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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3545279..3546958- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002772-T1 ID=KJC3_002772-T1|Name=KJC3_002772-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1680bp|location=Sequence derived from alignment at ch2:3545279..3546958- (Aspergillus niger KJC3)
ATGTTGTGCATACTGACCAGCTTAGGAATCGCAACCTCTCCCACCGAAGG
AGAAGCTCATTGACTGCTCGTCCCCGGTTCCGCTTCTCCACGCTGCGCGG
CTTTCAGCAGCCCGAGTTGAGCAAGAAGCTGAACCAGGTCATCAAGAACG
AGAATGCTGCCATTGGTGCCCATGAGAAGGCCAGTCGCGAGCGCGTGTCC
ATTGCGTCCCAGCTGTCCGAATGGGGTGAATGGACTGACGACGATGCCGT
CGCCGATATCACCGACAAGGTGGCTGTCTTGATGGCTGAGATCGGCGAGC
AGGAGGATACCTTCGCTCAGTATCTCGAGGAATATCGCATCGTGCTGAAG
CAGATTCGCGACACGGAGAACTCGGTCCAGCCATCCCGCGACCATCGGGC
CAAGATTGCAGATGAGATCCAGAAACTCAAGTGGAAGGAGCCACATAGCC
ATAAGATCGATACCCTGGAACAGGAGCTGGTCAGGGCGGAGGCTCAGAGT
CTTGTTGCCGAGGCGCAGTTGACTAATGTGGTAAGTACTAATGTGAATGC
GGCATGCAATATCGCAGAAGCTAAAGATTCGAGTTCAGACCAGGTCGAAG
CTCAAGGAGGCATTGGATATTCACACTGCTGCGGTCATTGAACGAAACGA
GAAACAAATCTTGCTTGCTCGCCATGCGCGTCGCGTTTTGGAACTGCTGG
ACGACACCCCTGTCGTTCCTGGTGACTCTCCCCACGAGTACGATCGCACA
TCTTCTACGAGACAAATTCTCGAGGAGGCCGAGAATGATCTCCGTTCGTG
GGAGAGCACCACCGTACCCATCCAAAGTGCAGCAGGAGAGCTCCCAGACA
GTACCCTTCTACCAACTGCTGCCCGTAGAGCTGCCAATGGTCGCCCATCA
TATGCGGCTGACACAGCGGTCTCGGACTCTGTGCGGGACGTCAATGGTTC
TGCAGAAGCTTCTTACGTTAATGGCGCTGGTCCTGAGCGGTATACAAATG
GCACTAGTGTTGAGCAATATGCCAACGGTACTGGCCAGCAGAGATACGTT
AATGGCACCGGCCAAGAACGTTATGCCAACGGCACTGGCCAGGAAAGATA
TGTCAATGGGAACGCCGCGGAGCGACAAGTCAATGGAACTGGCCGGGAGC
AGTATACTAATGGTGGCACCACAGGAGCCTATGCCAATGGAGGCACTGCG
CGATATGTCGAGGGAGTCGCGCCGGAGGAGTATGAGGATCGAAGTGCCAC
AGAAGAATACGCTGGCCGTGCTCAGGAACAGAGCGCCACCGGTTTTGCTG
AGCAGCAGTATACCAGTCGTGCTCAAGAGCCGGTGGCCGCCAGTGCTGGC
GAGGAGCGATACCCCGGTCGTCCACTAGGGCAGGTCTTCACCAGCGCTGC
TGATGAGCGGTATGCCACTGGTGGCACAGAGGGACCATCAGTCCCCGCTA
