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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3755437..3757745- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002850-T1 ID=KJC3_002850-T1|Name=KJC3_002850-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2309bp|location=Sequence derived from alignment at ch2:3755437..3757745- (Aspergillus niger KJC3)
CTCTTCCTAGATAGCATTAGAGGGTTTCATTCCGTAGATTAATCACTTGG
TAGTGCGTGAATCTCCACTGGGAGATTCGCTTTGGAGCCTGCCTTTGGCC
CGATCGCCCTTTCTGGCAACAACCGTCTTTGATCCAAAGGCAGTCGGTTC
GCTGCCGGTGCCTGTTGCTCGTGGGGATTTCCCATTTTCAATCCGTTTTT
CTCTTTCCCTTCGTCTCCCTCCCCTTTCCTCTTTATCCCCTCTGCAGTGA
GCGCGGAGTTCGCTGGTTTCTCGATCTTTTCCTCGCAAAATCCCCCCTAG
ACATCTGTTGGCACCTAACCGAGCAAAAAAAGTGTCATCGGGCAAGACCA
GTCCCCTGGAGCAATGTCGGACGACGAAGCAGACCCCGAGTTGATTGCTC
TTCTGCGCAAGACACTGGGATTGGGAGGCTCTTCAGATCCTCGAACCGCA
GAGACAAAAGTGCTGGAGAATGCGCAATACGCTTTCGACAATGCGATCGA
CGTCGCATTGAACCCCTCCAAGACGAAAGAAGCCGCGGAGACGATATGGA
ACCTGATGCAGAAGAAGGAATACTCCACACAGACATGGACGGAGCACGAA
CTACACCCAAAAACGAAAGACGAGAACACGGTCGACTTCATCTTCACTAT
GGATCTCCTCAATTTCAGTTTCTGGTCCGAGCTCCCTAGCGAGAAGCGTT
TCGCGATTGAGTACCGAGGAAGGAAGTGGACGGGGTACTGGAGCTTGGTT
GCTGCCTTACAGAGAGCTTTGGATGAGGGTAAGTCTATATGCGGCCTGTT
GAGCAAGACACGCCAGAAGCTGACTGTTATAGACATTCCAATCACCACTC
CGGAGTTTTGGACCAAGGAAGATGAATGTACCGAGGAACTCATCAAGCAT
GTCTTTCGCTCTGCCACCGATGAAGAGATTCCTATGCTTCAGGAACGCCT
TCAATGCCTGCGAGAGGCAGGTCGCGTTCTTTGCAGAGTATGTCTTTCAC
CATGTTTTACTTCCCCCGCATCTGGTGCTAATGAAATCCTTGTCTGTAGG
AGTATGAAGGTAGTTTTGTGAACTGCATCTACAACTCTAACTACTCTGCG
GCTTCGCTGGTCAATTTGCTAGCAGAGAGCTTCTCCTGCTTTCGGGACGA
AACCACCTTCCACGGGCGGAGAGTGCGAATCTACAAGCGGGCTCAGATCT
TGGTTGCGGACCTTTGGGCTTGCTTCAACGGTGAGGGGTATGGAGAGTTT
AATGATATCGACAAAATCACCATGTTTGCAGGTAAGTATTTTGGGATCTC
TTTTCAGACTCCTTTCCCTGAACTCTGGCTTATATTCTATAGATTACCGA
ATCCCTCAGATGCTGCACCAACTCGGCTGTATGTCATACTCGCCGCCCTT
GGAAAGCCACATACGCAGGTTGCAGCCGATACCTAGTGGCTCCAACTGGG
AAATTGAACTTCGAGCGACCAGTATCTGGTGTGTCGAATTGATAAGAAGG
GAAATCGAACGCCGACATCCAGAAGCCAGGGTGAACCCGACAGTGAAGTC
CAACAAACCCACGGCGTCAGAAGAAGACGAAGACACCGAAGATCACCAGC
AGAAATGCTCAACCCAGAAGTTTGTCAAGAAGGAGCCCGTCGAAAAACCG
GCCGGAATGGGCGTGAACGCTATCTTGATAGATTTCTTCCTCTATGACAC
