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KJC3_002832-T1, KJC3_002832-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002832-T1
Unique NameKJC3_002832-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3706017..3708528+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002832-T1 ID=KJC3_002832-T1|Name=KJC3_002832-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2512bp|location=Sequence derived from alignment at ch2:3706017..3708528+ (Aspergillus niger KJC3)
CTTCGATCATGCATGATGCTGCTGATGATGCCTGACATTGACATCTGCCT
GCCCCAGAAGATATGAGGATCTATCCCGCCACATTCCTCTTTGCTCGAGC
TCAGATGCAGTCAGCCCCAGACTGCTGCACCCCTGCCATCCTCACCCTCT
TCCCCGACCGACCACCGCTGTCTCCCCGATGCCACTCCGTCCACCCGCTT
CCCCGCTCTCGTTGGAAACAATCTCGCCTTCCCCGCCAGACCTCGACTCC
GATCCCCTTATCGCTTCCGACGATGATCTAGATGACGATGACCGGGCGGC
TCGGGATCAGCGCATAGAGAAGCTGGCTCAGGCCTATTGCCATGGCACCC
CACTTTTCATCTTGTCCGCTTCGCTTCGCGGACCCTTCGACAACGGATGG
GCCAACCCCTGGAAGAAAGACAGGCAAAAGACTGGTGGTGGTCATGTAGG
GATACACTCGGAGCACTCAGAAAGACCAATTATCCCAGAGACGATCCCGC
AGAAGCGGCCCCTATACCGTGAATCGTTAGGCATATCTCGCTCAAAGTCT
GCTGTTCCTCTGTCCGACCCAACATACTCCTCGAAGAAAAGAGAGTCTCA
AGGTGGCACGGCGGGGGAACCCCCATCCAAACGGCCACGAGATAGTCGTG
GTCGGACATCAAGCTCGAACAATACACCAAAACCCATTGTACTGCACAAG
AGGACAATCGAGACAAGTGGACATTCGGATGCGTTGACCCCATTCCAGCA
TACAGAGCAGAGCTGGTTGAAGAGGGACCGAGCAGAAATCAACTTTCGAA
AAGTTGATCCCCCTACATCTCCAACAACTACAGTATCGTCTCGACATCGG
GAGGGAGGCCATTACACAATACAAGTTCCGGGCACAGATTATCGAGTCAC
AACGAAGAATATATTGAGAGCACGTACAGACTCCCGAGACGGGACTACCT
TTGACAGCCATGTTCCGGACAGTGTCAAAGCTCAGCTCACCAGTAGACAC
CCCGGAGTTCGACCGGAGACGGAGGCCCTTGAGAACTCAATATGTGTACT
TTCGTCAACGTCCCACCTATCGAAGTTCGAATTTCGTCGTAGGAAACGCT
CAGCTGATCCGGAACACGGCACCACATCGCCAGTCCCGATGCAGATGGAG
AATGAACAGGTCTCACATCAAACAACTGTTGTCGAAGACAGCCGGGTCTC
GAGTCAACCCGCACCAGTACCTCCAAACACAACTTCAATGCAGGCCATTG
AAGTTGATATGCAGGTGAACGAGGATAATTCGCATCATCCAAATGTATCC
GAACGTTCTGGTACTGTTGATCACCAGGGAAACTCTCAGTCACGGAAGGT
ATCATCAACCACCACTGCTGAAGGTGTCAATATCAGCGATAAATACCCTT
CCGCCCAGCGAGTGTCGGTAAATCCAGCTCTGGCTGAAAATGTTACATCA
CTGCAGACGATCTCCGCAGTGAAACCCAATTCAGAATGCGACAACGACAC
CATTCCAGATTTGCATTTCAACACGCAGGCAGCGCTATTGCATGCGCAGA
AATCCTTCCAAAATGATCTGGAGAGTCAAGTTCCCAACCCAGGAGAAACT
CATAAACAACCTTCATCACCCGCCAACGACATTACCCCCTTCCATCGAAT
GAACACTAGCAGAATCGGTAAATACTCCCGGGCCATCCATCCAGGAACTG
CGCATATGCCAATGAGCACACAATGCATCATCGACGCCGTCACGCCCTTC
ACCTTCAGCACAGAAAAGAAAGCCAGGTCCCGATTCATATCTCCCCAGAT
GCCATCGTCCAGTAGGATAGACCGAGGGACTGCCACCCCCAACACAGGCT
CGCCATTGTCCTCGGAATCGGAAGACGAGGATGAAGACGAAGACCCAACC
ATCCTCCCGCACAAATCCCCTGCCGCCCAACAACAAACCCCAGACGACAC
CCAAGAAGGCAGCGCATTGCCGATGGCTCTATCACATTCTCATCCGACCA
CCGTCCAAGACGGACAAGGTGTCGCCCCGGGTCCGGACAGCTTCAATCTA
AGTCAAGCAATTGCCGACGCAGGGAGCTGGTTACAGCAAAGCTTCGACAT
CAATCATGAAATCCAGCAGTGCAGGAGCAGCGCTAAGTCAAGACCGTCGT
CTTCGGCGGGGATCAGTCGCTCTGCGGTAACGTTGGATAGGTGAAGGGCG
GAAATTATTGCATGCATAGCAGGCGTATCGGGCTTTGTTTCCTTTACTTT
AATTGTTTAGTACGGGGTGGGTATATATATATATGTCTAAGTGGCTTTCT
TTGTATTTGCTTTTACAGTCTGGAACTATACTAGGTCATTCCACTTTGGA
CAGTGTGTTATTGTGCTAGGGCCAGTACATTTTGATACCTTGTGTATATA
ATATGTTATTTCCATATTGACAATTACATGATCTTGTCTGCAAATCGTGC
