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KJC3_002824-T1, KJC3_002824-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002824-T1
Unique NameKJC3_002824-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3681029..3684272-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002824-T1 ID=KJC3_002824-T1|Name=KJC3_002824-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3244bp|location=Sequence derived from alignment at ch2:3681029..3684272- (Aspergillus niger KJC3)
CGGGCGCGAGCCTGACTGCCTGAGAGTCATGTGCTCTGGGGAAGTCGGTC
GGTGTCGGTGTCTCTCCGCAATCTCGAGTCCCCCCGTTCTCTTCTCCATT
CCCCCCGAACTGGATCTCGTTTGCCTACCCTCACCGAACCGTTCTCCTCG
ATCGGTTCATATTAGATAATGTCTCTGCGCTGAGTCAGTTACACTGCTAG
TTACTGCACAGTCCCCGCTGGCATTGCGTTGCTGGCCTGCAGGAATTTCC
TAATCTACTCCGGACTGTATCCCGCCTTGGCCGGGAAAGGGAACGACAAT
GCCGATCCACCCAATCCCCGGAATCCTCCACCTCCACCTTCTCTGCCTCC
ACGCTTACGCTGGATCGCGGCCTCCGACTCTCGGCTGACCCGTCTTCGGT
CTTCAGCCTTCAGGGTTGCCTGCCTTGCTGTCCGATGGCTTTTCCTGAAC
GTGCTGGCCGGCTTGAACCGCCTCCCACGCTTGCAGCCACCTACCCGACT
ACGGTCACATTCGGTCATCCCGATGGAGACATACCGCGGAAGTCGAGATA
TCATTTGTTGTGCATCAATCAGGTCGGGTGGATTCTGGATCATTCTCTCG
CCCCCCTCCCCATCTGCCTCCTAATGGCTCGTTTCATGACCCCTCGACCC
TCCAGACCATGTGCTTGCCCCGGTTTTTTTTTTCCCATGCGACAGATGGG
CTCACGGCCAGCCGACTGACCCATGGGCAACGCCCCCCATGTCAGCTCCT
GGTGGACCGCCTTTTGCTGCATGCATCCAATCGCTAGTTCAGCTGAACCT
TGACCTAACCGGATATGCCTGTCTCTCCGCTAGTCAGAGGCCGGTCTAAT
CTCGCCTGGCATGGGTCTTCTTTGCTTGCCGTGCGACTCGGGTCGGAATT
GTCCCTCTACCACCCTTTAGGTTTGACAATTCAACCGGCCATCATGGCAG
TTCTCTGCGTCGACCCCGCGGCCTCTGCTCCTGTCTCACTGTGGTCCATT
TCATCTGGTGCCACCCGTTCCCGGGTTTCGCTTTCCTTAAATCCCCCGTC
TTTTCCCCGGCTTCTCCTGCGTCCTTCTCTTGCTCTCTCCGGTGGTTCCC
CGAGGTTTCTTTTTTCTTTCCCCCAGAATCTCCTGCCGTGAGCGGAACCA
GCTGGCATCATGGCTATCGGCAATCTTTACTTCATTGCGGCCATCGCCGT
CGTCGGCGGTGGTCTGTTCGGTTTCGATATCTCGTCGATGTCGGCCATCA
TCGAGACCGATGCCTATCTCTGTTACTTCAACCAGGCTCCTGTCACTTAC
GATGATGATGGCAAGAGGGTCTGTCAGGGCCCCAGCGCGAGTGTGCAGGG
TGGTATCACCGCCTCCATGGCTGGTGGTTCCTGGTTGGGCTCGTTGATCT
CGGGTTTCATCTCGGACAGGCTTGGTCGTCGTACTGCCATTCAGATCGGT
TCCATCATCTGGTATGTATCTGACACCGCTGCACCGTTATCTCTGCTAAC
AATGCATGGCTGTACAGGTGCATTGGATCCATCATTGTCTGTGCCTCCCA
GAACATTCCCATGCTGATCGTCGGTCGTATCATCAACGGTCTGAGTGTGG
GTATCTGCTCCGCTCAGGTGCCAGTGTATATTTCGGAGATTGTATGTCGG
TCCCATAATGCCTGCTGCTGCATGCGGTGCTAATCATTTAGGCTCCTCCA
ACCAAGCGTGGTCGTGTCGTCGGTCTGCAACAATGGGCTATTACCTGGGG
TATCCTGATCATGTTCTAGTAAGTCCTTATCCATCATCAGCTACCATGTC
ACATCTCACACGTGATGTAGCGTCTCCTATGGATGCAGCTTCATCAAGGG
