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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3469251..3472314+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002751-T1 ID=KJC3_002751-T1|Name=KJC3_002751-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3064bp|location=Sequence derived from alignment at ch2:3469251..3472314+ (Aspergillus niger KJC3)
CAATAATTCCATATCCACTTTTGGGTTGAAACTTGCACTACTTGCTTAGA
CTGACTGACTGCCTTGACTCTCTCCCTCTTTCTCTTCCACTTCCTCCTCT
CCCTTTGCCATTCCATTCCAATTCCCCCCATTTTCCAAATGCTCATTCTG
ATTCTCCGTCTCAACTGGTTCATTCTGCTGTGTGCTGACTGGTTGTGAAT
CCCTCCTTCTTTCCCTCCTTTCTTTTCTTTTTTACCCTTTTCCCTTTTCC
CTTTTCTCCTGTTTTCTCCTCCTTTCGCGTGCTTATCCCGCCTCTTCCTG
GCTCATTGTCTCTCACTCTCTGCCGCTATCAACGGGGACGGCGTTCGTGC
ATCGGTCGCCCTTGCATCCCCCATCATCCTGCTCGGGCTGTCCTGCTGCC
ACTCCTCCTACCATCCACCCTCCCTTGACATTTTCCTTTTTCTCTCTCGT
GACTCTGATTTGCCTTCTTCTGCGTGAGCTTTTTTGTCAACGTCCCCACT
AAGACCAGTCAATTCCCTCACCGGCTTTCCTCATCACTCCTTCGGGCATC
CGGTGCCCCTCGCCATTCTTCACCCTCGCGAATCCCTCCCTCCGGTCGTG
ACTGTGCTCTCCCTCCAGCGCTGGCCCACTTGAGACACATACCCTAGTCC
TACCTTTCGTCACTGATGGGGCCTGCGCCAACCTAGCGACTACCCTCCTT
TCCATCTCCTTATCGCCCTCTTATATCGTTCGCCGTCCCGCTCCGACGGT
ACGCACCTCTTCCCACCATGGGTGTCTCTCCGTCTGGCAATCATCATCGA
CGGCGGAGCTCAGTACTGGCGGGCGCTTCACAGTCAGCTCCAATCGAGCA
TCGAGACGATATACCAAGGGTCATTGGGGACGCTGCCGGCTCAAAACGAG
AGGAGCCCAAGTCCTCGCCGGCTGAGGACGCAGACATCTCGGACCTATCC
TCGATCGCAGAGAGCTTGGAGATGGATTATATCAGCTCAGACGACGACCT
CCATGATGACGAAGAAACGGGCCTCACAGCGAAGCAGAGACGCCAGAGGC
GCCGCAGAAGGCAGCAGCGGCGACAGTTGGATGCCCGTATCGCCGACGTC
AAGGCCTCGAAGCACGATACATTACCGTTGGGGTTCACAGATAGTGATGT
CTTCAGGAGGCTGTCCATTAATGCGGGATTGATCCTGCTGTGGTATTTCT
TTTCGCTGTCGATTTCAATTGTGAGTTTCTCTGGTGCGCGTATTCCATGG
CTCACATGCTAACCCCCGTCGGTGCTGGTAGTACAACAAGTGGATGTTCT
CCGATGACGATGTTGTCTTTCCTTTCCCCCTCTTCACCACGAGCTTGCAT
ATGGCCGTTCAGTTCACCTTCTCGTCGATACTCCTCTATTTGATACCCTC
CCTGCGTCCGAAAGCGCCCGCTGCATCCACACCTACAGGTTCGCCCGTGA
GCGAGCATGATCCCTTTGAGTCCCGACCGGTGGTCACCCGGTTCTTCTAC
CTTACACGTCTCGTCCCCTGCGGTGTGGCGACTTCCCTCGATATTGGACT
