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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3689377..3691708- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002827-T1 ID=KJC3_002827-T1|Name=KJC3_002827-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2332bp|location=Sequence derived from alignment at ch2:3689377..3691708- (Aspergillus niger KJC3)
ATGACCAACCGTGACCCCGAATTTCGGCATCAGCTGGGCAAATTCCGACT
CGATCCCCTACCGATTCCTTCCCATCCTGCATCTCTGCCTCCTCCGCCGC
GTCCTGCTCACCCCAGTTCCGTCCCTTCTCCGCAGTCGCTGCCGCCGCCC
TCCGTGCCGCTTCAGCAGCAACAGCCACTCCCAACAGCACCACCGTCGCT
CCAACAGTCTCAGCAGCAGCCTCAACCAACCCCTGCCTCATCGCGATCCT
CCCCATCACATACCCCTCACCCTCGCAGTAAACGAGTATCCACAGCGTGC
GATTTCTGTCGGAAACGGAAAAAGAAATGTGACTTTCGATACCCCAACTG
CTCCGCGTGTACTCGCGCCGGTGTCCGCTGTACCATCCCTCCGCCGGGTC
CCCAGGTCGCCGCGGCGTCTGTTCCTCGAGATCAGTTAGAAAATCTACAA
AACCGGGTGAAATGGCTGGAGGATCTTTTGCGCCGCAAGACAGGCATCTC
TGTTGGCGACCGGCCCACGGGGACTGCGCTGGATGGCGAGGGCGATCCGG
ACTGGTGGTACCAGGTCCCAGCCTTGCTGATGACTCGCGGGAGTTCAACA
CATTCAACCCCCACGACGACTGCAACCGCGCTGTCCAGCAGCCCTGCTCC
TAGTTCCACCGCGGTAGGTACCGAGCTGCCTAACGTAGGCGAATTGTTTC
GCGACCAGTTGGAGCATCGACGACCCTCCATCGCGCGTCCGGTAGCATCC
GCTCCGCGCGTGATCCGGCTCGCCTCGCTGCCAGAGGCGAAATCAGTGGC
ATTGCGATACTTTGATAGTTTGGGGTACCAATATCCTTTTCTCCATCGCG
AGGAGTTCATGGCCCATCTCGATCGCATCTATGCGGGGGAGGTCCCCGCA
CCAGAGGTTCATCACTCGTATCACATCACCATCGCAACGGCCTTGTTGAT
CGGATCTGCCGACGAGTCACAGGCTGCCGAGTTCTATCATGTTAGCAATG
AGACAATGACCTTGGCTTTGCAGAATGAAGATCTGGCTGCTGTTCGAGCC
CTTCTGAGCGTCGCTGTGTATACAATGTTTGCGACCACGGGCCCCAGCGT
ATGGCACATCCTCGGGACTACTTTGCGTCTCGCCACCAGTCTCGGGCTGC
ATAAAGCCCGTCCAACGGGGAACGTGATAGAAGAGGAGATGGCCAAGCGG
GCGTTCTGGAGTCTCTACAACCTCGATCGACTGATCGCAAGCACCCTTGG
AAGGCCACTTGGAATTGCAGACGAGGATATCTCAATAGGCTTGCCGCGGG
AATTCAACGACAACTGGACAGAGACACCCGGAGCTAGTGCTATGACCATT
CCATTGCAGGTGGTGCGCCTGCGCCGGATATTCTCGCGCATCTACCGCTA
CTGTAAGTCTCTTCGAGTTTGCCCCCGGTGCTCACTGAGGTCTAGTCCCA
CTGACTGTGACAGTATTCAACAACCAACCGCCACCTCCTCCAACAGAGGT
TGCCATCACGCTCAGTCATTTCCGCCAGGAACTAGACGACTGGCGACAGG