CATGAAAGAATTAGAGAAGGCCGGACAGGAGTCCATCCCGCATCATCGGA
CAAGGAGTATCTGGTATTAGACTTGCGGCAAAGCATATCATCTGCGTTTG
TTTTTGTCTCTATCGGTTTTTCCAACGCTATACCCCGTTGCTTTACTTGG
CCACGCGTTTTGCTCAAGGGTTGCTTTTCGGGTGGGTGATGGGAATAGAC
TTGCATACATTGTGATAATGATACCATAGCATTGCTTCTTTCTTTCTTAA
CTTAACCCTTATTTGTGAGGGCTTGTACAGGATTTTTAATCAATCAATTA
CAATCAACTAACCAGAACAACTACAATATTGTTCTACACCAAAAAAAAAA
AACCATCATCTCACATCATGGGTATCTCTTCTAGTCTAATCTATAGCGTT
CCATACCTCTTACACAGCCTGAGCCGTCCTCTCAATCTGTTCGATCCGCG
CCACCATATCCGCCTTCCACTCAAGATAACCCTCCCTCCGATCCTCACTC
AACCAATCCACCCGATCCTGCATCATAGTCCCCAACCCAGGAAGCAGCCC
ACGTCTCGAAGACTGGCCCGCAATCAATGCCCCCCTCCCAGACACCATCA
ACCTGCCCC back to topCoding sequence (CDS) from alignment at ch2:3755437..3757745- >KJC3_002850-T1 ID=KJC3_002850-T1|Name=KJC3_002850-T1|organism=Aspergillus niger KJC3|type=CDS|length=4920bp|location=Sequence derived from alignment at ch2:3755437..3757745- (Aspergillus niger KJC3)
ATTACCGAATCCCTCAGATGCTGCACCAACTCGGCTGTATGTCATACTCG
CCGCCCTTGGAAAGCCACATACGCAGGTTGCAGCCGATACCTAGTGGCTC
CAACTGGGAAATTGAACTTCGAGCGACCAGTATCTGGTGTGTCGAATTGA
TAAGAAGGGAAATCGAACGCCGACATCCAGAAGCCAGGGTGAACCCGACA
GTGAAGTCCAACAAACCCACGGCGTCAGAAGAAGACGAAGACACCGAAGA
TCACCAGCAGAAATGCTCAACCCAGAAGTTTGTCAAGAAGGAGCCCGTCG
AAAAACCGGCCGGAATGGGCGTGAACGCTATCTTGATAGATTTCTTCCTC
TATGACACCATGAAAGAATTAGAGAAGGCCGGACAGGAGTCCATCCCGCA
TCATCGGACAAGGAGTATCTGGTATTAGGAGTATGAAGGTAGTTTTGTGA
ACTGCATCTACAACTCTAACTACTCTGCGGCTTCGCTGGTCAATTTGCTA
GCAGAGAGCTTCTCCTGCTTTCGGGACGAAACCACCTTCCACGGGCGGAG
AGTGCGAATCTACAAGCGGGCTCAGATCTTGGTTGCGGACCTTTGGGCTT
GCTTCAACGGTGAGGGGTATGGAGAGTTTAATGATATCGACAAAATCACC
ATGTTTGCAGACATTCCAATCACCACTCCGGAGTTTTGGACCAAGGAAGA
TGAATGTACCGAGGAACTCATCAAGCATGTCTTTCGCTCTGCCACCGATG
AAGAGATTCCTATGCTTCAGGAACGCCTTCAATGCCTGCGAGAGGCAGGT
CGCGTTCTTTGCAGAATGTCGGACGACGAAGCAGACCCCGAGTTGATTGC
TCTTCTGCGCAAGACACTGGGATTGGGAGGCTCTTCAGATCCTCGAACCG
CAGAGACAAAAGTGCTGGAGAATGCGCAATACGCTTTCGACAATGCGATC
GACGTCGCATTGAACCCCTCCAAGACGAAAGAAGCCGCGGAGACGATATG
GAACCTGATGCAGAAGAAGGAATACTCCACACAGACATGGACGGAGCACG
AACTACACCCAAAAACGAAAGACGAGAACACGGTCGACTTCATCTTCACT
ATGGATCTCCTCAATTTCAGTTTCTGGTCCGAGCTCCCTAGCGAGAAGCG
