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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3776641..3780102- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002860-T1 ID=KJC3_002860-T1|Name=KJC3_002860-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3462bp|location=Sequence derived from alignment at ch2:3776641..3780102- (Aspergillus niger KJC3)
TGACGGTCCAAGATAGACCGACTTTAAATCGAACTACTGTGTATCTTACT
GCCTCTCCATCCCCAATACACCTCGTTGCATGAGGGACTCGCTGTCCAAC
TCACTCCGGGGAAATGATTTCGGATATGCCACCAGCTCCTCTTGGCATGC
TCGCTCTCTCCCAGTGATACCGGATCACCCCGTTTACGATCGCCCCCTCT
CCGTCTCCTCGCATTTGCGCGACACCCTTGTACCCACCATCCCACGGATG
CTTACTTTTGAGAGATTCGCTTTCCGGCTCAACCCAGATCGCTCAGGCAT
CGCTCCTGTTCCCTGAGCATCAGCCATGTCCATACTGCCCTCGGCCGCTT
CCGCCGCAACTGCTTCATTAACTGCTGCGCAGTCCCTGAACACCACTTCA
TCGATCGCCGCCCATTCCTCATTGTCCTCGTCGTCGCGCGAACTACTGTC
GCTTCCATTTCGTGGGCTCTACCAGGCAGAGGCTTTTACATTCTCTACCG
TGCCTAAGCAGATCGCTAAGCTAGTTGGGCTGCAAGATATGGCGACACGA
TTTTGGGGGGCAGCTCCTGGGACGGGGCTGGAGCCTGAAGCAGTACTGGC
AACGCAGACAGCGGCTGAGGCTGTCAGAGACGGCGTTGTTGATGCTGCTG
CTCAGGCTGACTCCAGTCTCCATTTCTCCGACATCCTCCAGGCAGTCATG
AAATTTAGTGGTTTCTTCTCGTATCTGACAAGCCGTTGGTCGTTAACCTG
CTTTACCGTGGTAAATACCCACTGGCCCCGGCTAGTCGTTGTTGTGAAAA
TGGTCAGGCTAACCTATCAAGGCTCTCATATTGAACAGGATTACCATATA
TGCTTCCACTAGAAGACACCTTAATCTGGATTGGACTAGGCGATTGGCTC
TGCGGATTGTTCCCATTGTCCTCTTTATAACTCAAATCTACGCCCTTCTT
CGGTCTATCCGTTGTCAAACATCCCCGGAATACTCTACGATACGCTATGG
TACGCCAGGGAAGCGCTTGCTATTCGACCATTCTGGAGGCGGTGGCTTTT
TGCATTCCCTAAGCTCCACCCTTTTGCCTTGGGAAACAGACGAGCAGTCT
TGCAGTGCGGTGCATATGGGTCGTCCTGTAAATGCCTCGGACATATCATA
TGGCTCTTTCCGACTACTCTGGCCGGTTTTCATACGCCTCTGCCTCAGTC
ACTTTGTCGAGACCGTGTCTTGCGCTTTGCAGGGACGAGCAGTCGTCACA
GAAGCTGGCATGTCTATTTTCGAACACTCGCTTGCATTTGCAGAGGCGGA
ATCTGTGATCAGCCAAACCCTTGGTCTTGGTATATTTGGGTTGTCCAAGC
AAAGCAGTTCTAAAGATATCGCTGGGGAGGGCGGGCAATCTACCCTGCAT
ATCCTGACTCGAGCTCAAGCTCTAGAGCGAATGAATGTCACCCCCGAGTT
ATTGCTGATCGCGATGATATCGTGTTGCAACAGTCTGACCTCAAACGTTC
TAGATGTCATTGGCAGACAAAGTCGTTACCGCTTGGTGAATACCGCTTTC
TGGGGCCTTTGCTTCATGTCGGCTATGGCATGGGGCTTGTTCGGTAGTTC
GGCAGTTGGAAGCGACAATGTCGTTCTGAAATTTCCGACTGTCTGCATTG
TAGGGTTCGTTCCGCACCTTCTAATCCTGCTAGGAATTATCGCCTGCGTC