AAGCACCGGTGTATGCGCCCGCGCTTCTGTACTCGACTAGCTACTACGAC
TATCTATACGCAACGACACTGCTCCTTATGTACCGGCCTAGTCCGCGTAA
TCCGACACCTGATGCAACGAGCATCGTGAGCTGTGGCAATGCCAGCATTC
AGGTCATTCGGTCCTACTGGGACAGCTATTCGCAGGGCAAGCTCAAGTGG
ATCTGGTTGACCCTCAGCCAGGTTTACTTTGCCGGCATCACAATCCTGTG
GTGTCTTAACCATAATCTTCAGTCTGTCCGTGAAGGCCGTGGTGCTGCGT
GGAAGCCTGAGGATCAGAGCATGCGACGGGCCATCCAGGCAGTAGTTGTT
CTGCTGGAGGAATTTGGCAAGAGACGTCCGGGAGTGGACCGACTGGCGGA
GACGTTTCGGAACCAGAGCACGATGATCTTCAGCCATCTGGCATACCAGC
AGGAGCAGGAGCAGCAGCAGCAGCAGCTTCAACAACAACAACAGCCACAA
CCACTCCCGCCTCCACCGCAGCCACAGCCACAGCCACCAATACCACACCA
TCAAACGCTCTTGGAACAGCAGCCGCAGCAACAACCACAACAGCAGCAGC
AGCAGCAACAGCAACAACACATTTTGGTAGCACCGCCGGTGCCCCTAGCG
CCGGTGCTGGATGACGTTCTCCTGGTCAATGGATCGGGGAACGTGCCCAT
GATTGATCCACAACTGGCGGAGCAATTATTCTATTCCTATGACTGGTTTC
AGGAGGAGATGGCGACATACTATACCCTTTAA back to topCoding sequence (CDS) from alignment at ch2:3689377..3691708- >KJC3_002827-T1 ID=KJC3_002827-T1|Name=KJC3_002827-T1|organism=Aspergillus niger KJC3|type=CDS|length=4542bp|location=Sequence derived from alignment at ch2:3689377..3691708- (Aspergillus niger KJC3)
TATTCAACAACCAACCGCCACCTCCTCCAACAGAGGTTGCCATCACGCTC
AGTCATTTCCGCCAGGAACTAGACGACTGGCGACAGGAAGCACCGGTGTA
TGCGCCCGCGCTTCTGTACTCGACTAGCTACTACGACTATCTATACGCAA
CGACACTGCTCCTTATGTACCGGCCTAGTCCGCGTAATCCGACACCTGAT
GCAACGAGCATCGTGAGCTGTGGCAATGCCAGCATTCAGGTCATTCGGTC
CTACTGGGACAGCTATTCGCAGGGCAAGCTCAAGTGGATCTGGTTGACCC
TCAGCCAGGTTTACTTTGCCGGCATCACAATCCTGTGGTGTCTTAACCAT
AATCTTCAGTCTGTCCGTGAAGGCCGTGGTGCTGCGTGGAAGCCTGAGGA
TCAGAGCATGCGACGGGCCATCCAGGCAGTAGTTGTTCTGCTGGAGGAAT
TTGGCAAGAGACGTCCGGGAGTGGACCGACTGGCGGAGACGTTTCGGAAC
CAGAGCACGATGATCTTCAGCCATCTGGCATACCAGCAGGAGCAGGAGCA
GCAGCAGCAGCAGCTTCAACAACAACAACAGCCACAACCACTCCCGCCTC
CACCGCAGCCACAGCCACAGCCACCAATACCACACCATCAAACGCTCTTG
GAACAGCAGCCGCAGCAACAACCACAACAGCAGCAGCAGCAGCAACAGCA
ACAACACATTTTGGTAGCACCGCCGGTGCCCCTAGCGCCGGTGCTGGATG
ACGTTCTCCTGGTCAATGGATCGGGGAACGTGCCCATGATTGATCCACAA
CTGGCGGAGCAATTATTCTATTCCTATGACTGGTTTCAGGAGGAGATGGC
