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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3764835..3766378- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002854-T1 ID=KJC3_002854-T1|Name=KJC3_002854-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1544bp|location=Sequence derived from alignment at ch2:3764835..3766378- (Aspergillus niger KJC3)
GCTTTCCCCTCACGCGCTTTGCATCCCCAACCAGTACTACATGCTCTTTT
AATTGGGTCATTGTCGGCTGGAATCAAAATGGCTGACATAGATGAGGCCG
TCATTCATATGCCTTCGCAGGATGCGAGCGCTCACATTGACACCGACCTC
TCCGACGAGACTCAGGACTTCCGCATGCTGAATAGCATTTCCTTGTCAGT
GCTACCACGCGTTTCTTCTGGTCCCTACCTCATTTACAGCTAAATGCGCA
TATGACATGCTAACAATGGAGAAAACAGCCTTACAGATGGATCTCAACAA
AGTCTCCCCAAACGCGGTGAAAAGGACTTCGAACCGAACCCGACGCTCTT
TCAAGCCGACATTCTCTCCGCCTCGCGGCAGGCCATGCACAATGCTCTCT
CGTACCCTCGTCTACACCACCCAAAGACACAAGTGATTGGAATATACTCT
CCCAATGGTCCGGTCCCGCCGCGATCTGCCCAAAAGCTAGATACGATTAC
TGAAGAGTCGGAGCCCTCGAAACCCGCAGGCACGGAAATGGGCGTCCATC
CCGACTCATGTGTCTATGTGCCCACCCCCAAGGGACAGTACTTCAAATCG
ATAGGTCAGGCAGATCGTTGGAACCGCATATGGCTACTTCCAGAGGAGGC
TCTATATCTGCTTGAGAGAGGGACTCTAGATATCAGGTGGCCCTGCTCGG
AGGTCGGGTGTGCTGACGAGGAGGGAGCGGACGACTCTGGAATCCCCATG
AGCTTACAGGCTGCTTATGCGGCTTTTATGGGGCGGAGCGGTCTGACTAG
TGAGCGGTACTCGGTTTATGCGGGATTGAGGCGGTTGGGGTACACGATCA
TTCGTGCCCCGGGATGGCACGATGGAGAGGAGGGTGCAGAGACCAGCGAA
TCACAGCAAACCGTACTGGAGAAGCCTCAGGGTCTAGGTCTTGGGATTGC
TGGGGTGTTTAGACAGCTTTTGCAGTGGCTGTACAAACCTGGTAGCGCTA
CAACTGCGTTGGGGCCTGTTGTGGGGCTTGGGATTCATCGCAGTTATGGT
ACGTTTCCTGCTTGCCACTGCGCTTGCGATTTGCTGACAATGTTTCAGAT
GACATATATCAGAAGCTCTCTATCATCCCCTGGTATGACCCGACTGCCTC
ACCATCTCCTCCGCCTCCCACGACCCCGCCCTACCGTGTAGTCTTCCATA
TCTACAAACCATCCACACCATTCAAGAAATCCGCCCCTCCGACCCCCGAC
TTTAGGCTCGCCGTTGTGAATGCACGCACGCACACCACAATTCCGACATC
AGCTCAGCTTGGCGCATTGCTCGAGAGCACCCCGCTTGACCCACCGGTGG
GCGAGAAGATGAGTCGCCAGCTGTACCAGCGACTCCGGTACGGATACAGA
AATGTGATCCTGGCTGTAGTAGACGAGGGAGTTGTGAGCTACCTCCGCAT
CGCGGACTCGGCATTCGGCAAGGAGAAGCTCTACAAGGAGAAGAACGCTA
AAGGAAACAAGGGACCCTGGCGTCCACGGCCAAAAGGGCGCTGA back to topCoding sequence (CDS) from alignment at ch2:3764835..3766378- >KJC3_002854-T1 ID=KJC3_002854-T1|Name=KJC3_002854-T1|organism=Aspergillus niger KJC3|type=CDS|length=3996bp|location=Sequence derived from alignment at ch2:3764835..3766378- (Aspergillus niger KJC3)