GGGAAACATGTCCCTGAAGTTCATTTCCCTTACCTTCCTCACCATGTGCA
AATCATCCGCCTTAGCATTCGTCCTTCTCTTTGCCTTCGTTTTCCGCCTC
GAAACCCCATCCGTCAAGTTGATCGTGATCATTGCTACGATGACCGTGGG
TGTTGTCATGATGGTCGCCGGCGAGACCGCTTTCAATGCGGTTGGATTTA
TCCTCGTCATTGCATCGGCGTTCTTTTCGGGCTTCCGATGGGGCCTCACC
CAGATTCTCCTCCTACGCCATCCCGCGACGGCGAACCCGTTCTCCACCCT
CTTCTTCCTTACGCCTGTGATGTTTGTCTCACTGATTGTCATTGCGCTGG
CGGTAGAGGGGCCGTTGGAGATCATCGCTGGCTTCCAAGCCCTGGCGGCT
GCCCGCGGGGGCCTGTTTGCTGTTTTCCTGCTGATCTTCCCTGGTATCCT
GGCTTTCTGCATGATTTCCTCTGAGTTTGCGCTCCTCAAGCGCTCTTCGG
TAGTGACGCTGAGCATTTGCGGCATCTTCAAGGAAGTCGTCACCATCAGT
GCTGCTGGGGTCATCTTCCACGATCAGCTCACTGCAGTCAACATTACGGG
CTTGGTGGTCACCATTGGCAGCATCGCGTCCTACAACTACATGAAGATCT
CTAAAATGCGCTCAGAAGCCCAGAAGGGCGCGTGGACACGCAGTCCCAAT
CTGGACTCTGAGGACGACTCCGATCCGACTGGGGAGCGCGGAGAGTACCG
ACGGATCCGTAACCCTGAAACGAGCACTTTCCAATCTCCGGGTATCCATG
TCGACGAGGACAATGTGAATATCACTCCTGAGGATGACTTGACCGCTGGC
GGTCGGCGCTCATTCCGTGTTCGTGCCAGCGGCGCTAGCAATGCGCTCGG
GTTAAGCATCAACACCACCAATCTCGGGGACCACGATAGAAATTTCTCCC
CTCGAGTGTCGGCCCCCTCGCCCTTGAAATCGGCGCCCCCAGTCATCACG
TCCCTGGAAGCTGAGCTTAATCGATCGGCTTCTGGCCCTAGCTTCGGAAG
CAAGCCCCAGACATCTCCAGAACGGGCTTCACCGGAAGGACGCTCAGCTA
GCTAGACGAGTAGTTCTGGTAATTGCTGTTTCATGCGTTTTTCACCATGG
TTCAAGGGACCACTGGTATGGTTCGACCTGGAATTTTGCTTCCCTACTTT
CCTTGATATCCAAAGACCCCTTTGTCGGTCTACAACCTCGTGGCATCAGC
GTTCGAGTTCGTCGATCGTCGCATCACGTTTCTGATTTGGATGGTCCTTA
TTTTATAACGGAGGATCTGATCAGCATGCCTGGGAATCGGCATGTCTGGA
GTACATTGGGCGTCCCGCACATATTGGCAGACGATGTCTGGTATAGACAG
TGATACCATGTTATCTATCTCTTAGCTCTAACGGAGCTTAATCGCATTGC
AGTCTACATAAATTAGTCTGATCCACTACACCACTACTCCAATACAATAC
TATATTAAAATGAC back to topCoding sequence (CDS) from alignment at ch2:3469251..3472314+ >KJC3_002751-T1 ID=KJC3_002751-T1|Name=KJC3_002751-T1|organism=Aspergillus niger KJC3|type=CDS|length=3654bp|location=Sequence derived from alignment at ch2:3469251..3472314+ (Aspergillus niger KJC3)
ATGGGTGTCTCTCCGTCTGGCAATCATCATCGACGGCGGAGCTCAGTACT
GGCGGGCGCTTCACAGTCAGCTCCAATCGAGCATCGAGACGATATACCAA
GGGTCATTGGGGACGCTGCCGGCTCAAAACGAGAGGAGCCCAAGTCCTCG
CCGGCTGAGGACGCAGACATCTCGGACCTATCCTCGATCGCAGAGAGCTT
