGGAATGTCGAACTAATG
AGCCGTATTTCGTGAGCTCAAATGATACAACCGTCCTTCCACCACATCAC
TTTCTGCCCTACTGGCGCGATCCGCCTCCGTTCGGGATACCAGATTACAC
CCGTCTGACCTGCGCCGTCAACGATGCTGTTTGCTCCATAGTCTATGCTG
TGAGCTATCATGGTGCTCAGAAGATCTTGTCTGCTCTTTCTGTGAACCCA
ACAGGCCTCGCAGACAAAATCGACATTGGCGCCCAGTTCGACGTATCGCT
CGGCCGCATGTGCGGTAATGGCTATCTCCGGTGCTTTGCGGTCTACCCAT
CCTTAACAGGTGGATATCATCCTGCTGGGCCCTCCTCGAAGGAATCTGAT
ATTCATGGCGGGAATGAGGATGTCCATCCTGTCTCCAGTCACGGGGTTAT
GTACAGTACAATGCTGAACATCAACCGCATACTAAACGGTGAGGATACGG
TTGTTTCCAACTGGGATGACGCCCCTGCTCCAGTGATTAACCCGGCGAAC
ATCTCAGTGGTTGGGGGAACGATGCACATGCTGCAAGAGAACGACATGTA
TACTCTTTCGGTTGTCAACCCATAACCAAAAGTTGGGCATAGACCTGCAG
CTTCGAAAATCTTGCTCAATAGTGTATATAGACTTGCTTTCCTTTAAAAG
ATACCTACATTAATATGATTGGCCTTTTGGTTTTGTCTACATCTCGGGAT
TAAGAAGCTCTATTCTTGCGCC back to topCoding sequence (CDS) from alignment at ch2:3449479..3451200- >KJC3_002745-T1 ID=KJC3_002745-T1|Name=KJC3_002745-T1|organism=Aspergillus niger KJC3|type=CDS|length=4644bp|location=Sequence derived from alignment at ch2:3449479..3451200- (Aspergillus niger KJC3)
AATTGTTCATGAAAGGATAGGAAGTGCCATGATCATGGAGGATGATGTCG
ACTGGGACGTCAATCTCAAAACCCAGCTACAGAGCTTTGCTCTCGGTGTA
CGGGCTCTCCAAGGGGCGGATAAGAAGGTGACGGCTTCGCCCTACGGTGA
TGACTGGGACATCATCTGGCTTGGTCACTGTGGCATGGAATGTCGAACTA
ATGAGCCGTATTTCGTGAGCTCAAATGATACAACCGTCCTTCCACCACAT
CACTTTCTGCCCTACTGGCGCGATCCGCCTCCGTTCGGGATACCAGATTA
CACCCGTCTGACCTGCGCCGTCAACGATGCTGTTTGCTCCATAGTCTATG
CTGTGAGCTATCATGGTGCTCAGAAGATCTTGTCTGCTCTTTCTGTGAAC
CCAACAGGCCTCGCAGACAAAATCGACATTGGCGCCCAGTTCGACGTATC
GCTCGGCCGCATGTGCGGTAATGGCTATCTCCGGTGCTTTGCGGTCTACC
CATCCTTAACAGGTGGATATCATCCTGCTGGGCCCTCCTCGAAGGAATCT
GATATTCATGGCGGGAATGAGGATGTCCATCCTGTCTCCAGTCACGGGGT
TATGTACAGTACAATGCTGAACATCAACCGCATACTAAACGGTGAGGATA
CGGTTGTTTCCAACTGGGATGACGCCCCTGCTCCAGTGATTAACCCGGCG
AACATCTCAGTGGTTGGGGGAACGATGCACATGCTGCAAGAGAACGACAT
GTATACTCTTTCGGTTGTCAACCCATAAAACTGGAACTATGACCATAAAC
CTACCGAGTATGGTGCTCGACGGGCTCATGTGAACGCCATGCAACGGTCC
AGAAAATATTCGCGATCAATTTGCCTAGCAGGGTTGACAAGCGCGACAAT
CTTGTCCTCGGTTCTTCAGTTAGTGGGTTTAATATCGACTGGGTAAACGG
TATCACTCCCGACGAGGTTGACCCCAGGACATACCCTTATATGTTTCTAT