ATGACATATATCAGAAGCTCTCTATCATCCCCTGGTATGACCCGACTGCC
TCACCATCTCCTCCGCCTCCCACGACCCCGCCCTACCGTGTAGTCTTCCA
TATCTACAAACCATCCACACCATTCAAGAAATCCGCCCCTCCGACCCCCG
ACTTTAGGCTCGCCGTTGTGAATGCACGCACGCACACCACAATTCCGACA
TCAGCTCAGCTTGGCGCATTGCTCGAGAGCACCCCGCTTGACCCACCGGT
GGGCGAGAAGATGAGTCGCCAGCTGTACCAGCGACTCCGGTACGGATACA
GAAATGTGATCCTGGCTGTAGTAGACGAGGGAGTTGTGAGCTACCTCCGC
ATCGCGGACTCGGCATTCGGCAAGGAGAAGCTCTACAAGGAGAAGAACGC
TAAAGGAAACAAGGGACCCTGGCGTCCACGGCCAAAAGGGCGCTGACCTT
ACAGATGGATCTCAACAAAGTCTCCCCAAACGCGGTGAAAAGGACTTCGA
ACCGAACCCGACGCTCTTTCAAGCCGACATTCTCTCCGCCTCGCGGCAGG
CCATGCACAATGCTCTCTCGTACCCTCGTCTACACCACCCAAAGACACAA
GTGATTGGAATATACTCTCCCAATGGTCCGGTCCCGCCGCGATCTGCCCA
AAAGCTAGATACGATTACTGAAGAGTCGGAGCCCTCGAAACCCGCAGGCA
CGGAAATGGGCGTCCATCCCGACTCATGTGTCTATGTGCCCACCCCCAAG
GGACAGTACTTCAAATCGATAGGTCAGGCAGATCGTTGGAACCGCATATG
GCTACTTCCAGAGGAGGCTCTATATCTGCTTGAGAGAGGGACTCTAGATA
TCAGGTGGCCCTGCTCGGAGGTCGGGTGTGCTGACGAGGAGGGAGCGGAC
GACTCTGGAATCCCCATGAGCTTACAGGCTGCTTATGCGGCTTTTATGGG
GCGGAGCGGTCTGACTAGTGAGCGGTACTCGGTTTATGCGGGATTGAGGC
GGTTGGGGTACACGATCATTCGTGCCCCGGGATGGCACGATGGAGAGGAG
GGTGCAGAGACCAGCGAATCACAGCAAACCGTACTGGAGAAGCCTCAGGG
TCTAGGTCTTGGGATTGCTGGGGTGTTTAGACAGCTTTTGCAGTGGCTGT
ACAAACCTGGTAGCGCTACAACTGCGTTGGGGCCTGTTGTGGGGCTTGGG
ATTCATCGCAGTTATGATGGCTGACATAGATGAGGCCGTCATTCATATGC
CTTCGCAGGATGCGAGCGCTCACATTGACACCGACCTCTCCGACGAGACT
CAGGACTTCCGCATGCTGAATAGCATTTCCTTATGACATATATCAGAAGC
TCTCTATCATCCCCTGGTATGACCCGACTGCCTCACCATCTCCTCCGCCT
CCCACGACCCCGCCCTACCGTGTAGTCTTCCATATCTACAAACCATCCAC
ACCATTCAAGAAATCCGCCCCTCCGACCCCCGACTTTAGGCTCGCCGTTG
TGAATGCACGCACGCACACCACAATTCCGACATCAGCTCAGCTTGGCGCA
TTGCTCGAGAGCACCCCGCTTGACCCACCGGTGGGCGAGAAGATGAGTCG
CCAGCTGTACCAGCGACTCCGGTACGGATACAGAAATGTGATCCTGGCTG
TAGTAGACGAGGGAGTTGTGAGCTACCTCCGCATCGCGGACTCGGCATTC
GGCAAGGAGAAGCTCTACAAGGAGAAGAACGCTAAAGGAAACAAGGGACC
CTGGCGTCCACGGCCAAAAGGGCGCTGACCTTACAGATGGATCTCAACAA
AGTCTCCCCAAACGCGGTGAAAAGGACTTCGAACCGAACCCGACGCTCTT
TCAAGCCGACATTCTCTCCGCCTCGCGGCAGGCCATGCACAATGCTCTCT
CGTACCCTCGTCTACACCACCCAAAGACACAAGTGATTGGAATATACTCT
CCCAATGGTCCGGTCCCGCCGCGATCTGCCCAAAAGCTAGATACGATTAC
TGAAGAGTCGGAGCCCTCGAAACCCGCAGGCACGGAAATGGGCGTCCATC
CCGACTCATGTGTCTATGTGCCCACCCCCAAGGGACAGTACTTCAAATCG
ATAGGTCAGGCAGATCGTTGGAACCGCATATGGCTACTTCCAGAGGAGGC
