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KJC3_002853-T1, KJC3_002853-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002853-T1
Unique NameKJC3_002853-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3763882..3764414+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002853-T1 ID=KJC3_002853-T1|Name=KJC3_002853-T1|organism=Aspergillus niger KJC3|type=mRNA|length=533bp|location=Sequence derived from alignment at ch2:3763882..3764414+ (Aspergillus niger KJC3)
TATCCCGCCACCCACTCCCTCACACCATGTCCGCTTCAAATCCCCCCTCA
CAGTCCGAATACGTGACCCTAGTATCCGGTGATGGATTCGAATTCGTCAT
CCCGCGCAGCACAGCCTGCGTGTCGGGGACGATACGTCGCATGTTAGAGC
CGTCTAGTGAGTCTTGTCTCCTCACATGTGTGTTTCAGTGGTGGCACTTG
CTAACAACTCCATTACTATATAGGTCGCTTCTCGGAATCCGTTACCGGTC
GATGCGTCCTCGAGAATATTAGCGGTATTGTGCTTGAAAAAGTATGCGAG
TATTTCTGCTACAATGAGAAGAATAAGAACCAGACATATGTTCCGGATAT
GGATATCCCGCCGGAGTTGTGTTTGGAATTGTTGATGGCGGCGGATTATT
TGGATGCGTGAGGTGATTTGATCTGATCCGTGGGACTTTCTATAGTGTAG
GTGAGTTGAATTAGGTTGCGTTGGTTGGCGTGGGGGTTAGTACTGATTGT
GGCACTAGGTTTATTGCAGTGGGCTGGCTTGGG
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Coding sequence (CDS) from alignment at ch2:3763882..3764414+

>KJC3_002853-T1 ID=KJC3_002853-T1|Name=KJC3_002853-T1|organism=Aspergillus niger KJC3|type=CDS|length=636bp|location=Sequence derived from alignment at ch2:3763882..3764414+ (Aspergillus niger KJC3)
ATGTCCGCTTCAAATCCCCCCTCACAGTCCGAATACGTGACCCTAGTATC
CGGTGATGGATTCGAATTCGTCATCCCGCGCAGCACAGCCTGCGTGTCGG
GGACGATACGTCGCATGTTAGAGCCGTCTAGTCGCTTCTCGGAATCCGTT
ACCGGTCGATGCGTCCTCGAGAATATTAGCGGTATTGTGCTTGAAAAAGT
ATGCGAGTATTTCTGCTACAATGAGAAGAATAAGAACCAGACATATGTTC
CGGATATGGATATCCCGCCGGAGTTGTGTTTGGAATTGTTGATGGCGGCG
GATTATTTGGATGCGTGAATGTCCGCTTCAAATCCCCCCTCACAGTCCGA
ATACGTGACCCTAGTATCCGGTGATGGATTCGAATTCGTCATCCCGCGCA
GCACAGCCTGCGTGTCGGGGACGATACGTCGCATGTTAGAGCCGTCTAGT
CGCTTCTCGGAATCCGTTACCGGTCGATGCGTCCTCGAGAATATTAGCGG
TATTGTGCTTGAAAAAGTATGCGAGTATTTCTGCTACAATGAGAAGAATA
AGAACCAGACATATGTTCCGGATATGGATATCCCGCCGGAGTTGTGTTTG
GAATTGTTGATGGCGGCGGATTATTTGGATGCGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002853KJC3_002853Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002853-T1KJC3_002853-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002853-T1.utr5p1KJC3_002853-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002853-T1.exon1KJC3_002853-T1.exon1Aspergillus niger KJC3exon
KJC3_002853-T1.exon2KJC3_002853-T1.exon2Aspergillus niger KJC3exon
KJC3_002853-T1.exon3KJC3_002853-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002853-T1.cdsKJC3_002853-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002853-T1.utr3p1KJC3_002853-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_002853-T1.utr3p2KJC3_002853-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265QTV
DBxrefInterPro:IPR011333
DBxrefInterPro:IPR016073
DBxrefInterPro:IPR001232
DBxrefPFAM:PF03931
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3763882..3764414 +
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