AGCGGCGACGCAGATTGCACATATTGTCAGGTACCTGGCTGTATCATTGG
GCTATGAGCCAA
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Coding sequence (CDS) from alignment at ch2:3706017..3708528+

>KJC3_002832-T1 ID=KJC3_002832-T1|Name=KJC3_002832-T1|organism=Aspergillus niger KJC3|type=CDS|length=2016bp|location=Sequence derived from alignment at ch2:3706017..3708528+ (Aspergillus niger KJC3)
ATGCCACTCCGTCCACCCGCTTCCCCGCTCTCGTTGGAAACAATCTCGCC
TTCCCCGCCAGACCTCGACTCCGATCCCCTTATCGCTTCCGACGATGATC
TAGATGACGATGACCGGGCGGCTCGGGATCAGCGCATAGAGAAGCTGGCT
CAGGCCTATTGCCATGGCACCCCACTTTTCATCTTGTCCGCTTCGCTTCG
CGGACCCTTCGACAACGGATGGGCCAACCCCTGGAAGAAAGACAGGCAAA
AGACTGGTGGTGGTCATGTAGGGATACACTCGGAGCACTCAGAAAGACCA
ATTATCCCAGAGACGATCCCGCAGAAGCGGCCCCTATACCGTGAATCGTT
AGGCATATCTCGCTCAAAGTCTGCTGTTCCTCTGTCCGACCCAACATACT
CCTCGAAGAAAAGAGAGTCTCAAGGTGGCACGGCGGGGGAACCCCCATCC
AAACGGCCACGAGATAGTCGTGGTCGGACATCAAGCTCGAACAATACACC
AAAACCCATTGTACTGCACAAGAGGACAATCGAGACAAGTGGACATTCGG
ATGCGTTGACCCCATTCCAGCATACAGAGCAGAGCTGGTTGAAGAGGGAC
CGAGCAGAAATCAACTTTCGAAAAGTTGATCCCCCTACATCTCCAACAAC
TACAGTATCGTCTCGACATCGGGAGGGAGGCCATTACACAATACAAGTTC
CGGGCACAGATTATCGAGTCACAACGAAGAATATATTGAGAGCACGTACA
GACTCCCGAGACGGGACTACCTTTGACAGCCATGTTCCGGACAGTGTCAA
AGCTCAGCTCACCAGTAGACACCCCGGAGTTCGACCGGAGACGGAGGCCC
TTGAGAACTCAATATGTGTACTTTCGTCAACGTCCCACCTATCGAAGTTC
GAATTTCGTCGTAGGAAACGCTCAGCTGATCCGGAACACGGCACCACATC
GCCAGTCCCGATGCAGATGGAGAATGAACAGGTCTCACATCAAACAACTG
TTGTCGAAGACAGCCGGGTCTCGAGTCAACCCGCACCAGTACCTCCAAAC
ACAACTTCAATGCAGGCCATTGAAGTTGATATGCAGGTGAACGAGGATAA
TTCGCATCATCCAAATGTATCCGAACGTTCTGGTACTGTTGATCACCAGG
GAAACTCTCAGTCACGGAAGGTATCATCAACCACCACTGCTGAAGGTGTC
AATATCAGCGATAAATACCCTTCCGCCCAGCGAGTGTCGGTAAATCCAGC
TCTGGCTGAAAATGTTACATCACTGCAGACGATCTCCGCAGTGAAACCCA
ATTCAGAATGCGACAACGACACCATTCCAGATTTGCATTTCAACACGCAG
GCAGCGCTATTGCATGCGCAGAAATCCTTCCAAAATGATCTGGAGAGTCA
AGTTCCCAACCCAGGAGAAACTCATAAACAACCTTCATCACCCGCCAACG
ACATTACCCCCTTCCATCGAATGAACACTAGCAGAATCGGTAAATACTCC
CGGGCCATCCATCCAGGAACTGCGCATATGCCAATGAGCACACAATGCAT
CATCGACGCCGTCACGCCCTTCACCTTCAGCACAGAAAAGAAAGCCAGGT
CCCGATTCATATCTCCCCAGATGCCATCGTCCAGTAGGATAGACCGAGGG
ACTGCCACCCCCAACACAGGCTCGCCATTGTCCTCGGAATCGGAAGACGA
GGATGAAGACGAAGACCCAACCATCCTCCCGCACAAATCCCCTGCCGCCC
AACAACAAACCCCAGACGACACCCAAGAAGGCAGCGCATTGCCGATGGCT
CTATCACATTCTCATCCGACCACCGTCCAAGACGGACAAGGTGTCGCCCC
GGGTCCGGACAGCTTCAATCTAAGTCAAGCAATTGCCGACGCAGGGAGCT
GGTTACAGCAAAGCTTCGACATCAATCATGAAATCCAGCAGTGCAGGAGC
AGCGCTAAGTCAAGACCGTCGTCTTCGGCGGGGATCAGTCGCTCTGCGGT
AACGTTGGATAGGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002832KJC3_002832Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002832-T1.utr5p1KJC3_002832-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002832-T1.exon1KJC3_002832-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002832-T1.cdsKJC3_002832-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002832-T1.utr3p1KJC3_002832-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002832-T1KJC3_002832-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3706017..3708528 +
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