TCACATCACAGAAACGGTTCGGCCGGTTGATTCTCTATGCGCTGGGGGTG
CTCGGGATCATCCTCATCCTTTGGCAGTTGCCCTATGCTCGGCCCACCGT
GCGGATAGGTGCTAGACGCGCCCGGTCACAGTTCGAGGCGATCAGGAACG
AAACTTTGGGGAATTGTTCATGAAAGGATAGGAAGTGCCATGATCATGGA
GGATGATGTCGACTGGGACGTCAATCTCAAAACCCAGCTACAGAGCTTTG
CTCTCGGTGTACGGGCTCTCCAAGGGGCGGATAAGAAGGTGACGGCTTCG
CCCTACGGTGATGACTGGGACATCATCTGGCTTGGTCACTGTGGCATGGA
ATGTCGAACTAATGAGCCGTATTTCGTGAGCTCAAATGATACAACCGTCC
TTCCACCACATCACTTTCTGCCCTACTGGCGCGATCCGCCTCCGTTCGGG
ATACCAGATTACACCCGTCTGACCTGCGCCGTCAACGATGCTGTTTGCTC
CATAGTCTATGCTGTGAGCTATCATGGTGCTCAGAAGATCTTGTCTGCTC
TTTCTGTGAACCCAACAGGCCTCGCAGACAAAATCGACATTGGCGCCCAG
TTCGACGTATCGCTCGGCCGCATGTGCGGTAATGGCTATCTCCGGTGCTT
TGCGGTCTACCCATCCTTAACAGGTGGATATCATCCTGCTGGGCCCTCCT
CGAAGGAATCTGATATTCATGGCGGGAATGAGGATGTCCATCCTGTCTCC
AGTCACGGGGTTATGTACAGTACAATGCTGAACATCAACCGCATACTAAA
CGGTGAGGATACGGTTGTTTCCAACTGGGATGACGCCCCTGCTCCAGTGA
TTAACCCGGCGAACATCTCAGTGGTTGGGGGAACGATGCACATGCTGCAA
GAGAACGACATGTATACTCTTTCGGTTGTCAACCCATAAAACTGGAACTA
TGACCATAAACCTACCGAGTATGGTGCTCGACGGGCTCATGTGAACGCCA
TGCAACGGTCCAGAAAATATTCGCGATCAATTTGCCTAGCAGGGTTGACA
AGCGCGACAATCTTGTCCTCGGTTCTTCAGTTAGTGGGTTTAATATCGAC
TGGGTAAACGGTATCACTCCCGACGAGGTTGACCCCAGGACATACCCTTA
TATGTTTCTATTCACATCACAGAAACGGTTCGGCCGGTTGATTCTCTATG
CGCTGGGGGTGCTCGGGATCATCCTCATCCTTTGGCAGTTGCCCTATGCT
CGGCCCACCGTGCGGATAGGTGCTAGACGCGCCCGGTCACAGTTCGAGGC
GATCAGGAACGAAACTTTGGGGAATTGTTCATGAAAGGATAGGAAGTGCC
ATGATCATGGAGGATGATGTCGACTGGGACGTCAATCTCAAAACCCAGCT
ACAGAGCTTTGCTCTCGGTGTACGGGCTCTCCAAGGGGCGGATAAGAAGG
TGACGGCTTCGCCCTACGGTGATGACTGGGACATCATCTGGCTTGGTCAC
TGTGGCATGGAATGTCGAACTAATGAGCCGTATTTCGTGAGCTCAAATGA
TACAACCGTCCTTCCACCACATCACTTTCTGCCCTACTGGCGCGATCCGC
CTCCGTTCGGGATACCAGATTACACCCGTCTGACCTGCGCCGTCAACGAT
GCTGTTTGCTCCATAGTCTATGCTGTGAGCTATCATGGTGCTCAGAAGAT
CTTGTCTGCTCTTTCTGTGAACCCAACAGGCCTCGCAGACAAAATCGACA
TTGGCGCCCAGTTCGACGTATCGCTCGGCCGCATGTGCGGTAATGGCTAT
CTCCGGTGCTTTGCGGTCTACCCATCCTTAACAGGTGGATATCATCCTGC
TGGGCCCTCCTCGAAGGAATCTGATATTCATGGCGGGAATGAGGATGTCC
ATCCTGTCTCCAGTCACGGGGTTATGTACAGTACAATGCTGAACATCAAC
CGCATACTAAACGGTGAGGATACGGTTGTTTCCAACTGGGATGACGCCCC
TGCTCCAGTGATTAACCCGGCGAACATCTCAGTGGTTGGGGGAACGATGC
