You are here

Home

KJC3_002815-T1, KJC3_002815-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002815-T1
Unique NameKJC3_002815-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3657479..3659138+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002815-T1 ID=KJC3_002815-T1|Name=KJC3_002815-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1660bp|location=Sequence derived from alignment at ch2:3657479..3659138+ (Aspergillus niger KJC3)
ATGGCTCTCCGCTCCATGCCGTGGGCTTCCATGTCAATATTATCTCTATT
TGGGGTTGGTGCAGCTTCAAGCCCCTGCACTGAAGGAACATTCTCATCTC
TCAACTTGAGCAACATCGATATACTTTCGCTTAATGTAACCGCTGCGCGC
AACTATGCCACCGGTGCTTCACTATCCAGTGGGACCACCTCAGCCCCCGT
AGGCCAAATGCCGTCGACAGTGGACATCTGCATCGTGTCCTTGCAGTACA
CGCATCCTGGCCAGAACGACATTGTCAATACCTATATCGGACTCCCTCTC
AATGACAGCAACTGGAACTCACGGTTTCTGATGGACGGGGGTGGTGGCTG
GGTAGCTGGAGGGCTTGACGAAATCATCGCTCCTGTTGCTTCCGGATACT
CATCCTCCTCGACCGATGGAGGGCATAATAGTACAGCCTCGACGGCAGAC
TGGGGCTTTGTGAGTGAAGGTAATACCAACTGGCCGGCGCTGTGGGATTT
CTCCAGCGTGGCACTAGGCGAGGCAGCTGTACTGGGAAAGCTGGCTACGG
AGATCTACTTTGGTTCGCCGCCCAAGTACTCGTACTGGAATGGATGTTCC
ACTGGTGGTCGACAGGGGCATATGATGGCCCAGAGATTCCCGACTTACTT
TGATGGTATTGTAGGAGGCTCCCCGGCTATCAATTGGGACAAATTTCAGC
TGGCTGAATTCTGGCCTGATTTTCTGGCGCAACTTCTTGGTGTGTTGACT
ACCAATGCCTCAACTAGGGATCCGTGCTAATCAATACCTGACAGATACGC
AGCCGCCTGCATGTCTCCTCGATGCATTTACGGATGCTGCCATTGACGCC
TGTGACTTGCTGGACGGAGTGAAGGACGATATAATTTCTCTTCCGGGCCA
ATGCCATTTCGAAGCATCGTCGATTGTCGGTCAGACAGTAAATTGTAGCG
ATCCGGATGGACAAATTGCCATTACGGACAAAATGGCTGAGCTAGTCCAA
GGCATGTGGGATGGCCCAAGATCACTTGAAGATCAGTTCGAGTGGTACGG
GCTGGGTTATGATGCCGATCTAACAGCCCTCCTTACTACAACCTGCACGT
CAGTCGATAACTGTACTGTGACACCTTTTAGTATCAGCGCCGACTGGGCC
CGGATTTTCTTGGCCAGAAACTCATCCTTCAGTATCCAAGGCCTGACACG
ACAAGACTTTGACGATCTCTACCGCGAATCGGTTGACCAATATGCTTCGG
TTATTGGAACGCGCAATCTGGACTTGACAGAATATAAACTTGCAGGAGGA
AAGATGATCTCTTGGCACGGAATGCAGGACGAGTTGATCCCGACCAACGG
TACGGTGGACTATTACAGTCGGGTGATGGAACTGGACCCCAGCGTCGCAG
ACTACTACCGTTTCTTTCTGGCACCTGGAGTGGAACATTGCGAGGGGGGT
AATGGATTCGACCCCAATGATTATGTGTTCGAAACTCTCAGAGCGTGGGT
TGAGAATTCAACGGTGCCTGACACCCTGGAAGCCACTGCCGTGGCGGTGG
CTGGCTCGAACAGCAGCTCGACTCGAACGGCGTATCTTTGTCCTTATCCG