TTGAGGAACAGGCCACTCCTGCTGCTGCACAGGACCTATACTCCAGCCAG
ACAGGCCGGGATCAGGTGGTAGATGGCTCTGTCCCGGAGGAAACTCTGAA
AACACAGGACGAAGAGGAAGTGCCACGACCACCAGATCCACGACTCTCAT
ACACCTCGCGAGGCTCAGAAGCTCCGCAAATAATCAGCCCAGTCCCGGTG
CAGGCTCAGCCCGTGGCAGTCCCCATCTGA back to topCoding sequence (CDS) from alignment at ch2:3545279..3546958- >KJC3_002772-T1 ID=KJC3_002772-T1|Name=KJC3_002772-T1|organism=Aspergillus niger KJC3|type=CDS|length=4806bp|location=Sequence derived from alignment at ch2:3545279..3546958- (Aspergillus niger KJC3)
ACCAGGTCGAAGCTCAAGGAGGCATTGGATATTCACACTGCTGCGGTCAT
TGAACGAAACGAGAAACAAATCTTGCTTGCTCGCCATGCGCGTCGCGTTT
TGGAACTGCTGGACGACACCCCTGTCGTTCCTGGTGACTCTCCCCACGAG
TACGATCGCACATCTTCTACGAGACAAATTCTCGAGGAGGCCGAGAATGA
TCTCCGTTCGTGGGAGAGCACCACCGTACCCATCCAAAGTGCAGCAGGAG
AGCTCCCAGACAGTACCCTTCTACCAACTGCTGCCCGTAGAGCTGCCAAT
GGTCGCCCATCATATGCGGCTGACACAGCGGTCTCGGACTCTGTGCGGGA
CGTCAATGGTTCTGCAGAAGCTTCTTACGTTAATGGCGCTGGTCCTGAGC
GGTATACAAATGGCACTAGTGTTGAGCAATATGCCAACGGTACTGGCCAG
CAGAGATACGTTAATGGCACCGGCCAAGAACGTTATGCCAACGGCACTGG
CCAGGAAAGATATGTCAATGGGAACGCCGCGGAGCGACAAGTCAATGGAA
CTGGCCGGGAGCAGTATACTAATGGTGGCACCACAGGAGCCTATGCCAAT
GGAGGCACTGCGCGATATGTCGAGGGAGTCGCGCCGGAGGAGTATGAGGA
TCGAAGTGCCACAGAAGAATACGCTGGCCGTGCTCAGGAACAGAGCGCCA
CCGGTTTTGCTGAGCAGCAGTATACCAGTCGTGCTCAAGAGCCGGTGGCC
GCCAGTGCTGGCGAGGAGCGATACCCCGGTCGTCCACTAGGGCAGGTCTT
CACCAGCGCTGCTGATGAGCGGTATGCCACTGGTGGCACAGAGGGACCAT
CAGTCCCCGCTATTGAGGAACAGGCCACTCCTGCTGCTGCACAGGACCTA
TACTCCAGCCAGACAGGCCGGGATCAGGTGGTAGATGGCTCTGTCCCGGA
GGAAACTCTGAAAACACAGGACGAAGAGGAAGTGCCACGACCACCAGATC
CACGACTCTCATACACCTCGCGAGGCTCAGAAGCTCCGCAAATAATCAGC
CCAGTCCCGGTGCAGGCTCAGCCCGTGGCAGTCCCCATCTGAGAATCGCA
ACCTCTCCCACCGAAGGAGAAGCTCATTGACTGCTCGTCCCCGGTTCCGC
TTCTCCACGCTGCGCGGCTTTCAGCAGCCCGAGTTGAGCAAGAAGCTGAA
CCAGGTCATCAAGAACGAGAATGCTGCCATTGGTGCCCATGAGAAGGCCA
GTCGCGAGCGCGTGTCCATTGCGTCCCAGCTGTCCGAATGGGGTGAATGG
ACTGACGACGATGCCGTCGCCGATATCACCGACAAGGTGGCTGTCTTGAT
