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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3721732..3723165- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002839-T1 ID=KJC3_002839-T1|Name=KJC3_002839-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1434bp|location=Sequence derived from alignment at ch2:3721732..3723165- (Aspergillus niger KJC3)
ATGCACATGCTTCGCTTGGTTGTTTCTGGGCTTGGTTTTGTGGCATGCAC
GACTGCGCGCAACATCTTCAGCCTGCAGCTGGACCGTCAAGGAACTCATC
TACTGCCCCTTACTCACGGAGATGCTCCCGATCAGAAGCTTGTCGAGCGT
GGTTCTAGTCCTCGCTGTGGCCCTGATCATGGCAAGTGCCCTGAGGGTAA
ATGCTGCTCAACTGCTGGTGTGTCTATACTACTTCCCTTGTAGACCAATT
AGCCCGTACTGATGGCTACAGGTTATTGCGGGGACACCAAGAACCACTGC
AGCTCTCCTGACTGTCAGATCGATTTCGGTAATTGCGACGCTCACACAAC
TCCAGGAGGCCCTCCTACAGACAAGATTCCTCGGCCTCATATAGGCAACG
TTCCCTATGGCCCGAAATTCATTCGTTCGTGTACCACTCCAGGAACGATT
GCCCTGACCTTTGATGACGGCCCCAAGGAATACACTCAGGACCTTCTTGA
CCTTCTTGACAAGTATGAAGCAAAAGTCACATTCTTCGTTACAGGAAACA
ACAATGCCAAGGGTGAGATTGACAGTCCTGGGATGCCTTGGGCATCTTTG
ATTCAACGCATGTACCGCAGTGGCCACCAAGTTGCCAGCCATACTTGGTC
ACACCAAGATCTTAGTAAAGTCACGCAAGACCAGCGCCGGGTTCAGCTGC
TGTGGAACGAAGTCGCCCTACGCAATATTCTAGGGACAATCCCCACTTAC
ATGCGCCCACCGTACTCCAGCTGTACCGCGGAGTCCGGCTGTCTGGAAGA
TCTTGGCTCGCTTGGGTATCATGTCATCCTGTACGACATCGACACAGAAG
ATTACAGTCATGATAGCCCGGCTCTGATCCAACAATCCAAGGACATTTTC
GATCGCAACTTGGCCTCTCGGACGGATTTTGATAGGCCTTGGCTCGTCAT
CGCTCACGATGTCCATGAACAAACGGTCCACAACCTCACCGAGTACATGT
TGCAAAAGCTTATTGCAGAGGGCTATCGCGCCGTGACGGTTGGCGAGTGC
CTAGGAGATCCCCCTGAGCTCTGGTATCGTAAGGACGAGGCCTTCGACGA
TCGACAAACGCGAAAGTCTAAATCCAAGAATCCTGTTGCCAAGACTGTAT
CAGTTGACGGCATGTGTGGTGGGAACATCACCTGTCTCGGGTCGCGGTTT
GGACCTTGCTGCAGTGGCACTGGCTTTTGTGGCAGCATGTCTACATTTTG
CGGCGCCGGATGTCGACCTGATAATGGTAATTGTGGCGACAATGCTGGTA
CCGTCAAAGGTGGCGGTCCCAATGCTGGCTCTGGTAAACCTACGAAGCCG
GCGAAGTCCGAAGGAAAGTCGTTGCAGCTAAGCTCATCGGTGGCAATTGT
GATATTGTTATTCCTCGTGGTGTTGATGGATTAG back to topCoding sequence (CDS) from alignment at ch2:3721732..3723165- >KJC3_002839-T1 ID=KJC3_002839-T1|Name=KJC3_002839-T1|organism=Aspergillus niger KJC3|type=CDS|length=2760bp|location=Sequence derived from alignment at ch2:3721732..3723165- (Aspergillus niger KJC3)
GTTATTGCGGGGACACCAAGAACCACTGCAGCTCTCCTGACTGTCAGATC
GATTTCGGTAATTGCGACGCTCACACAACTCCAGGAGGCCCTCCTACAGA
CAAGATTCCTCGGCCTCATATAGGCAACGTTCCCTATGGCCCGAAATTCA
TTCGTTCGTGTACCACTCCAGGAACGATTGCCCTGACCTTTGATGACGGC
CCCAAGGAATACACTCAGGACCTTCTTGACCTTCTTGACAAGTATGAAGC
AAAAGTCACATTCTTCGTTACAGGAAACAACAATGCCAAGGGTGAGATTG
ACAGTCCTGGGATGCCTTGGGCATCTTTGATTCAACGCATGTACCGCAGT
GGCCACCAAGTTGCCAGCCATACTTGGTCACACCAAGATCTTAGTAAAGT
CACGCAAGACCAGCGCCGGGTTCAGCTGCTGTGGAACGAAGTCGCCCTAC
GCAATATTCTAGGGACAATCCCCACTTACATGCGCCCACCGTACTCCAGC
TGTACCGCGGAGTCCGGCTGTCTGGAAGATCTTGGCTCGCTTGGGTATCA