AAGATCTTTACCTATGTTGGCGGGGATCCGAACGATGCGGCGTCGTTTAG
CTGTGCTTGA
back to top

Coding sequence (CDS) from alignment at ch2:3657479..3659138+

>KJC3_002815-T1 ID=KJC3_002815-T1|Name=KJC3_002815-T1|organism=Aspergillus niger KJC3|type=CDS|length=3210bp|location=Sequence derived from alignment at ch2:3657479..3659138+ (Aspergillus niger KJC3)
ATGGCTCTCCGCTCCATGCCGTGGGCTTCCATGTCAATATTATCTCTATT
TGGGGTTGGTGCAGCTTCAAGCCCCTGCACTGAAGGAACATTCTCATCTC
TCAACTTGAGCAACATCGATATACTTTCGCTTAATGTAACCGCTGCGCGC
AACTATGCCACCGGTGCTTCACTATCCAGTGGGACCACCTCAGCCCCCGT
AGGCCAAATGCCGTCGACAGTGGACATCTGCATCGTGTCCTTGCAGTACA
CGCATCCTGGCCAGAACGACATTGTCAATACCTATATCGGACTCCCTCTC
AATGACAGCAACTGGAACTCACGGTTTCTGATGGACGGGGGTGGTGGCTG
GGTAGCTGGAGGGCTTGACGAAATCATCGCTCCTGTTGCTTCCGGATACT
CATCCTCCTCGACCGATGGAGGGCATAATAGTACAGCCTCGACGGCAGAC
TGGGGCTTTGTGAGTGAAGGTAATACCAACTGGCCGGCGCTGTGGGATTT
CTCCAGCGTGGCACTAGGCGAGGCAGCTGTACTGGGAAAGCTGGCTACGG
AGATCTACTTTGGTTCGCCGCCCAAGTACTCGTACTGGAATGGATGTTCC
ACTGGTGGTCGACAGGGGCATATGATGGCCCAGAGATTCCCGACTTACTT
TGATGGTATTGTAGGAGGCTCCCCGGCTATCAATTGGGACAAATTTCAGC
TGGCTGAATTCTGGCCTGATTTTCTGGCGCAACTTCTTGATACGCAGCCG
CCTGCATGTCTCCTCGATGCATTTACGGATGCTGCCATTGACGCCTGTGA
CTTGCTGGACGGAGTGAAGGACGATATAATTTCTCTTCCGGGCCAATGCC
ATTTCGAAGCATCGTCGATTGTCGGTCAGACAGTAAATTGTAGCGATCCG
GATGGACAAATTGCCATTACGGACAAAATGGCTGAGCTAGTCCAAGGCAT
GTGGGATGGCCCAAGATCACTTGAAGATCAGTTCGAGTGGTACGGGCTGG
GTTATGATGCCGATCTAACAGCCCTCCTTACTACAACCTGCACGTCAGTC
GATAACTGTACTGTGACACCTTTTAGTATCAGCGCCGACTGGGCCCGGAT
TTTCTTGGCCAGAAACTCATCCTTCAGTATCCAAGGCCTGACACGACAAG
ACTTTGACGATCTCTACCGCGAATCGGTTGACCAATATGCTTCGGTTATT
GGAACGCGCAATCTGGACTTGACAGAATATAAACTTGCAGGAGGAAAGAT
GATCTCTTGGCACGGAATGCAGGACGAGTTGATCCCGACCAACGGTACGG
TGGACTATTACAGTCGGGTGATGGAACTGGACCCCAGCGTCGCAGACTAC
TACCGTTTCTTTCTGGCACCTGGAGTGGAACATTGCGAGGGGGGTAATGG
ATTCGACCCCAATGATTATGTGTTCGAAACTCTCAGAGCGTGGGTTGAGA
ATTCAACGGTGCCTGACACCCTGGAAGCCACTGCCGTGGCGGTGGCTGGC
TCGAACAGCAGCTCGACTCGAACGGCGTATCTTTGTCCTTATCCGAAGAT
CTTTACCTATGTTGGCGGGGATCCGAACGATGCGGCGTCGTTTAGCTGTG
CTTGAATGGCTCTCCGCTCCATGCCGTGGGCTTCCATGTCAATATTATCT
CTATTTGGGGTTGGTGCAGCTTCAAGCCCCTGCACTGAAGGAACATTCTC