ACATGCTGCAAGAGAACGACATGTATACTCTTTCGGTTGTCAACCCATAA
AACTGGAACTATGACCATAAACCTACCGAGTATGGTGCTCGACGGGCTCA
TGTGAACGCCATGCAACGGTCCAGAAAATATTCGCGATCAATTTGCCTAG
CAGGGTTGACAAGCGCGACAATCTTGTCCTCGGTTCTTCAGTTAGTGGGT
TTAATATCGACTGGGTAAACGGTATCACTCCCGACGAGGTTGACCCCAGG
ACATACCCTTATATGTTTCTATTCACATCACAGAAACGGTTCGGCCGGTT
GATTCTCTATGCGCTGGGGGTGCTCGGGATCATCCTCATCCTTTGGCAGT
TGCCCTATGCTCGGCCCACCGTGCGGATAGGTGCTAGACGCGCCCGGTCA
CAGTTCGAGGCGATCAGGAACGAAACTTTGGGGAATTGTTCATGAAAGGA
TAGGAAGTGCCATGATCATGGAGGATGATGTCGACTGGGACGTCAATCTC
AAAACCCAGCTACAGAGCTTTGCTCTCGGTGTACGGGCTCTCCAAGGGGC
GGATAAGAAGGTGACGGCTTCGCCCTACGGTGATGACTGGGACATCATCT
GGCTTGGTCACTGTGGCATGGAATGTCGAACTAATGAGCCGTATTTCGTG
AGCTCAAATGATACAACCGTCCTTCCACCACATCACTTTCTGCCCTACTG
GCGCGATCCGCCTCCGTTCGGGATACCAGATTACACCCGTCTGACCTGCG
CCGTCAACGATGCTGTTTGCTCCATAGTCTATGCTGTGAGCTATCATGGT
GCTCAGAAGATCTTGTCTGCTCTTTCTGTGAACCCAACAGGCCTCGCAGA
CAAAATCGACATTGGCGCCCAGTTCGACGTATCGCTCGGCCGCATGTGCG
GTAATGGCTATCTCCGGTGCTTTGCGGTCTACCCATCCTTAACAGGTGGA
TATCATCCTGCTGGGCCCTCCTCGAAGGAATCTGATATTCATGGCGGGAA
TGAGGATGTCCATCCTGTCTCCAGTCACGGGGTTATGTACAGTACAATGC
TGAACATCAACCGCATACTAAACGGTGAGGATACGGTTGTTTCCAACTGG
GATGACGCCCCTGCTCCAGTGATTAACCCGGCGAACATCTCAGTGGTTGG
GGGAACGATGCACATGCTGCAAGAGAACGACATGTATACTCTTTCGGTTG
TCAACCCATAAAACTGGAACTATGACCATAAACCTACCGAGTATGGTGCT
CGACGGGCTCATGTGAACGCCATGCAACGGTCCAGAAAATATTCGCGATC
AATTTGCCTAGCAGGGTTGACAAGCGCGACAATCTTGTCCTCGGTTCTTC
AGTTAGTGGGTTTAATATCGACTGGGTAAACGGTATCACTCCCGACGAGG
TTGACCCCAGGACATACCCTTATATGTTTCTATTCACATCACAGAAACGG
TTCGGCCGGTTGATTCTCTATGCGCTGGGGGTGCTCGGGATCATCCTCAT
CCTTTGGCAGTTGCCCTATGCTCGGCCCACCGTGCGGATAGGTGCTAGAC
GCGCCCGGTCACAGTTCGAGGCGATCAGGAACGAAACTTTGGGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002745-T1.utr3p1 | KJC3_002745-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002745-T1.utr5p1 | KJC3_002745-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GT25 |
| DBxref | InterPro:IPR002654 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch2 | supercontig | ch2:3449479..3451200 - |
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