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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3568665..3570411+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002780-T1 ID=KJC3_002780-T1|Name=KJC3_002780-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1747bp|location=Sequence derived from alignment at ch2:3568665..3570411+ (Aspergillus niger KJC3)
ATCTCCACCTCATCTATATTCCCCCCTATACCTCTTAATCATCCTATAAT
CATCTTGTTTTGTTCTATCAATCACTTCTCTATTCTTCCCTTCTATCTTT
ATTTTACCCTCCGATATGCTCTCCTAATTCAATCAATCAACCAACCAATC
AATCAATCAATCATCCCACAATGTCCACCACCTCCGATCCCCCCTCCTCC
TCCCCCTCAACCCCCACTCACATCCGCATCTTCACCTTAAACTGCTGGGG
TCTCAAATACATCGCCAAACACCGACACGCACGTCTTGCCGAAATTGGTC
GCCAGCTCGCCATAGCCTCCCCACCGCCCGAAATCGTCGGTCTTCAAGAA
TGCTGGACACAACAAGACTACGAATCCATCCGTCAGCAAACCCGTCACAT
CCTCCCCTACGGCAAGTTCTACTTCGGCGGTATCTGGGGCGCCGGTCTGG
CCATTCTCTCCAAATGGCCCATCGAAGAAAGTAGCATGTTCGCATACCCG
CTCAATGGGCGTCCCACGGCCTTCTTCCGCGGCGACTGGTACGTCGGGAA
GGGCGTGGCATGTGCGCGCGTCCGTTTCGGACCTGGAGTCCAAGACGTCG
CGGAGGTGTTCTGCACGCATCTTCACGCCCCCTACGAGCGAGAACCCAAC
GATTCATACATCTGTCATCGAACGGCGCAGGCGTGGGAAATCGCGAAACT
AATGCGCGGGGCCGCGGAGCGCGGACATTTGGTTATCGGTCTGGGCGACT
TCAACATGCTGCCATCGTCATTCGCCCATCAATTGATCCAGGCTCACAGC
CCCGTCCGGGATGCATGGCAGGTCCTGCATCCCGATTCGTCGGTCGGGGC
GGCCATTGACCCCGTCGAGCAGAAACGGGGTAAGCCCATACCTTCAGCGG
AGTACAATATTACCGAGAACGGCGCCACCTGCGATGGGAAATTCAATACC
TGGCGCTGGTCCAAAGAGGACCAGAAGCGCCTCGAGAAAGGCCAAGACAT
CGTGGTTGATAAAGATGCCCCATGCCCCAAAGGCAAACGCCTCGATTACA
TCTTCGTCGGAGACGGCAACTACCCCCCATTATACCCGGCACCGCGCTGG
TCCGTCGAATCCACCCGACTCTCAATGACAGAGCGCCACCCTACTCTCCG
CTGCTCCCTGAGCGACCACTTCGCCGTCGAGGCTGTAATCACTCGTGTCC
CGTCAGAGAAAGTCGACAACGACACCACAATTAGCCACCAATCCCCAGTC
CCCAACACTGCTCTCACGCCTGATACCTACGACCGCATCATCGACATGAT
CCACACCTACGTGCGCCGCGAACGGTCTCAGCGACGCTGGCGCGTAGCGC
ATTTCCTAGCCTCAGTGATTATATCCATCGGCTGCTTCATCGGAGTGTGG
TGGACAGGCGACCATCTACCTTATGTAGCGTTCATTTTGGTCCTTGTGAG
CACGTTGAGCTTCGGAGCCGGGATTCTGGATGGGTTGATTGGGGGGTTGT
TTATGTCGAGTGAGTTGCGCGCGTTGAAGGAGTTTGAGTGGGAGGTGAGG
AATGCGAAGATGATTGCTGAGGCGGTCGGGGGCAAGGGGGAGAAGGTGGA
GTAGGTGCTCTCTGGGAATTTTGGGTATATGTACTTTTGTTCTGTGTATA
CGTATAGTATGTAAATTTGAGGAGGGAATGAGATGGTGTACATGCTTTCC