TTTATATACGCGTTTGCCCTGATTATCACAGCATTTTCGCTACCTACGCA
GACTTCGGGTCCTTTGTCACTTCGAGAAAGATTCTCTCTAGCACATGAGA
ATATGCAGGGCGCCAGCCAGATTCAGAATATTCGTCTTAACTGGCACGAG
GATTTCTACAGCACGCTGCTGAGGATCGGTTACACGGCTTTAACGGCTGC
TAGCGAGGCCGTCTTTCTGAATGAAGGAAGACGGGTTTCCGCGCGCAGGA
TGACTTGGCTAGAACAGGACAGGCTGGCCGAAATAGAGTCTCATCGCAAG
CAGTCATCTTGGAACCTTCGCAGTGACCCTTCCGGGGATATGTGCTCTGA
GAATGGGGAGTTAGACTTCGATATTCCCGAGTCAACCGTGGAATGGGAGA
GCGGATACTCGCGCGAAAAGAAGATCGAGAAGCCCAAGCCAGGCTCCAGG
CCTGTTCGTCCGCAGAATGATGCAGGCGGTGTGGGTACCTTCAGGGGCGT
GGTTCGATGTTACCATGGGTTCGCCTTCTTCCGCGGCATCTTCTATCTCG
TCCTGAAGTGGATTTCTTACGGTTTGGACAAGCTTCTTTCCCGGATGGGC
ATAACTGCCCGCCCACAGTGGTTGAAATCCGCGGTAGGGTCACCAAAGGA
CTCGCAGAAGAAGAGAAAGGGCAACCGCATGGATACTCTAGACTTTTGGA
TTTTGACAGATGATGGAGTTTTAGAGATGCCTGACGATCATGAATTCGAT
GTAGAAAGAGAGATGCGGAAAAGAGAAAGGAATCAGGCCGCTGGCTGGGA
GGAATCCGATGAACGCCGGCTTGATGAGAAACTCTACGGTTGGTGGAAAG
TGGGAGGCTCCTGGGGCAATCAGGACCAGACCTCTGACTATACACCGTCT
GTTGGTGATTGGGAAGACACCACGAGCGTCATATCGATGTCGACAACGGC
CGACTCCGAGTGGGAAGGGTACGAATCCGACGGCCGTCGCACTCCCACTC
AAGAAGACCCCTTTCCAGGTCGTTTCTCCCGAGAAAGTACTCCGGCTCAT
GAACCGCTCGTGGATATCGGCGCCTTGGCACGACTGCTGGATCCTCGCGA
TCAAGAAAGCAGGCACGAAGCGCGCATATTGTCTGCTCACCTGGCTGCCG
GCCGTGAGGGTCGGATAATGACCCGTCGGCAGTTCCAGAAGCACGTTGAA
CGCGACCGAGCCCAAATTTTGCTAAGCTCACGATTGGCACGGCCTTCCAC
ATATGAATCTACTAACGGCAAGCGCAAGCCTACCTCCGAGGAAGAAGCTG
AGCTTCTCGAAAACCTCATCCTTTCGCGAAGAGCCGAGATGTCATCCGCT
CGAAGCACAGACGAGCAGACGTGGGAATCGGGCGCCTCGGGTCTTGGTCC
TAGCGGGCCGCCATGCGTCATTTGCCAGACCAACCCACGGTCCATCATCA
CCTGGCCATGTCGGTGTCTCTGTATTTGCGAAGATTGCCGTGTCAGTCTT
GCGATGAATAACTTTGGAAATTGTGTGACATGCCGCCAGGACGTTGCAGG
CTATGTCCGGCTATGGGTCCCATAAGTCTCATTTACATCTTCTCTTGTTT
CTCTTTTCAGCATCTTCCTCATGCTTGACATAACGAGGTCTTCATTTAGC
AACATTAGCGTAATCTGAATGCAAAGCGATAGATAGAGTGGAACATGTAC
ATTTTAGCATCTAGGATAAATAATATATTGCAGCGCGGATATAGTAGCAA
TCTCCATCAACA back to topCoding sequence (CDS) from alignment at ch2:3776641..3780102- >KJC3_002860-T1 ID=KJC3_002860-T1|Name=KJC3_002860-T1|organism=Aspergillus niger KJC3|type=CDS|length=5778bp|location=Sequence derived from alignment at ch2:3776641..3780102- (Aspergillus niger KJC3)