TTTCGCGATTGAGTACCGAGGAAGGAAGTGGACGGGGTACTGGAGCTTGG
TTGCTGCCTTACAGAGAGCTTTGGATGAGGATTACCGAATCCCTCAGATG
CTGCACCAACTCGGCTGTATGTCATACTCGCCGCCCTTGGAAAGCCACAT
ACGCAGGTTGCAGCCGATACCTAGTGGCTCCAACTGGGAAATTGAACTTC
GAGCGACCAGTATCTGGTGTGTCGAATTGATAAGAAGGGAAATCGAACGC
CGACATCCAGAAGCCAGGGTGAACCCGACAGTGAAGTCCAACAAACCCAC
GGCGTCAGAAGAAGACGAAGACACCGAAGATCACCAGCAGAAATGCTCAA
CCCAGAAGTTTGTCAAGAAGGAGCCCGTCGAAAAACCGGCCGGAATGGGC
GTGAACGCTATCTTGATAGATTTCTTCCTCTATGACACCATGAAAGAATT
AGAGAAGGCCGGACAGGAGTCCATCCCGCATCATCGGACAAGGAGTATCT
GGTATTAGGAGTATGAAGGTAGTTTTGTGAACTGCATCTACAACTCTAAC
TACTCTGCGGCTTCGCTGGTCAATTTGCTAGCAGAGAGCTTCTCCTGCTT
TCGGGACGAAACCACCTTCCACGGGCGGAGAGTGCGAATCTACAAGCGGG
CTCAGATCTTGGTTGCGGACCTTTGGGCTTGCTTCAACGGTGAGGGGTAT
GGAGAGTTTAATGATATCGACAAAATCACCATGTTTGCAGACATTCCAAT
CACCACTCCGGAGTTTTGGACCAAGGAAGATGAATGTACCGAGGAACTCA
TCAAGCATGTCTTTCGCTCTGCCACCGATGAAGAGATTCCTATGCTTCAG
GAACGCCTTCAATGCCTGCGAGAGGCAGGTCGCGTTCTTTGCAGAATGTC
GGACGACGAAGCAGACCCCGAGTTGATTGCTCTTCTGCGCAAGACACTGG
GATTGGGAGGCTCTTCAGATCCTCGAACCGCAGAGACAAAAGTGCTGGAG
AATGCGCAATACGCTTTCGACAATGCGATCGACGTCGCATTGAACCCCTC
CAAGACGAAAGAAGCCGCGGAGACGATATGGAACCTGATGCAGAAGAAGG
AATACTCCACACAGACATGGACGGAGCACGAACTACACCCAAAAACGAAA
GACGAGAACACGGTCGACTTCATCTTCACTATGGATCTCCTCAATTTCAG
TTTCTGGTCCGAGCTCCCTAGCGAGAAGCGTTTCGCGATTGAGTACCGAG
GAAGGAAGTGGACGGGGTACTGGAGCTTGGTTGCTGCCTTACAGAGAGCT
TTGGATGAGGATTACCGAATCCCTCAGATGCTGCACCAACTCGGCTGTAT
GTCATACTCGCCGCCCTTGGAAAGCCACATACGCAGGTTGCAGCCGATAC
CTAGTGGCTCCAACTGGGAAATTGAACTTCGAGCGACCAGTATCTGGTGT
GTCGAATTGATAAGAAGGGAAATCGAACGCCGACATCCAGAAGCCAGGGT
GAACCCGACAGTGAAGTCCAACAAACCCACGGCGTCAGAAGAAGACGAAG
ACACCGAAGATCACCAGCAGAAATGCTCAACCCAGAAGTTTGTCAAGAAG
GAGCCCGTCGAAAAACCGGCCGGAATGGGCGTGAACGCTATCTTGATAGA
TTTCTTCCTCTATGACACCATGAAAGAATTAGAGAAGGCCGGACAGGAGT
CCATCCCGCATCATCGGACAAGGAGTATCTGGTATTAGGAGTATGAAGGT
AGTTTTGTGAACTGCATCTACAACTCTAACTACTCTGCGGCTTCGCTGGT
CAATTTGCTAGCAGAGAGCTTCTCCTGCTTTCGGGACGAAACCACCTTCC
ACGGGCGGAGAGTGCGAATCTACAAGCGGGCTCAGATCTTGGTTGCGGAC
CTTTGGGCTTGCTTCAACGGTGAGGGGTATGGAGAGTTTAATGATATCGA
CAAAATCACCATGTTTGCAGACATTCCAATCACCACTCCGGAGTTTTGGA
CCAAGGAAGATGAATGTACCGAGGAACTCATCAAGCATGTCTTTCGCTCT
GCCACCGATGAAGAGATTCCTATGCTTCAGGAACGCCTTCAATGCCTGCG