TGGCAGTATAGTAGGTCATGTAGCGTGCGCTTAGTGGTCCACTGTGG back to topCoding sequence (CDS) from alignment at ch2:3568665..3570411+ >KJC3_002780-T1 ID=KJC3_002780-T1|Name=KJC3_002780-T1|organism=Aspergillus niger KJC3|type=CDS|length=1434bp|location=Sequence derived from alignment at ch2:3568665..3570411+ (Aspergillus niger KJC3)
ATGTCCACCACCTCCGATCCCCCCTCCTCCTCCCCCTCAACCCCCACTCA
CATCCGCATCTTCACCTTAAACTGCTGGGGTCTCAAATACATCGCCAAAC
ACCGACACGCACGTCTTGCCGAAATTGGTCGCCAGCTCGCCATAGCCTCC
CCACCGCCCGAAATCGTCGGTCTTCAAGAATGCTGGACACAACAAGACTA
CGAATCCATCCGTCAGCAAACCCGTCACATCCTCCCCTACGGCAAGTTCT
ACTTCGGCGGTATCTGGGGCGCCGGTCTGGCCATTCTCTCCAAATGGCCC
ATCGAAGAAAGTAGCATGTTCGCATACCCGCTCAATGGGCGTCCCACGGC
CTTCTTCCGCGGCGACTGGTACGTCGGGAAGGGCGTGGCATGTGCGCGCG
TCCGTTTCGGACCTGGAGTCCAAGACGTCGCGGAGGTGTTCTGCACGCAT
CTTCACGCCCCCTACGAGCGAGAACCCAACGATTCATACATCTGTCATCG
AACGGCGCAGGCGTGGGAAATCGCGAAACTAATGCGCGGGGCCGCGGAGC
GCGGACATTTGGTTATCGGTCTGGGCGACTTCAACATGCTGCCATCGTCA
TTCGCCCATCAATTGATCCAGGCTCACAGCCCCGTCCGGGATGCATGGCA
GGTCCTGCATCCCGATTCGTCGGTCGGGGCGGCCATTGACCCCGTCGAGC
AGAAACGGGGTAAGCCCATACCTTCAGCGGAGTACAATATTACCGAGAAC
GGCGCCACCTGCGATGGGAAATTCAATACCTGGCGCTGGTCCAAAGAGGA
CCAGAAGCGCCTCGAGAAAGGCCAAGACATCGTGGTTGATAAAGATGCCC
CATGCCCCAAAGGCAAACGCCTCGATTACATCTTCGTCGGAGACGGCAAC
TACCCCCCATTATACCCGGCACCGCGCTGGTCCGTCGAATCCACCCGACT
CTCAATGACAGAGCGCCACCCTACTCTCCGCTGCTCCCTGAGCGACCACT
TCGCCGTCGAGGCTGTAATCACTCGTGTCCCGTCAGAGAAAGTCGACAAC
GACACCACAATTAGCCACCAATCCCCAGTCCCCAACACTGCTCTCACGCC
TGATACCTACGACCGCATCATCGACATGATCCACACCTACGTGCGCCGCG
AACGGTCTCAGCGACGCTGGCGCGTAGCGCATTTCCTAGCCTCAGTGATT
ATATCCATCGGCTGCTTCATCGGAGTGTGGTGGACAGGCGACCATCTACC
TTATGTAGCGTTCATTTTGGTCCTTGTGAGCACGTTGAGCTTCGGAGCCG
GGATTCTGGATGGGTTGATTGGGGGGTTGTTTATGTCGAGTGAGTTGCGC
GCGTTGAAGGAGTTTGAGTGGGAGGTGAGGAATGCGAAGATGATTGCTGA
GGCGGTCGGGGGCAAGGGGGAGAAGGTGGAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002780-T1.utr5p1 | KJC3_002780-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002780-T1.utr3p1 | KJC3_002780-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263A64 |
| DBxref | InterPro:IPR005135 |
| DBxref | InterPro:IPR036691 |
| DBxref | PFAM:PF03372 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3568665..3570411 + |
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