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KJC3_002805-T1, KJC3_002805-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002805-T1
Unique NameKJC3_002805-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3630626..3631744-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002805-T1 ID=KJC3_002805-T1|Name=KJC3_002805-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1119bp|location=Sequence derived from alignment at ch2:3630626..3631744- (Aspergillus niger KJC3)
CCTAAGTCTCCTCTATCTACTGTCAATATCCAACAATCCATACTCTGAAA
ATGACGACAGGCAGCTGCTTCTGCGGAAACATCCAAGTTGAGTTTAGCGG
CGAGCCTATGATAGTCGTTAGTGTTTATCCTCTTGCATTCTCACAATTCA
ACACTGCTAATTGTCTTCTTCTTTTTCATACCTAGGCCATATGTCACTGC
CACGACTGTCGCAAAATCACCGGCACTCTGTATTCCTACAATTTTGTGTT
CAAAAGTGATAGCTTCAAAATATCAGGGAGTCCCAAAGAGCTACCGAAGA
CATGCGACAGCGGAGGTCGGATCATGAACCACTTCTGTGGGGACTGTGGT
ATGTTGGAGTAATATTTCTCAACTCTTGAATTGTGGTAATATTAAAGCTC
GATGTTTGTAGGTACGCCCCTTTACGGACACAAAGTAAACGCCGATGGAA
GTGCGGGTGAACTCAAGATCGTGCGTGCTGGTATCTTCGATGATGAGATA
GTGAATAAGTATAAGCCAGGACATGAAGTATATACCGGAAGACGGGTATG
TTGGCTTGATCCTGCTGATGGAGCTGAGCAGTTCGAGGGGATGGCGCCTC
TGTGAGGCCTTAAGATGCTGGGATGGGTACTGCTTACGAGAGGATCATTT
TCCTCGTTTAATGATAGAGAACGTTATCTTTAGACACTAAATGGCTCTAT
ATATTTGCTATTTTAGTTCAACTGTTTCATGATTCGGTCTTAAAGTCTAA
CGTCACAACTGTATTGGGGTGAGTGTCCCAGATCTATGAAGATTGTGGTC
TATTTAAAGTGCCTTAATGCTATTAACCTTAGATTGCAGCTTCCGGGCGG
AAAGTGGAGCCGGGATCTGGCTACTGGGTGTCAAAGCCCATGAGTCTCGA
GGCGCATGTAACTCAAGGACCTTGGTGGACAGATCGAGGTTGATCTCATG
GAGCCACTGTCATAGCTTCTTGTATCACAGGGTCTGAAATGTCATTTGCA
AGGGGAGAGTGGTAGGCTGAGTCGTCAGCCACGTGCACAGGTTATTCCCG
AATGTGATTAAACTTTATCAGTGCGCATGCAAAAGATAGACAGATTTTTG
ATAGCTCTGAAGATCTAGC
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Coding sequence (CDS) from alignment at ch2:3630626..3631744-

>KJC3_002805-T1 ID=KJC3_002805-T1|Name=KJC3_002805-T1|organism=Aspergillus niger KJC3|type=CDS|length=1269bp|location=Sequence derived from alignment at ch2:3630626..3631744- (Aspergillus niger KJC3)
GTACGCCCCTTTACGGACACAAAGTAAACGCCGATGGAAGTGCGGGTGAA
CTCAAGATCGTGCGTGCTGGTATCTTCGATGATGAGATAGTGAATAAGTA
TAAGCCAGGACATGAAGTATATACCGGAAGACGGGTATGTTGGCTTGATC
CTGCTGATGGAGCTGAGCAGTTCGAGGGGATGGCGCCTCTGTGAGCCATA
TGTCACTGCCACGACTGTCGCAAAATCACCGGCACTCTGTATTCCTACAA
TTTTGTGTTCAAAAGTGATAGCTTCAAAATATCAGGGAGTCCCAAAGAGC
TACCGAAGACATGCGACAGCGGAGGTCGGATCATGAACCACTTCTGTGGG
GACTGTGATGACGACAGGCAGCTGCTTCTGCGGAAACATCCAAGTTGAGT
TTAGCGGCGAGCCTATGATAGTCGTACGCCCCTTTACGGACACAAAGTAA
ACGCCGATGGAAGTGCGGGTGAACTCAAGATCGTGCGTGCTGGTATCTTC
GATGATGAGATAGTGAATAAGTATAAGCCAGGACATGAAGTATATACCGG
AAGACGGGTATGTTGGCTTGATCCTGCTGATGGAGCTGAGCAGTTCGAGG
GGATGGCGCCTCTGTGAGCCATATGTCACTGCCACGACTGTCGCAAAATC
ACCGGCACTCTGTATTCCTACAATTTTGTGTTCAAAAGTGATAGCTTCAA
AATATCAGGGAGTCCCAAAGAGCTACCGAAGACATGCGACAGCGGAGGTC
GGATCATGAACCACTTCTGTGGGGACTGTGATGACGACAGGCAGCTGCTT
CTGCGGAAACATCCAAGTTGAGTTTAGCGGCGAGCCTATGATAGTCGTAC
GCCCCTTTACGGACACAAAGTAAACGCCGATGGAAGTGCGGGTGAACTCA
AGATCGTGCGTGCTGGTATCTTCGATGATGAGATAGTGAATAAGTATAAG
CCAGGACATGAAGTATATACCGGAAGACGGGTATGTTGGCTTGATCCTGC
TGATGGAGCTGAGCAGTTCGAGGGGATGGCGCCTCTGTGAGCCATATGTC
ACTGCCACGACTGTCGCAAAATCACCGGCACTCTGTATTCCTACAATTTT
GTGTTCAAAAGTGATAGCTTCAAAATATCAGGGAGTCCCAAAGAGCTACC
GAAGACATGCGACAGCGGAGGTCGGATCATGAACCACTTCTGTGGGGACT
GTGATGACGACAGGCAGCTGCTTCTGCGGAAACATCCAAGTTGAGTTTAG
CGGCGAGCCTATGATAGTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016846carbon-sulfur lyase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002805KJC3_002805Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002805-T1KJC3_002805-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002805-T1.cdsKJC3_002805-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002805-T1.utr3p1KJC3_002805-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002805-T1.exon3KJC3_002805-T1.exon3Aspergillus niger KJC3exon
KJC3_002805-T1.exon2KJC3_002805-T1.exon2Aspergillus niger KJC3exon
KJC3_002805-T1.exon1KJC3_002805-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002805-T1.utr5p1KJC3_002805-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011057
DBxrefInterPro:IPR006913
DBxrefPFAM:PF04828
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3630626..3631744 -
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