AGAGGCAGGTCGCGTTCTTTGCAGAATGTCGGACGACGAAGCAGACCCCG
AGTTGATTGCTCTTCTGCGCAAGACACTGGGATTGGGAGGCTCTTCAGAT
CCTCGAACCGCAGAGACAAAAGTGCTGGAGAATGCGCAATACGCTTTCGA
CAATGCGATCGACGTCGCATTGAACCCCTCCAAGACGAAAGAAGCCGCGG
AGACGATATGGAACCTGATGCAGAAGAAGGAATACTCCACACAGACATGG
ACGGAGCACGAACTACACCCAAAAACGAAAGACGAGAACACGGTCGACTT
CATCTTCACTATGGATCTCCTCAATTTCAGTTTCTGGTCCGAGCTCCCTA
GCGAGAAGCGTTTCGCGATTGAGTACCGAGGAAGGAAGTGGACGGGGTAC
TGGAGCTTGGTTGCTGCCTTACAGAGAGCTTTGGATGAGGATTACCGAAT
CCCTCAGATGCTGCACCAACTCGGCTGTATGTCATACTCGCCGCCCTTGG
AAAGCCACATACGCAGGTTGCAGCCGATACCTAGTGGCTCCAACTGGGAA
ATTGAACTTCGAGCGACCAGTATCTGGTGTGTCGAATTGATAAGAAGGGA
AATCGAACGCCGACATCCAGAAGCCAGGGTGAACCCGACAGTGAAGTCCA
ACAAACCCACGGCGTCAGAAGAAGACGAAGACACCGAAGATCACCAGCAG
AAATGCTCAACCCAGAAGTTTGTCAAGAAGGAGCCCGTCGAAAAACCGGC
CGGAATGGGCGTGAACGCTATCTTGATAGATTTCTTCCTCTATGACACCA
TGAAAGAATTAGAGAAGGCCGGACAGGAGTCCATCCCGCATCATCGGACA
AGGAGTATCTGGTATTAGGAGTATGAAGGTAGTTTTGTGAACTGCATCTA
CAACTCTAACTACTCTGCGGCTTCGCTGGTCAATTTGCTAGCAGAGAGCT
TCTCCTGCTTTCGGGACGAAACCACCTTCCACGGGCGGAGAGTGCGAATC
TACAAGCGGGCTCAGATCTTGGTTGCGGACCTTTGGGCTTGCTTCAACGG
TGAGGGGTATGGAGAGTTTAATGATATCGACAAAATCACCATGTTTGCAG
ACATTCCAATCACCACTCCGGAGTTTTGGACCAAGGAAGATGAATGTACC
GAGGAACTCATCAAGCATGTCTTTCGCTCTGCCACCGATGAAGAGATTCC
TATGCTTCAGGAACGCCTTCAATGCCTGCGAGAGGCAGGTCGCGTTCTTT
GCAGAATGTCGGACGACGAAGCAGACCCCGAGTTGATTGCTCTTCTGCGC
AAGACACTGGGATTGGGAGGCTCTTCAGATCCTCGAACCGCAGAGACAAA
AGTGCTGGAGAATGCGCAATACGCTTTCGACAATGCGATCGACGTCGCAT
TGAACCCCTCCAAGACGAAAGAAGCCGCGGAGACGATATGGAACCTGATG
CAGAAGAAGGAATACTCCACACAGACATGGACGGAGCACGAACTACACCC
AAAAACGAAAGACGAGAACACGGTCGACTTCATCTTCACTATGGATCTCC
TCAATTTCAGTTTCTGGTCCGAGCTCCCTAGCGAGAAGCGTTTCGCGATT
GAGTACCGAGGAAGGAAGTGGACGGGGTACTGGAGCTTGGTTGCTGCCTT
ACAGAGAGCTTTGGATGAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002850-T1.utr3p1 | KJC3_002850-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002850-T1.utr5p1 | KJC3_002850-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019438 |
| DBxref | PFAM:PF10343 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3755437..3757745 - |
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