GACATACTATACCCTTTAAATGACCAACCGTGACCCCGAATTTCGGCATC
AGCTGGGCAAATTCCGACTCGATCCCCTACCGATTCCTTCCCATCCTGCA
TCTCTGCCTCCTCCGCCGCGTCCTGCTCACCCCAGTTCCGTCCCTTCTCC
GCAGTCGCTGCCGCCGCCCTCCGTGCCGCTTCAGCAGCAACAGCCACTCC
CAACAGCACCACCGTCGCTCCAACAGTCTCAGCAGCAGCCTCAACCAACC
CCTGCCTCATCGCGATCCTCCCCATCACATACCCCTCACCCTCGCAGTAA
ACGAGTATCCACAGCGTGCGATTTCTGTCGGAAACGGAAAAAGAAATGTG
ACTTTCGATACCCCAACTGCTCCGCGTGTACTCGCGCCGGTGTCCGCTGT
ACCATCCCTCCGCCGGGTCCCCAGGTCGCCGCGGCGTCTGTTCCTCGAGA
TCAGTTAGAAAATCTACAAAACCGGGTGAAATGGCTGGAGGATCTTTTGC
GCCGCAAGACAGGCATCTCTGTTGGCGACCGGCCCACGGGGACTGCGCTG
GATGGCGAGGGCGATCCGGACTGGTGGTACCAGGTCCCAGCCTTGCTGAT
GACTCGCGGGAGTTCAACACATTCAACCCCCACGACGACTGCAACCGCGC
TGTCCAGCAGCCCTGCTCCTAGTTCCACCGCGGTAGGTACCGAGCTGCCT
AACGTAGGCGAATTGTTTCGCGACCAGTTGGAGCATCGACGACCCTCCAT
CGCGCGTCCGGTAGCATCCGCTCCGCGCGTGATCCGGCTCGCCTCGCTGC
CAGAGGCGAAATCAGTGGCATTGCGATACTTTGATAGTTTGGGGTACCAA
TATCCTTTTCTCCATCGCGAGGAGTTCATGGCCCATCTCGATCGCATCTA
TGCGGGGGAGGTCCCCGCACCAGAGGTTCATCACTCGTATCACATCACCA
TCGCAACGGCCTTGTTGATCGGATCTGCCGACGAGTCACAGGCTGCCGAG
TTCTATCATGTTAGCAATGAGACAATGACCTTGGCTTTGCAGAATGAAGA
TCTGGCTGCTGTTCGAGCCCTTCTGAGCGTCGCTGTGTATACAATGTTTG
CGACCACGGGCCCCAGCGTATGGCACATCCTCGGGACTACTTTGCGTCTC
GCCACCAGTCTCGGGCTGCATAAAGCCCGTCCAACGGGGAACGTGATAGA
AGAGGAGATGGCCAAGCGGGCGTTCTGGAGTCTCTACAACCTCGATCGAC
TGATCGCAAGCACCCTTGGAAGGCCACTTGGAATTGCAGACGAGGATATC
TCAATAGGCTTGCCGCGGGAATTCAACGACAACTGGACAGAGACACCCGG
AGCTAGTGCTATGACCATTCCATTGCAGGTGGTGCGCCTGCGCCGGATAT
TCTCGCGCATCTACCGCTACTTATTCAACAACCAACCGCCACCTCCTCCA
ACAGAGGTTGCCATCACGCTCAGTCATTTCCGCCAGGAACTAGACGACTG
GCGACAGGAAGCACCGGTGTATGCGCCCGCGCTTCTGTACTCGACTAGCT
ACTACGACTATCTATACGCAACGACACTGCTCCTTATGTACCGGCCTAGT
CCGCGTAATCCGACACCTGATGCAACGAGCATCGTGAGCTGTGGCAATGC
CAGCATTCAGGTCATTCGGTCCTACTGGGACAGCTATTCGCAGGGCAAGC
TCAAGTGGATCTGGTTGACCCTCAGCCAGGTTTACTTTGCCGGCATCACA
ATCCTGTGGTGTCTTAACCATAATCTTCAGTCTGTCCGTGAAGGCCGTGG
TGCTGCGTGGAAGCCTGAGGATCAGAGCATGCGACGGGCCATCCAGGCAG
TAGTTGTTCTGCTGGAGGAATTTGGCAAGAGACGTCCGGGAGTGGACCGA