GCTCTCATATTGAACAGGATTACCATATATGCTTCCACTAGAAGACACCT
TAATCTGGATTGGACTAGGCGATTGGCTCTGCGGATTGTTCCCATTGTCC
TCTTTATAACTCAAATCTACGCCCTTCTTCGGTCTATCCGTTGTCAAACA
TCCCCGGAATACTCTACGATACGCTATGGTACGCCAGGGAAGCGCTTGCT
ATTCGACCATTCTGGAGGCGGTGGCTTTTTGCATTCCCTAAGCTCCACCC
TTTTGCCTTGGGAAACAGACGAGCAGTCTTGCAGTGCGGTGCATATGGGT
CGTCCTGTAAATGCCTCGGACATATCATATGGCTCTTTCCGACTACTCTG
GCCGGTTTTCATACGCCTCTGCCTCAGTCACTTTGTCGAGACCGTGTCTT
GCGCTTTGCAGGGACGAGCAGTCGTCACAGAAGCTGGCATGTCTATTTTC
GAACACTCGCTTGCATTTGCAGAGGCGGAATCTGTGATCAGCCAAACCCT
TGGTCTTGGTATATTTGGGTTGTCCAAGCAAAGCAGTTCTAAAGATATCG
CTGGGGAGGGCGGGCAATCTACCCTGCATATCCTGACTCGAGCTCAAGCT
CTAGAGCGAATGAATGTCACCCCCGAGTTATTGCTGATCGCGATGATATC
GTGTTGCAACAGTCTGACCTCAAACGTTCTAGATGTCATTGGCAGACAAA
GTCGTTACCGCTTGGTGAATACCGCTTTCTGGGGCCTTTGCTTCATGTCG
GCTATGGCATGGGGCTTGTTCGGTAGTTCGGCAGTTGGAAGCGACAATGT
CGTTCTGAAATTTCCGACTGTCTGCATTGTAGGGTTCGTTCCGCACCTTC
TAATCCTGCTAGGAATTATCGCCTGCGTCTTTATATACGCGTTTGCCCTG
ATTATCACAGCATTTTCGCTACCTACGCAGACTTCGGGTCCTTTGTCACT
TCGAGAAAGATTCTCTCTAGCACATGAGAATATGCAGGGCGCCAGCCAGA
TTCAGAATATTCGTCTTAACTGGCACGAGGATTTCTACAGCACGCTGCTG
AGGATCGGTTACACGGCTTTAACGGCTGCTAGCGAGGCCGTCTTTCTGAA
TGAAGGAAGACGGGTTTCCGCGCGCAGGATGACTTGGCTAGAACAGGACA
GGCTGGCCGAAATAGAGTCTCATCGCAAGCAGTCATCTTGGAACCTTCGC
AGTGACCCTTCCGGGGATATGTGCTCTGAGAATGGGGAGTTAGACTTCGA
TATTCCCGAGTCAACCGTGGAATGGGAGAGCGGATACTCGCGCGAAAAGA
AGATCGAGAAGCCCAAGCCAGGCTCCAGGCCTGTTCGTCCGCAGAATGAT
GCAGGCGGTGTGGGTACCTTCAGGGGCGTGGTTCGATGTTACCATGGGTT
CGCCTTCTTCCGCGGCATCTTCTATCTCGTCCTGAAGTGGATTTCTTACG
GTTTGGACAAGCTTCTTTCCCGGATGGGCATAACTGCCCGCCCACAGTGG
TTGAAATCCGCGGTAGGGTCACCAAAGGACTCGCAGAAGAAGAGAAAGGG
CAACCGCATGGATACTCTAGACTTTTGGATTTTGACAGATGATGGAGTTT
TAGAGATGCCTGACGATCATGAATTCGATGTAGAAAGAGAGATGCGGAAA
AGAGAAAGGAATCAGGCCGCTGGCTGGGAGGAATCCGATGAACGCCGGCT
TGATGAGAAACTCTACGGTTGGTGGAAAGTGGGAGGCTCCTGGGGCAATC
AGGACCAGACCTCTGACTATACACCGTCTGTTGGTGATTGGGAAGACACC
ACGAGCGTCATATCGATGTCGACAACGGCCGACTCCGAGTGGGAAGGGTA
CGAATCCGACGGCCGTCGCACTCCCACTCAAGAAGACCCCTTTCCAGGTC
GTTTCTCCCGAGAAAGTACTCCGGCTCATGAACCGCTCGTGGATATCGGC
GCCTTGGCACGACTGCTGGATCCTCGCGATCAAGAAAGCAGGCACGAAGC
GCGCATATTGTCTGCTCACCTGGCTGCCGGCCGTGAGGGTCGGATAATGA