TCTATATCTGCTTGAGAGAGGGACTCTAGATATCAGGTGGCCCTGCTCGG
AGGTCGGGTGTGCTGACGAGGAGGGAGCGGACGACTCTGGAATCCCCATG
AGCTTACAGGCTGCTTATGCGGCTTTTATGGGGCGGAGCGGTCTGACTAG
TGAGCGGTACTCGGTTTATGCGGGATTGAGGCGGTTGGGGTACACGATCA
TTCGTGCCCCGGGATGGCACGATGGAGAGGAGGGTGCAGAGACCAGCGAA
TCACAGCAAACCGTACTGGAGAAGCCTCAGGGTCTAGGTCTTGGGATTGC
TGGGGTGTTTAGACAGCTTTTGCAGTGGCTGTACAAACCTGGTAGCGCTA
CAACTGCGTTGGGGCCTGTTGTGGGGCTTGGGATTCATCGCAGTTATGAT
GGCTGACATAGATGAGGCCGTCATTCATATGCCTTCGCAGGATGCGAGCG
CTCACATTGACACCGACCTCTCCGACGAGACTCAGGACTTCCGCATGCTG
AATAGCATTTCCTTATGACATATATCAGAAGCTCTCTATCATCCCCTGGT
ATGACCCGACTGCCTCACCATCTCCTCCGCCTCCCACGACCCCGCCCTAC
CGTGTAGTCTTCCATATCTACAAACCATCCACACCATTCAAGAAATCCGC
CCCTCCGACCCCCGACTTTAGGCTCGCCGTTGTGAATGCACGCACGCACA
CCACAATTCCGACATCAGCTCAGCTTGGCGCATTGCTCGAGAGCACCCCG
CTTGACCCACCGGTGGGCGAGAAGATGAGTCGCCAGCTGTACCAGCGACT
CCGGTACGGATACAGAAATGTGATCCTGGCTGTAGTAGACGAGGGAGTTG
TGAGCTACCTCCGCATCGCGGACTCGGCATTCGGCAAGGAGAAGCTCTAC
AAGGAGAAGAACGCTAAAGGAAACAAGGGACCCTGGCGTCCACGGCCAAA
AGGGCGCTGACCTTACAGATGGATCTCAACAAAGTCTCCCCAAACGCGGT
GAAAAGGACTTCGAACCGAACCCGACGCTCTTTCAAGCCGACATTCTCTC
CGCCTCGCGGCAGGCCATGCACAATGCTCTCTCGTACCCTCGTCTACACC
ACCCAAAGACACAAGTGATTGGAATATACTCTCCCAATGGTCCGGTCCCG
CCGCGATCTGCCCAAAAGCTAGATACGATTACTGAAGAGTCGGAGCCCTC
GAAACCCGCAGGCACGGAAATGGGCGTCCATCCCGACTCATGTGTCTATG
TGCCCACCCCCAAGGGACAGTACTTCAAATCGATAGGTCAGGCAGATCGT
TGGAACCGCATATGGCTACTTCCAGAGGAGGCTCTATATCTGCTTGAGAG
AGGGACTCTAGATATCAGGTGGCCCTGCTCGGAGGTCGGGTGTGCTGACG
AGGAGGGAGCGGACGACTCTGGAATCCCCATGAGCTTACAGGCTGCTTAT
GCGGCTTTTATGGGGCGGAGCGGTCTGACTAGTGAGCGGTACTCGGTTTA
TGCGGGATTGAGGCGGTTGGGGTACACGATCATTCGTGCCCCGGGATGGC
ACGATGGAGAGGAGGGTGCAGAGACCAGCGAATCACAGCAAACCGTACTG
GAGAAGCCTCAGGGTCTAGGTCTTGGGATTGCTGGGGTGTTTAGACAGCT
TTTGCAGTGGCTGTACAAACCTGGTAGCGCTACAACTGCGTTGGGGCCTG
TTGTGGGGCTTGGGATTCATCGCAGTTATGATGGCTGACATAGATGAGGC
CGTCATTCATATGCCTTCGCAGGATGCGAGCGCTCACATTGACACCGACC
TCTCCGACGAGACTCAGGACTTCCGCATGCTGAATAGCATTTCCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002854-T1.utr5p1 | KJC3_002854-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263AZP |
| DBxref | InterPro:IPR024336 |
| DBxref | PFAM:PF12928 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3764835..3766378 - |
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