CTGGCGGAGACGTTTCGGAACCAGAGCACGATGATCTTCAGCCATCTGGC
ATACCAGCAGGAGCAGGAGCAGCAGCAGCAGCAGCTTCAACAACAACAAC
AGCCACAACCACTCCCGCCTCCACCGCAGCCACAGCCACAGCCACCAATA
CCACACCATCAAACGCTCTTGGAACAGCAGCCGCAGCAACAACCACAACA
GCAGCAGCAGCAGCAACAGCAACAACACATTTTGGTAGCACCGCCGGTGC
CCCTAGCGCCGGTGCTGGATGACGTTCTCCTGGTCAATGGATCGGGGAAC
GTGCCCATGATTGATCCACAACTGGCGGAGCAATTATTCTATTCCTATGA
CTGGTTTCAGGAGGAGATGGCGACATACTATACCCTTTAAATGACCAACC
GTGACCCCGAATTTCGGCATCAGCTGGGCAAATTCCGACTCGATCCCCTA
CCGATTCCTTCCCATCCTGCATCTCTGCCTCCTCCGCCGCGTCCTGCTCA
CCCCAGTTCCGTCCCTTCTCCGCAGTCGCTGCCGCCGCCCTCCGTGCCGC
TTCAGCAGCAACAGCCACTCCCAACAGCACCACCGTCGCTCCAACAGTCT
CAGCAGCAGCCTCAACCAACCCCTGCCTCATCGCGATCCTCCCCATCACA
TACCCCTCACCCTCGCAGTAAACGAGTATCCACAGCGTGCGATTTCTGTC
GGAAACGGAAAAAGAAATGTGACTTTCGATACCCCAACTGCTCCGCGTGT
ACTCGCGCCGGTGTCCGCTGTACCATCCCTCCGCCGGGTCCCCAGGTCGC
CGCGGCGTCTGTTCCTCGAGATCAGTTAGAAAATCTACAAAACCGGGTGA
AATGGCTGGAGGATCTTTTGCGCCGCAAGACAGGCATCTCTGTTGGCGAC
CGGCCCACGGGGACTGCGCTGGATGGCGAGGGCGATCCGGACTGGTGGTA
CCAGGTCCCAGCCTTGCTGATGACTCGCGGGAGTTCAACACATTCAACCC
CCACGACGACTGCAACCGCGCTGTCCAGCAGCCCTGCTCCTAGTTCCACC
GCGGTAGGTACCGAGCTGCCTAACGTAGGCGAATTGTTTCGCGACCAGTT
GGAGCATCGACGACCCTCCATCGCGCGTCCGGTAGCATCCGCTCCGCGCG
TGATCCGGCTCGCCTCGCTGCCAGAGGCGAAATCAGTGGCATTGCGATAC
TTTGATAGTTTGGGGTACCAATATCCTTTTCTCCATCGCGAGGAGTTCAT
GGCCCATCTCGATCGCATCTATGCGGGGGAGGTCCCCGCACCAGAGGTTC
ATCACTCGTATCACATCACCATCGCAACGGCCTTGTTGATCGGATCTGCC
GACGAGTCACAGGCTGCCGAGTTCTATCATGTTAGCAATGAGACAATGAC
CTTGGCTTTGCAGAATGAAGATCTGGCTGCTGTTCGAGCCCTTCTGAGCG
TCGCTGTGTATACAATGTTTGCGACCACGGGCCCCAGCGTATGGCACATC
CTCGGGACTACTTTGCGTCTCGCCACCAGTCTCGGGCTGCATAAAGCCCG
TCCAACGGGGAACGTGATAGAAGAGGAGATGGCCAAGCGGGCGTTCTGGA
GTCTCTACAACCTCGATCGACTGATCGCAAGCACCCTTGGAAGGCCACTT
GGAATTGCAGACGAGGATATCTCAATAGGCTTGCCGCGGGAATTCAACGA
CAACTGGACAGAGACACCCGGAGCTAGTGCTATGACCATTCCATTGCAGG
TGGTGCGCCTGCGCCGGATATTCTCGCGCATCTACCGCTACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3689377..3691708 - |
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