TGTCATCCTGTACGACATCGACACAGAAGATTACAGTCATGATAGCCCGG
CTCTGATCCAACAATCCAAGGACATTTTCGATCGCAACTTGGCCTCTCGG
ACGGATTTTGATAGGCCTTGGCTCGTCATCGCTCACGATGTCCATGAACA
AACGGTCCACAACCTCACCGAGTACATGTTGCAAAAGCTTATTGCAGAGG
GCTATCGCGCCGTGACGGTTGGCGAGTGCCTAGGAGATCCCCCTGAGCTC
TGGTATCGTAAGGACGAGGCCTTCGACGATCGACAAACGCGAAAGTCTAA
ATCCAAGAATCCTGTTGCCAAGACTGTATCAGTTGACGGCATGTGTGGTG
GGAACATCACCTGTCTCGGGTCGCGGTTTGGACCTTGCTGCAGTGGCACT
GGCTTTTGTGGCAGCATGTCTACATTTTGCGGCGCCGGATGTCGACCTGA
TAATGGTAATTGTGGCGACAATGCTGGTACCGTCAAAGGTGGCGGTCCCA
ATGCTGGCTCTGGTAAACCTACGAAGCCGGCGAAGTCCGAAGGAAAGTCG
TTGCAGCTAAGCTCATCGGTGGCAATTGTGATATTGTTATTCCTCGTGGT
GTTGATGGATTAGATGCACATGCTTCGCTTGGTTGTTTCTGGGCTTGGTT
TTGTGGCATGCACGACTGCGCGCAACATCTTCAGCCTGCAGCTGGACCGT
CAAGGAACTCATCTACTGCCCCTTACTCACGGAGATGCTCCCGATCAGAA
GCTTGTCGAGCGTGGTTCTAGTCCTCGCTGTGGCCCTGATCATGGCAAGT
GCCCTGAGGGTAAATGCTGCTCAACTGCTGGTTATTGCGGGGACACCAAG
AACCACTGCAGCTCTCCTGACTGTCAGATCGATTTCGGTAATTGCGACGC
TCACACAACTCCAGGAGGCCCTCCTACAGACAAGATTCCTCGGCCTCATA
TAGGCAACGTTCCCTATGGCCCGAAATTCATTCGTTCGTGTACCACTCCA
GGAACGATTGCCCTGACCTTTGATGACGGCCCCAAGGAATACACTCAGGA
CCTTCTTGACCTTCTTGACAAGTATGAAGCAAAAGTCACATTCTTCGTTA
CAGGAAACAACAATGCCAAGGGTGAGATTGACAGTCCTGGGATGCCTTGG
GCATCTTTGATTCAACGCATGTACCGCAGTGGCCACCAAGTTGCCAGCCA
TACTTGGTCACACCAAGATCTTAGTAAAGTCACGCAAGACCAGCGCCGGG
TTCAGCTGCTGTGGAACGAAGTCGCCCTACGCAATATTCTAGGGACAATC
CCCACTTACATGCGCCCACCGTACTCCAGCTGTACCGCGGAGTCCGGCTG
TCTGGAAGATCTTGGCTCGCTTGGGTATCATGTCATCCTGTACGACATCG
ACACAGAAGATTACAGTCATGATAGCCCGGCTCTGATCCAACAATCCAAG
GACATTTTCGATCGCAACTTGGCCTCTCGGACGGATTTTGATAGGCCTTG
GCTCGTCATCGCTCACGATGTCCATGAACAAACGGTCCACAACCTCACCG
AGTACATGTTGCAAAAGCTTATTGCAGAGGGCTATCGCGCCGTGACGGTT
GGCGAGTGCCTAGGAGATCCCCCTGAGCTCTGGTATCGTAAGGACGAGGC
CTTCGACGATCGACAAACGCGAAAGTCTAAATCCAAGAATCCTGTTGCCA
AGACTGTATCAGTTGACGGCATGTGTGGTGGGAACATCACCTGTCTCGGG
TCGCGGTTTGGACCTTGCTGCAGTGGCACTGGCTTTTGTGGCAGCATGTC
TACATTTTGCGGCGCCGGATGTCGACCTGATAATGGTAATTGTGGCGACA
ATGCTGGTACCGTCAAAGGTGGCGGTCCCAATGCTGGCTCTGGTAAACCT
ACGAAGCCGGCGAAGTCCGAAGGAAAGTCGTTGCAGCTAAGCTCATCGGT
GGCAATTGTGATATTGTTATTCCTCGTGGTGTTGATGGATTAGATGCACA
TGCTTCGCTTGGTTGTTTCTGGGCTTGGTTTTGTGGCATGCACGACTGCG
CGCAACATCTTCAGCCTGCAGCTGGACCGTCAAGGAACTCATCTACTGCC
CCTTACTCACGGAGATGCTCCCGATCAGAAGCTTGTCGAGCGTGGTTCTA
GTCCTCGCTGTGGCCCTGATCATGGCAAGTGCCCTGAGGGTAAATGCTGC
TCAACTGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
| GO:0008061 | chitin binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:CE4 |
| DBxref | InterPro:IPR011330 |
| DBxref | InterPro:IPR002509 |
| DBxref | InterPro:IPR036861 |
| DBxref | InterPro:IPR001002 |
| DBxref | PFAM:PF01522 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3721732..3723165 - |
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