ATCTCTCAACTTGAGCAACATCGATATACTTTCGCTTAATGTAACCGCTG
CGCGCAACTATGCCACCGGTGCTTCACTATCCAGTGGGACCACCTCAGCC
CCCGTAGGCCAAATGCCGTCGACAGTGGACATCTGCATCGTGTCCTTGCA
GTACACGCATCCTGGCCAGAACGACATTGTCAATACCTATATCGGACTCC
CTCTCAATGACAGCAACTGGAACTCACGGTTTCTGATGGACGGGGGTGGT
GGCTGGGTAGCTGGAGGGCTTGACGAAATCATCGCTCCTGTTGCTTCCGG
ATACTCATCCTCCTCGACCGATGGAGGGCATAATAGTACAGCCTCGACGG
CAGACTGGGGCTTTGTGAGTGAAGGTAATACCAACTGGCCGGCGCTGTGG
GATTTCTCCAGCGTGGCACTAGGCGAGGCAGCTGTACTGGGAAAGCTGGC
TACGGAGATCTACTTTGGTTCGCCGCCCAAGTACTCGTACTGGAATGGAT
GTTCCACTGGTGGTCGACAGGGGCATATGATGGCCCAGAGATTCCCGACT
TACTTTGATGGTATTGTAGGAGGCTCCCCGGCTATCAATTGGGACAAATT
TCAGCTGGCTGAATTCTGGCCTGATTTTCTGGCGCAACTTCTTGATACGC
AGCCGCCTGCATGTCTCCTCGATGCATTTACGGATGCTGCCATTGACGCC
TGTGACTTGCTGGACGGAGTGAAGGACGATATAATTTCTCTTCCGGGCCA
ATGCCATTTCGAAGCATCGTCGATTGTCGGTCAGACAGTAAATTGTAGCG
ATCCGGATGGACAAATTGCCATTACGGACAAAATGGCTGAGCTAGTCCAA
GGCATGTGGGATGGCCCAAGATCACTTGAAGATCAGTTCGAGTGGTACGG
GCTGGGTTATGATGCCGATCTAACAGCCCTCCTTACTACAACCTGCACGT
CAGTCGATAACTGTACTGTGACACCTTTTAGTATCAGCGCCGACTGGGCC
CGGATTTTCTTGGCCAGAAACTCATCCTTCAGTATCCAAGGCCTGACACG
ACAAGACTTTGACGATCTCTACCGCGAATCGGTTGACCAATATGCTTCGG
TTATTGGAACGCGCAATCTGGACTTGACAGAATATAAACTTGCAGGAGGA
AAGATGATCTCTTGGCACGGAATGCAGGACGAGTTGATCCCGACCAACGG
TACGGTGGACTATTACAGTCGGGTGATGGAACTGGACCCCAGCGTCGCAG
ACTACTACCGTTTCTTTCTGGCACCTGGAGTGGAACATTGCGAGGGGGGT
AATGGATTCGACCCCAATGATTATGTGTTCGAAACTCTCAGAGCGTGGGT
TGAGAATTCAACGGTGCCTGACACCCTGGAAGCCACTGCCGTGGCGGTGG
CTGGCTCGAACAGCAGCTCGACTCGAACGGCGTATCTTTGTCCTTATCCG
AAGATCTTTACCTATGTTGGCGGGGATCCGAACGATGCGGCGTCGTTTAG
CTGTGCTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002815KJC3_002815Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002815-T1.exon1KJC3_002815-T1.exon1Aspergillus niger KJC3exon
KJC3_002815-T1.exon2KJC3_002815-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002815-T1.cdsKJC3_002815-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002815-T1KJC3_002815-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR011118
DBxrefPFAM:PF07519
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3657479..3659138 +
Powered by Drupal