GGCTGAGATCGGCGAGCAGGAGGATACCTTCGCTCAGTATCTCGAGGAAT
ATCGCATCGTGCTGAAGCAGATTCGCGACACGGAGAACTCGGTCCAGCCA
TCCCGCGACCATCGGGCCAAGATTGCAGATGAGATCCAGAAACTCAAGTG
GAAGGAGCCACATAGCCATAAGATCGATACCCTGGAACAGGAGCTGGTCA
GGGCGGAGGCTCAGAGTCTTGTTGCCGAGGCGCAGTTGACTAATGTGATG
TTACCAGGTCGAAGCTCAAGGAGGCATTGGATATTCACACTGCTGCGGTC
ATTGAACGAAACGAGAAACAAATCTTGCTTGCTCGCCATGCGCGTCGCGT
TTTGGAACTGCTGGACGACACCCCTGTCGTTCCTGGTGACTCTCCCCACG
AGTACGATCGCACATCTTCTACGAGACAAATTCTCGAGGAGGCCGAGAAT
GATCTCCGTTCGTGGGAGAGCACCACCGTACCCATCCAAAGTGCAGCAGG
AGAGCTCCCAGACAGTACCCTTCTACCAACTGCTGCCCGTAGAGCTGCCA
ATGGTCGCCCATCATATGCGGCTGACACAGCGGTCTCGGACTCTGTGCGG
GACGTCAATGGTTCTGCAGAAGCTTCTTACGTTAATGGCGCTGGTCCTGA
GCGGTATACAAATGGCACTAGTGTTGAGCAATATGCCAACGGTACTGGCC
AGCAGAGATACGTTAATGGCACCGGCCAAGAACGTTATGCCAACGGCACT
GGCCAGGAAAGATATGTCAATGGGAACGCCGCGGAGCGACAAGTCAATGG
AACTGGCCGGGAGCAGTATACTAATGGTGGCACCACAGGAGCCTATGCCA
ATGGAGGCACTGCGCGATATGTCGAGGGAGTCGCGCCGGAGGAGTATGAG
GATCGAAGTGCCACAGAAGAATACGCTGGCCGTGCTCAGGAACAGAGCGC
CACCGGTTTTGCTGAGCAGCAGTATACCAGTCGTGCTCAAGAGCCGGTGG
CCGCCAGTGCTGGCGAGGAGCGATACCCCGGTCGTCCACTAGGGCAGGTC
TTCACCAGCGCTGCTGATGAGCGGTATGCCACTGGTGGCACAGAGGGACC
ATCAGTCCCCGCTATTGAGGAACAGGCCACTCCTGCTGCTGCACAGGACC
TATACTCCAGCCAGACAGGCCGGGATCAGGTGGTAGATGGCTCTGTCCCG
GAGGAAACTCTGAAAACACAGGACGAAGAGGAAGTGCCACGACCACCAGA
TCCACGACTCTCATACACCTCGCGAGGCTCAGAAGCTCCGCAAATAATCA
GCCCAGTCCCGGTGCAGGCTCAGCCCGTGGCAGTCCCCATCTGAGAATCG
CAACCTCTCCCACCGAAGGAGAAGCTCATTGACTGCTCGTCCCCGGTTCC
GCTTCTCCACGCTGCGCGGCTTTCAGCAGCCCGAGTTGAGCAAGAAGCTG
AACCAGGTCATCAAGAACGAGAATGCTGCCATTGGTGCCCATGAGAAGGC
CAGTCGCGAGCGCGTGTCCATTGCGTCCCAGCTGTCCGAATGGGGTGAAT
GGACTGACGACGATGCCGTCGCCGATATCACCGACAAGGTGGCTGTCTTG
ATGGCTGAGATCGGCGAGCAGGAGGATACCTTCGCTCAGTATCTCGAGGA
ATATCGCATCGTGCTGAAGCAGATTCGCGACACGGAGAACTCGGTCCAGC
CATCCCGCGACCATCGGGCCAAGATTGCAGATGAGATCCAGAAACTCAAG
TGGAAGGAGCCACATAGCCATAAGATCGATACCCTGGAACAGGAGCTGGT
CAGGGCGGAGGCTCAGAGTCTTGTTGCCGAGGCGCAGTTGACTAATGTGA