TACGGCGGCCTTCCGGATTCCCTGGGGTCTGCAGATGATCCCTGCCGTGC
TATTGTTCCTGGGTATGATGCTCCTGCCTGAGTCACCCCGCTGGCTGGCA
CGCAAGGACCGATGGGAGGAGTGCCACGCTGTTTTGACCCTCGTCCACGG
TCAGGGAGACCCGAGCTCTCCCTTTGTGCAGCGTGAATATGAAGAGATCA
AGAGCATGTGCGAGTTTGAGCGCCAAAACGCGGATGTCTCCTACCTCGAG
CTGTTCAAGCCCAACATGCTTAACCGTACCCATGTGGGTGTTTTCGTTCA
GATCTGGTCTCAGTTGACTGGAATGAACGTCATGAGTAAGTTTCTTTCGA
GCCTGTATAGGTAGTCAGCAATGCTAACCGGTTCACTTCTAGTGTACTAC
ATCACCTACGTCTTTGCCATGGCCGGCTTGAAAGGTAACAACAACTTGAT
CTCCTCCAGTATCCAGTACGTGATCAACGTGTGCATGACTGTGCCGGCTC
TGGTGTGGGGTGATCAGTGGGGCCGTCGCCCGACCTTCTTGATCGGTTCC
CTCTTCATGATGATCTGGATGTACATTAATGCTGGTCTGATGGCCAGCTA
CGGTCATCCCGCGCCGCCCGGCGGTCTCAACAACGTGGAAGCCGAGTCCT
GGGTCATCCACGGCGCGCCCAGCAAGGCTGTCATTGCCAGTACCTACCTC
TTCGTAGCCTCATACGCCATCTCCTTCGGCCCCGCCAGCTGGGTGTACCC
GCCGGAACTCTTCCCTCTGCGTGTGCGCGGCAAGGCTACCGCCCTCTGCA
CTTCAGCCAACTGGGCCTTCAACTTCGCCCTCAGCTATTTTGTCCCCCCG
GCATTTGTCAACATCCAGTGGAAGGTCTACATCCTCTTCGGTGTCTTCTG
TACTGCCATGTTCTTGCACATTTTCTTCTTCTTTCCCGAGACCACGGGTA
AGACCCTGGAAGAGGTCGAGGCCATCTTCACTGATCCCAATGGTATTCCG
TACATCGGTACTCCCGCCTGGAAGACAAAGAACGAGTACTCGCGCGGTGC
ACACATTGAGGAGGTTGGCTTTGAAGATGAGAAGAAGGTTGCTGGTGGGC
AGACTATCCACCAGGAGGTCACGGCTACTCCGGATAAGATTGCTTGAGGT
GGATGATTAGTGATCGGTAATGATGGAGGGGGGTGGGGGCGGTTATAGAG
TATATTTATATATATGGGAAGAGGAGCTAACTAGACATGTATCAGCTTAA
TGCGAGGTCAATAGCATGTATATGTTTACTCAGCATACTTGTGTGAATTT
TGTCGATATTATGGTTTACAATCCCAACTTCATAATAGATACTTACTATT
ACCCCTAGATACACAGTACTAGTGGGTACTATCGTCACTCGCTA
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Coding sequence (CDS) from alignment at ch2:3681029..3684272-

>KJC3_002824-T1 ID=KJC3_002824-T1|Name=KJC3_002824-T1|organism=Aspergillus niger KJC3|type=CDS|length=2112bp|location=Sequence derived from alignment at ch2:3681029..3684272- (Aspergillus niger KJC3)
TGTACTACATCACCTACGTCTTTGCCATGGCCGGCTTGAAAGGTAACAAC
AACTTGATCTCCTCCAGTATCCAGTACGTGATCAACGTGTGCATGACTGT
GCCGGCTCTGGTGTGGGGTGATCAGTGGGGCCGTCGCCCGACCTTCTTGA
TCGGTTCCCTCTTCATGATGATCTGGATGTACATTAATGCTGGTCTGATG
GCCAGCTACGGTCATCCCGCGCCGCCCGGCGGTCTCAACAACGTGGAAGC
CGAGTCCTGGGTCATCCACGGCGCGCCCAGCAAGGCTGTCATTGCCAGTA
CCTACCTCTTCGTAGCCTCATACGCCATCTCCTTCGGCCCCGCCAGCTGG
GTGTACCCGCCGGAACTCTTCCCTCTGCGTGTGCGCGGCAAGGCTACCGC
CCTCTGCACTTCAGCCAACTGGGCCTTCAACTTCGCCCTCAGCTATTTTG
TCCCCCCGGCATTTGTCAACATCCAGTGGAAGGTCTACATCCTCTTCGGT
GTCTTCTGTACTGCCATGTTCTTGCACATTTTCTTCTTCTTTCCCGAGAC
CACGGGTAAGACCCTGGAAGAGGTCGAGGCCATCTTCACTGATCCCAATG