CCCGTCGGCAGTTCCAGAAGCACGTTGAACGCGACCGAGCCCAAATTTTG
CTAAGCTCACGATTGGCACGGCCTTCCACATATGAATCTACTAACGGCAA
GCGCAAGCCTACCTCCGAGGAAGAAGCTGAGCTTCTCGAAAACCTCATCC
TTTCGCGAAGAGCCGAGATGTCATCCGCTCGAAGCACAGACGAGCAGACG
TGGGAATCGGGCGCCTCGGGTCTTGGTCCTAGCGGGCCGCCATGCGTCAT
TTGCCAGACCAACCCACGGTCCATCATCACCTGGCCATGTCGGTGTCTCT
GTATTTGCGAAGATTGCCGTGTCAGTCTTGCGATGAATAACTTTGGAAAT
TGTGTGACATGCCGCCAGGACGTTGCAGGCTATGTCCGGCTATGGGTCCC
ATAAATGTCCATACTGCCCTCGGCCGCTTCCGCCGCAACTGCTTCATTAA
CTGCTGCGCAGTCCCTGAACACCACTTCATCGATCGCCGCCCATTCCTCA
TTGTCCTCGTCGTCGCGCGAACTACTGTCGCTTCCATTTCGTGGGCTCTA
CCAGGCAGAGGCTTTTACATTCTCTACCGTGCCTAAGCAGATCGCTAAGC
TAGTTGGGCTGCAAGATATGGCGACACGATTTTGGGGGGCAGCTCCTGGG
ACGGGGCTGGAGCCTGAAGCAGTACTGGCAACGCAGACAGCGGCTGAGGC
TGTCAGAGACGGCGTTGTTGATGCTGCTGCTCAGGCTGACTCCAGTCTCC
ATTTCTCCGACATCCTCCAGGCAGTCATGAAATTTAGTGGTTTCTTCTCG
TATCTGACAAGCCGTTGGTCGTTAACCTGCTTTACCGTGGCTCTCATATT
GAACAGGATTACCATATATGCTTCCACTAGAAGACACCTTAATCTGGATT
GGACTAGGCGATTGGCTCTGCGGATTGTTCCCATTGTCCTCTTTATAACT
CAAATCTACGCCCTTCTTCGGTCTATCCGTTGTCAAACATCCCCGGAATA
CTCTACGATACGCTATGGTACGCCAGGGAAGCGCTTGCTATTCGACCATT
CTGGAGGCGGTGGCTTTTTGCATTCCCTAAGCTCCACCCTTTTGCCTTGG
GAAACAGACGAGCAGTCTTGCAGTGCGGTGCATATGGGTCGTCCTGTAAA
TGCCTCGGACATATCATATGGCTCTTTCCGACTACTCTGGCCGGTTTTCA
TACGCCTCTGCCTCAGTCACTTTGTCGAGACCGTGTCTTGCGCTTTGCAG
GGACGAGCAGTCGTCACAGAAGCTGGCATGTCTATTTTCGAACACTCGCT
TGCATTTGCAGAGGCGGAATCTGTGATCAGCCAAACCCTTGGTCTTGGTA
TATTTGGGTTGTCCAAGCAAAGCAGTTCTAAAGATATCGCTGGGGAGGGC
GGGCAATCTACCCTGCATATCCTGACTCGAGCTCAAGCTCTAGAGCGAAT
GAATGTCACCCCCGAGTTATTGCTGATCGCGATGATATCGTGTTGCAACA
GTCTGACCTCAAACGTTCTAGATGTCATTGGCAGACAAAGTCGTTACCGC
TTGGTGAATACCGCTTTCTGGGGCCTTTGCTTCATGTCGGCTATGGCATG
GGGCTTGTTCGGTAGTTCGGCAGTTGGAAGCGACAATGTCGTTCTGAAAT
TTCCGACTGTCTGCATTGTAGGGTTCGTTCCGCACCTTCTAATCCTGCTA
GGAATTATCGCCTGCGTCTTTATATACGCGTTTGCCCTGATTATCACAGC
ATTTTCGCTACCTACGCAGACTTCGGGTCCTTTGTCACTTCGAGAAAGAT
TCTCTCTAGCACATGAGAATATGCAGGGCGCCAGCCAGATTCAGAATATT
CGTCTTAACTGGCACGAGGATTTCTACAGCACGCTGCTGAGGATCGGTTA
CACGGCTTTAACGGCTGCTAGCGAGGCCGTCTTTCTGAATGAAGGAAGAC
GGGTTTCCGCGCGCAGGATGACTTGGCTAGAACAGGACAGGCTGGCCGAA
ATAGAGTCTCATCGCAAGCAGTCATCTTGGAACCTTCGCAGTGACCCTTC
