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KJC3_002857-T1, KJC3_002857-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002857-T1
Unique NameKJC3_002857-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3771424..3772137+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002857-T1 ID=KJC3_002857-T1|Name=KJC3_002857-T1|organism=Aspergillus niger KJC3|type=mRNA|length=714bp|location=Sequence derived from alignment at ch2:3771424..3772137+ (Aspergillus niger KJC3)
ATGCCTCCCTCTCGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTCAAA
CCAGGCGACCTTATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCATCAG
CAGCGCCATCTACACGCTCTCAGAAAGCCAAAGATCTCGACCTGATTGAT
ACTACTCGATCGAGTACACCATCCGTTGAAGATGTGTCCGAAGCAGAACA
GGCCTCTGTTACTCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGCTTG
CCGTAAGGAAGCAGGCTCAGACAGAGATTCAACAACCACGATCAGAAGAG
GATGCTAAGGCGGAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTGGAA
GAAGGAAGAAGCAAAGAGACAAGGGCCCAGAGGTGAGTGACACGCCCCAG
TCAGGCATCTCCTGTGACAAGTACGCTGATCATCTCCACTAGTTCACCAG
GAGGGCCTCGAGCTACGAGAGAAGATTCTGCGCAACTTCGACCTCTCAAG
CCAGTACGGGGTAGGTCTGACTCTATTCATATACCTCATGTTCTTTTGAG
CTGACCTTATATTGGTGTAGCCTTGCATTGGAATTGCTCGACTGAAGCGG
TGGAGACGTGCGCATATGCTGGGCCTCAATCCTCCCATTGAGGTGTTGGC
CGTGTTGTTGAAACCGGACGATACCACTAAACAGAGAGCGTATATTGACG
AGTTGATGTCTTGA
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Coding sequence (CDS) from alignment at ch2:3771424..3772137+

>KJC3_002857-T1 ID=KJC3_002857-T1|Name=KJC3_002857-T1|organism=Aspergillus niger KJC3|type=CDS|length=1782bp|location=Sequence derived from alignment at ch2:3771424..3772137+ (Aspergillus niger KJC3)
ATGCCTCCCTCTCGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTCAAA
CCAGGCGACCTTATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCATCAG
CAGCGCCATCTACACGCTCTCAGAAAGCCAAAGATCTCGACCTGATTGAT
ACTACTCGATCGAGTACACCATCCGTTGAAGATGTGTCCGAAGCAGAACA
GGCCTCTGTTACTCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGCTTG
CCGTAAGGAAGCAGGCTCAGACAGAGATTCAACAACCACGATCAGAAGAG
GATGCTAAGGCGGAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTGGAA
GAAGGAAGAAGCAAAGAGACAAGGGCCCAGAGTTCACCAGGAGGGCCTCG
AGCTACGAGAGAAGATTCTGCGCAACTTCGACCTCTCAAGCCAGTACGGG
CCTTGCATTGGAATTGCTCGACTGAAGCGGTGGAGACGTGCGCATATGCT
GGGCCTCAATCCTCCCATTGAGGTGTTGGCCGTGTTGTTGAAACCGGACG
ATACCACTAAACAGAGAGCGTATATTGACGAGTTGATGTCTTGAATGCCT
CCCTCTCGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTCAAACCAGGC
GACCTTATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCATCAGCAGCGC
CATCTACACGCTCTCAGAAAGCCAAAGATCTCGACCTGATTGATACTACT
CGATCGAGTACACCATCCGTTGAAGATGTGTCCGAAGCAGAACAGGCCTC
TGTTACTCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGCTTGCCGTAA
GGAAGCAGGCTCAGACAGAGATTCAACAACCACGATCAGAAGAGGATGCT
AAGGCGGAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTGGAAGAAGGA
AGAAGCAAAGAGACAAGGGCCCAGAGTTCACCAGGAGGGCCTCGAGCTAC
GAGAGAAGATTCTGCGCAACTTCGACCTCTCAAGCCAGTACGGGCCTTGC
ATTGGAATTGCTCGACTGAAGCGGTGGAGACGTGCGCATATGCTGGGCCT
CAATCCTCCCATTGAGGTGTTGGCCGTGTTGTTGAAACCGGACGATACCA
CTAAACAGAGAGCGTATATTGACGAGTTGATGTCTTGAATGCCTCCCTCT
CGTCGCCGCGGTGGCAATACTGCCGCCACCCGTTCAAACCAGGCGACCTT
ATCGTTCGGCTCCAAGTCCAGAGTCACGAAGCCATCAGCAGCGCCATCTA
CACGCTCTCAGAAAGCCAAAGATCTCGACCTGATTGATACTACTCGATCG
AGTACACCATCCGTTGAAGATGTGTCCGAAGCAGAACAGGCCTCTGTTAC
TCCCACGGAGCCTTCGCAACCCCATGTGGCAGAGCTTGCCGTAAGGAAGC
AGGCTCAGACAGAGATTCAACAACCACGATCAGAAGAGGATGCTAAGGCG
GAAAAGATTACCGAAAGGCAGCTGCAGCAGTACTGGAAGAAGGAAGAAGC
AAAGAGACAAGGGCCCAGAGTTCACCAGGAGGGCCTCGAGCTACGAGAGA
AGATTCTGCGCAACTTCGACCTCTCAAGCCAGTACGGGCCTTGCATTGGA
ATTGCTCGACTGAAGCGGTGGAGACGTGCGCATATGCTGGGCCTCAATCC
TCCCATTGAGGTGTTGGCCGTGTTGTTGAAACCGGACGATACCACTAAAC
AGAGAGCGTATATTGACGAGTTGATGTCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002857KJC3_002857Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002857-T1.exon1KJC3_002857-T1.exon1Aspergillus niger KJC3exon
KJC3_002857-T1.exon2KJC3_002857-T1.exon2Aspergillus niger KJC3exon
KJC3_002857-T1.exon3KJC3_002857-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002857-T1.cdsKJC3_002857-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002857-T1KJC3_002857-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007218
DBxrefPFAM:PF04081
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3771424..3772137 +
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