GGAGATGGATTATATCAGCTCAGACGACGACCTCCATGATGACGAAGAAA
CGGGCCTCACAGCGAAGCAGAGACGCCAGAGGCGCCGCAGAAGGCAGCAG
CGGCGACAGTTGGATGCCCGTATCGCCGACGTCAAGGCCTCGAAGCACGA
TACATTACCGTTGGGGTTCACAGATAGTGATGTCTTCAGGAGGCTGTCCA
TTAATGCGGGATTGATCCTGCTGTGGTATTTCTTTTCGCTGTCGATTTCA
ATTTACAACAAGTGGATGTTCTCCGATGACGATGTTGTCTTTCCTTTCCC
CCTCTTCACCACGAGCTTGCATATGGCCGTTCAGTTCACCTTCTCGTCGA
TACTCCTCTATTTGATACCCTCCCTGCGTCCGAAAGCGCCCGCTGCATCC
ACACCTACAGGTTCGCCCGTGAGCGAGCATGATCCCTTTGAGTCCCGACC
GGTGGTCACCCGGTTCTTCTACCTTACACGTCTCGTCCCCTGCGGTGTGG
CGACTTCCCTCGATATTGGACTGGGAAACATGTCCCTGAAGTTCATTTCC
CTTACCTTCCTCACCATGTGCAAATCATCCGCCTTAGCATTCGTCCTTCT
CTTTGCCTTCGTTTTCCGCCTCGAAACCCCATCCGTCAAGTTGATCGTGA
TCATTGCTACGATGACCGTGGGTGTTGTCATGATGGTCGCCGGCGAGACC
GCTTTCAATGCGGTTGGATTTATCCTCGTCATTGCATCGGCGTTCTTTTC
GGGCTTCCGATGGGGCCTCACCCAGATTCTCCTCCTACGCCATCCCGCGA
CGGCGAACCCGTTCTCCACCCTCTTCTTCCTTACGCCTGTGATGTTTGTC
TCACTGATTGTCATTGCGCTGGCGGTAGAGGGGCCGTTGGAGATCATCGC
TGGCTTCCAAGCCCTGGCGGCTGCCCGCGGGGGCCTGTTTGCTGTTTTCC
TGCTGATCTTCCCTGGTATCCTGGCTTTCTGCATGATTTCCTCTGAGTTT
GCGCTCCTCAAGCGCTCTTCGGTAGTGACGCTGAGCATTTGCGGCATCTT
CAAGGAAGTCGTCACCATCAGTGCTGCTGGGGTCATCTTCCACGATCAGC
TCACTGCAGTCAACATTACGGGCTTGGTGGTCACCATTGGCAGCATCGCG
TCCTACAACTACATGAAGATCTCTAAAATGCGCTCAGAAGCCCAGAAGGG
CGCGTGGACACGCAGTCCCAATCTGGACTCTGAGGACGACTCCGATCCGA
CTGGGGAGCGCGGAGAGTACCGACGGATCCGTAACCCTGAAACGAGCACT
TTCCAATCTCCGGGTATCCATGTCGACGAGGACAATGTGAATATCACTCC
TGAGGATGACTTGACCGCTGGCGGTCGGCGCTCATTCCGTGTTCGTGCCA
GCGGCGCTAGCAATGCGCTCGGGTTAAGCATCAACACCACCAATCTCGGG
GACCACGATAGAAATTTCTCCCCTCGAGTGTCGGCCCCCTCGCCCTTGAA
ATCGGCGCCCCCAGTCATCACGTCCCTGGAAGCTGAGCTTAATCGATCGG
CTTCTGGCCCTAGCTTCGGAAGCAAGCCCCAGACATCTCCAGAACGGGCT
TCACCGGAAGGACGCTCAGCTAGCTAGATGGGTGTCTCTCCGTCTGGCAA
TCATCATCGACGGCGGAGCTCAGTACTGGCGGGCGCTTCACAGTCAGCTC
CAATCGAGCATCGAGACGATATACCAAGGGTCATTGGGGACGCTGCCGGC
TCAAAACGAGAGGAGCCCAAGTCCTCGCCGGCTGAGGACGCAGACATCTC
GGACCTATCCTCGATCGCAGAGAGCTTGGAGATGGATTATATCAGCTCAG
ACGACGACCTCCATGATGACGAAGAAACGGGCCTCACAGCGAAGCAGAGA