CGGGGATATGTGCTCTGAGAATGGGGAGTTAGACTTCGATATTCCCGAGT
CAACCGTGGAATGGGAGAGCGGATACTCGCGCGAAAAGAAGATCGAGAAG
CCCAAGCCAGGCTCCAGGCCTGTTCGTCCGCAGAATGATGCAGGCGGTGT
GGGTACCTTCAGGGGCGTGGTTCGATGTTACCATGGGTTCGCCTTCTTCC
GCGGCATCTTCTATCTCGTCCTGAAGTGGATTTCTTACGGTTTGGACAAG
CTTCTTTCCCGGATGGGCATAACTGCCCGCCCACAGTGGTTGAAATCCGC
GGTAGGGTCACCAAAGGACTCGCAGAAGAAGAGAAAGGGCAACCGCATGG
ATACTCTAGACTTTTGGATTTTGACAGATGATGGAGTTTTAGAGATGCCT
GACGATCATGAATTCGATGTAGAAAGAGAGATGCGGAAAAGAGAAAGGAA
TCAGGCCGCTGGCTGGGAGGAATCCGATGAACGCCGGCTTGATGAGAAAC
TCTACGGTTGGTGGAAAGTGGGAGGCTCCTGGGGCAATCAGGACCAGACC
TCTGACTATACACCGTCTGTTGGTGATTGGGAAGACACCACGAGCGTCAT
ATCGATGTCGACAACGGCCGACTCCGAGTGGGAAGGGTACGAATCCGACG
GCCGTCGCACTCCCACTCAAGAAGACCCCTTTCCAGGTCGTTTCTCCCGA
GAAAGTACTCCGGCTCATGAACCGCTCGTGGATATCGGCGCCTTGGCACG
ACTGCTGGATCCTCGCGATCAAGAAAGCAGGCACGAAGCGCGCATATTGT
CTGCTCACCTGGCTGCCGGCCGTGAGGGTCGGATAATGACCCGTCGGCAG
TTCCAGAAGCACGTTGAACGCGACCGAGCCCAAATTTTGCTAAGCTCACG
ATTGGCACGGCCTTCCACATATGAATCTACTAACGGCAAGCGCAAGCCTA
CCTCCGAGGAAGAAGCTGAGCTTCTCGAAAACCTCATCCTTTCGCGAAGA
GCCGAGATGTCATCCGCTCGAAGCACAGACGAGCAGACGTGGGAATCGGG
CGCCTCGGGTCTTGGTCCTAGCGGGCCGCCATGCGTCATTTGCCAGACCA
ACCCACGGTCCATCATCACCTGGCCATGTCGGTGTCTCTGTATTTGCGAA
GATTGCCGTGTCAGTCTTGCGATGAATAACTTTGGAAATTGTGTGACATG
CCGCCAGGACGTTGCAGGCTATGTCCGGCTATGGGTCCCATAAATGTCCA
TACTGCCCTCGGCCGCTTCCGCCGCAACTGCTTCATTAACTGCTGCGCAG
TCCCTGAACACCACTTCATCGATCGCCGCCCATTCCTCATTGTCCTCGTC
GTCGCGCGAACTACTGTCGCTTCCATTTCGTGGGCTCTACCAGGCAGAGG
CTTTTACATTCTCTACCGTGCCTAAGCAGATCGCTAAGCTAGTTGGGCTG
CAAGATATGGCGACACGATTTTGGGGGGCAGCTCCTGGGACGGGGCTGGA
GCCTGAAGCAGTACTGGCAACGCAGACAGCGGCTGAGGCTGTCAGAGACG
GCGTTGTTGATGCTGCTGCTCAGGCTGACTCCAGTCTCCATTTCTCCGAC
ATCCTCCAGGCAGTCATGAAATTTAGTGGTTTCTTCTCGTATCTGACAAG
CCGTTGGTCGTTAACCTGCTTTACCGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002860-T1.utr3p1 | KJC3_002860-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002860-T1.utr5p1 | KJC3_002860-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013083 |
| DBxref | PFAM:PF13920 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3776641..3780102 - |
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