GTATTCCGTACATCGGTACTCCCGCCTGGAAGACAAAGAACGAGTACTCG
CGCGGTGCACACATTGAGGAGGTTGGCTTTGAAGATGAGAAGAAGGTTGC
TGGTGGGCAGACTATCCACCAGGAGGTCACGGCTACTCCGGATAAGATTG
CTTGAATGATCCCTGCCGTGCTATTGTTCCTGGGTATGATGCTCCTGCCT
GAGTCACCCCGCTGGCTGGCACGCAAGGACCGATGGGAGGAGTGCCACGC
TGTTTTGACCCTCGTCCACGGTCAGGGAGACCCGAGCTCTCCCTTTGTGC
AGCGTGAATATGAAGAGATCAAGAGCATGTGCGAGTTTGAGCGCCAAAAC
GCGGATGTCTCCTACCTCGAGCTGTTCAAGCCCAACATGCTTAACCGTAC
CCATGTGGGTGTTTTCGTTCAGATCTGGTCTCAGTTGACTGGAATGAACG
TCATGATGTACTACATCACCTACGTCTTTGCCATGGCCGGCTTGAAAGGT
AACAACAACTTGATCTCCTCCAGTATCCAGTACGTGATCAACGTGTGCAT
GACTGTGCCGGCTCTGGTGTGGGGTGATCAGTGGGGCCGTCGCCCGACCT
TCTTGATCGGTTCCCTCTTCATGATGATCTGGATGTACATTAATGCTGGT
CTGATGGCCAGCTACGGTCATCCCGCGCCGCCCGGCGGTCTCAACAACGT
GGAAGCCGAGTCCTGGGTCATCCACGGCGCGCCCAGCAAGGCTGTCATTG
CCAGTACCTACCTCTTCGTAGCCTCATACGCCATCTCCTTCGGCCCCGCC
AGCTGGGTGTACCCGCCGGAACTCTTCCCTCTGCGTGTGCGCGGCAAGGC
TACCGCCCTCTGCACTTCAGCCAACTGGGCCTTCAACTTCGCCCTCAGCT
ATTTTGTCCCCCCGGCATTTGTCAACATCCAGTGGAAGGTCTACATCCTC
TTCGGTGTCTTCTGTACTGCCATGTTCTTGCACATTTTCTTCTTCTTTCC
CGAGACCACGGGTAAGACCCTGGAAGAGGTCGAGGCCATCTTCACTGATC
CCAATGGTATTCCGTACATCGGTACTCCCGCCTGGAAGACAAAGAACGAG
TACTCGCGCGGTGCACACATTGAGGAGGTTGGCTTTGAAGATGAGAAGAA
GGTTGCTGGTGGGCAGACTATCCACCAGGAGGTCACGGCTACTCCGGATA
AGATTGCTTGAATGATCCCTGCCGTGCTATTGTTCCTGGGTATGATGCTC
CTGCCTGAGTCACCCCGCTGGCTGGCACGCAAGGACCGATGGGAGGAGTG
CCACGCTGTTTTGACCCTCGTCCACGGTCAGGGAGACCCGAGCTCTCCCT
TTGTGCAGCGTGAATATGAAGAGATCAAGAGCATGTGCGAGTTTGAGCGC
CAAAACGCGGATGTCTCCTACCTCGAGCTGTTCAAGCCCAACATGCTTAA
CCGTACCCATGTGGGTGTTTTCGTTCAGATCTGGTCTCAGTTGACTGGAA
TGAACGTCATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002824KJC3_002824Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002824-T1KJC3_002824-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002824-T1.cdsKJC3_002824-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002824-T1.utr3p1KJC3_002824-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002824-T1.exon3KJC3_002824-T1.exon3Aspergillus niger KJC3exon
KJC3_002824-T1.exon2KJC3_002824-T1.exon2Aspergillus niger KJC3exon
KJC3_002824-T1.exon1KJC3_002824-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002824-T1.utr5p2KJC3_002824-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_002824-T1.utr5p1KJC3_002824-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3681029..3684272 -
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