CGCCAGAGGCGCCGCAGAAGGCAGCAGCGGCGACAGTTGGATGCCCGTAT
CGCCGACGTCAAGGCCTCGAAGCACGATACATTACCGTTGGGGTTCACAG
ATAGTGATGTCTTCAGGAGGCTGTCCATTAATGCGGGATTGATCCTGCTG
TGGTATTTCTTTTCGCTGTCGATTTCAATTTACAACAAGTGGATGTTCTC
CGATGACGATGTTGTCTTTCCTTTCCCCCTCTTCACCACGAGCTTGCATA
TGGCCGTTCAGTTCACCTTCTCGTCGATACTCCTCTATTTGATACCCTCC
CTGCGTCCGAAAGCGCCCGCTGCATCCACACCTACAGGTTCGCCCGTGAG
CGAGCATGATCCCTTTGAGTCCCGACCGGTGGTCACCCGGTTCTTCTACC
TTACACGTCTCGTCCCCTGCGGTGTGGCGACTTCCCTCGATATTGGACTG
GGAAACATGTCCCTGAAGTTCATTTCCCTTACCTTCCTCACCATGTGCAA
ATCATCCGCCTTAGCATTCGTCCTTCTCTTTGCCTTCGTTTTCCGCCTCG
AAACCCCATCCGTCAAGTTGATCGTGATCATTGCTACGATGACCGTGGGT
GTTGTCATGATGGTCGCCGGCGAGACCGCTTTCAATGCGGTTGGATTTAT
CCTCGTCATTGCATCGGCGTTCTTTTCGGGCTTCCGATGGGGCCTCACCC
AGATTCTCCTCCTACGCCATCCCGCGACGGCGAACCCGTTCTCCACCCTC
TTCTTCCTTACGCCTGTGATGTTTGTCTCACTGATTGTCATTGCGCTGGC
GGTAGAGGGGCCGTTGGAGATCATCGCTGGCTTCCAAGCCCTGGCGGCTG
CCCGCGGGGGCCTGTTTGCTGTTTTCCTGCTGATCTTCCCTGGTATCCTG
GCTTTCTGCATGATTTCCTCTGAGTTTGCGCTCCTCAAGCGCTCTTCGGT
AGTGACGCTGAGCATTTGCGGCATCTTCAAGGAAGTCGTCACCATCAGTG
CTGCTGGGGTCATCTTCCACGATCAGCTCACTGCAGTCAACATTACGGGC
TTGGTGGTCACCATTGGCAGCATCGCGTCCTACAACTACATGAAGATCTC
TAAAATGCGCTCAGAAGCCCAGAAGGGCGCGTGGACACGCAGTCCCAATC
TGGACTCTGAGGACGACTCCGATCCGACTGGGGAGCGCGGAGAGTACCGA
CGGATCCGTAACCCTGAAACGAGCACTTTCCAATCTCCGGGTATCCATGT
CGACGAGGACAATGTGAATATCACTCCTGAGGATGACTTGACCGCTGGCG
GTCGGCGCTCATTCCGTGTTCGTGCCAGCGGCGCTAGCAATGCGCTCGGG
TTAAGCATCAACACCACCAATCTCGGGGACCACGATAGAAATTTCTCCCC
TCGAGTGTCGGCCCCCTCGCCCTTGAAATCGGCGCCCCCAGTCATCACGT
CCCTGGAAGCTGAGCTTAATCGATCGGCTTCTGGCCCTAGCTTCGGAAGC
AAGCCCCAGACATCTCCAGAACGGGCTTCACCGGAAGGACGCTCAGCTAG
CTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002751-T1.utr5p1 | KJC3_002751-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002751-T1.utr3p1 | KJC3_002751-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262R8O |
| DBxref | InterPro:IPR004853 |
| DBxref | PFAM:PF03151 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3469251..3472314 + |
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