TGTTACCAGGTCGAAGCTCAAGGAGGCATTGGATATTCACACTGCTGCGG
TCATTGAACGAAACGAGAAACAAATCTTGCTTGCTCGCCATGCGCGTCGC
GTTTTGGAACTGCTGGACGACACCCCTGTCGTTCCTGGTGACTCTCCCCA
CGAGTACGATCGCACATCTTCTACGAGACAAATTCTCGAGGAGGCCGAGA
ATGATCTCCGTTCGTGGGAGAGCACCACCGTACCCATCCAAAGTGCAGCA
GGAGAGCTCCCAGACAGTACCCTTCTACCAACTGCTGCCCGTAGAGCTGC
CAATGGTCGCCCATCATATGCGGCTGACACAGCGGTCTCGGACTCTGTGC
GGGACGTCAATGGTTCTGCAGAAGCTTCTTACGTTAATGGCGCTGGTCCT
GAGCGGTATACAAATGGCACTAGTGTTGAGCAATATGCCAACGGTACTGG
CCAGCAGAGATACGTTAATGGCACCGGCCAAGAACGTTATGCCAACGGCA
CTGGCCAGGAAAGATATGTCAATGGGAACGCCGCGGAGCGACAAGTCAAT
GGAACTGGCCGGGAGCAGTATACTAATGGTGGCACCACAGGAGCCTATGC
CAATGGAGGCACTGCGCGATATGTCGAGGGAGTCGCGCCGGAGGAGTATG
AGGATCGAAGTGCCACAGAAGAATACGCTGGCCGTGCTCAGGAACAGAGC
GCCACCGGTTTTGCTGAGCAGCAGTATACCAGTCGTGCTCAAGAGCCGGT
GGCCGCCAGTGCTGGCGAGGAGCGATACCCCGGTCGTCCACTAGGGCAGG
TCTTCACCAGCGCTGCTGATGAGCGGTATGCCACTGGTGGCACAGAGGGA
CCATCAGTCCCCGCTATTGAGGAACAGGCCACTCCTGCTGCTGCACAGGA
CCTATACTCCAGCCAGACAGGCCGGGATCAGGTGGTAGATGGCTCTGTCC
CGGAGGAAACTCTGAAAACACAGGACGAAGAGGAAGTGCCACGACCACCA
GATCCACGACTCTCATACACCTCGCGAGGCTCAGAAGCTCCGCAAATAAT
CAGCCCAGTCCCGGTGCAGGCTCAGCCCGTGGCAGTCCCCATCTGAGAAT
CGCAACCTCTCCCACCGAAGGAGAAGCTCATTGACTGCTCGTCCCCGGTT
CCGCTTCTCCACGCTGCGCGGCTTTCAGCAGCCCGAGTTGAGCAAGAAGC
TGAACCAGGTCATCAAGAACGAGAATGCTGCCATTGGTGCCCATGAGAAG
GCCAGTCGCGAGCGCGTGTCCATTGCGTCCCAGCTGTCCGAATGGGGTGA
ATGGACTGACGACGATGCCGTCGCCGATATCACCGACAAGGTGGCTGTCT
TGATGGCTGAGATCGGCGAGCAGGAGGATACCTTCGCTCAGTATCTCGAG
GAATATCGCATCGTGCTGAAGCAGATTCGCGACACGGAGAACTCGGTCCA
GCCATCCCGCGACCATCGGGCCAAGATTGCAGATGAGATCCAGAAACTCA
AGTGGAAGGAGCCACATAGCCATAAGATCGATACCCTGGAACAGGAGCTG
GTCAGGGCGGAGGCTCAGAGTCTTGTTGCCGAGGCGCAGTTGACTAATGT
GATGTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR028245 |
| DBxref | InterPro:IPR027267 |
| DBxref | PFAM:PF13805 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3545279..3546958 - |
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