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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3802987..3805308+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002869-T1 ID=KJC3_002869-T1|Name=KJC3_002869-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2322bp|location=Sequence derived from alignment at ch2:3802987..3805308+ (Aspergillus niger KJC3)
CGTCACCCTATTCCCCCGGTTTCCAGCTTGACCCTCCTGAAGGAGGGAGG
CCCTTGAGGCAGGGGAGTCCGTTTATTCCCGCTGACAAGGGTCTTCTGCT
GGAATGTTCGAAGCTTACAATGAAGTATTTCATATGGCCACCTTGAAATG
TCGTTCATAAGACAGCCTGGCATACTCCGTCCTGCTATCTCAACATGATG
TACCTGTGGGGTGTTTCCCCATACTCACTCTCGCACCCCAATACGGTATA
TGGATCCGTTTCCATCTACTAGTGACATTCTAGAACCCTACATACGTATG
TGATTCGCGACAGATCAACTTAGCTCAAGGAAGCGGTGTGACGCCTCCGG
GTCTTCCCAGATAAGCGGGAGATCTGACCCGACGCGGAGCGTCACAGAAT
GTCTCCACAACTGTTGCCTTCGAATGACGCGATCTTCGCTGACACCATCC
TCGGACCCGCTATTATTTGGGGGAGGCTCCTCCGAAACGTCGTTCTGTGT
CCCCATGGATACATAGTTGCTTGATCAGCCGCTTGGGTGATATTCTCCAG
CGATGGTGCAATACCCGCCTGTCCCGAATTTTGGGCAATGCTTGATTGTG
TCCGGCTATCTCTCCCCTTGACGATGGAGTGGAGGATGTGGCCTCTTCGT
TCTCTTGTTGTGCTCTTATTCCTATATAAACCCAGATTCTTTCATCCTGC
ATCGAATATCGGTCCTTGTGTCACTTAAGTCCCCATTCAAACACATCTTG
TTAGTATCGTTCTCACAAGCATATTTGTACATCACAATCAACTTTGCCGC
ATAAACCATGGCGCCATCACTCGTGGACCCCGTGGTAACCCACCCAGTCG
GCCGCCTTCCCGTAATTAAGAAGGAAACCACAGATGACAACAAATTTGGT
TACCAGCCAGGCCGAACTGTTGTGGAAAATCATGACAACTATCAGTACCA
AGACCTTCTCCCTACTTTCCCTAATCTTCATTGGCCTCCGCTAGAGGAGA
CACCGTATGAGGATAGGGGTATCTATGGAGACGCCAAGTTCCGAAATCTA
CTCCAAGACGCAACAGACGTCTTTGATTACACCCCCAAGATTGGAACCGA
GGTTCACGGAGTGAATCTGGCGAAGCTGAATGATGCACAGAAGGATGACT
TGGCTCGTTTGGTAGCTGTTCGCGGTGTGGTTTTCTTCCGAGGACAGGAT
GACTTGGATATCGATGCCCAGCGTGAGCTGGGTAGACATTTTGGGAAGCT
TCACAAGGTATGCATGGTCTGCATAAAATTATAATAGTTTACTTCTAACA
TCATTGCTTTCCAGCACGCAACCACGTCTGTCCCGAAAAGAGAGGGCTTG
GAGGACGTTCACGTCGTCTACACCGGAGACAACTCCACTGACCAGCGAGC
AATGTTCACACCCAGTTTCCTTTGGCACTCAGACGTATGGGCTTCCCTTG
CTTGTGACCCCGGATATTTGGCTGATAAGATATACTAGGTTACGTATGAA
GTCCAGCCTCCCTCATACACATCGCTCAAGGTCTTGACCGGCCCGCCACG
GGGAGGTGGTGGTGATACGCTCTGGACATCACAATACGCGGCATATGATG
CACTATCTCCTCACATGCAAACATACCTCAAGGGTCTGACTGCTCTACAC
TCGGCGGATATGCAGGCCTCTGATTCGCATGCTCTTGGTCGACCTGTCCG
TCGGGATCCGGTTACCACAGAACACCCTCTTATTCGGACGAACCCTGTCA
CTGGCTGGAACAGTTTATTCTTCAATCCTGGCTTCGTCACAAAGATTGTG
GGAATCCCTAAGACCGAAAGCGACGCTATCATCAGATATCTCACCGAAGT
TATTGCGACAACTCAAGAGATGCACGCGCGATTCCAGTGGAACAAGAATG
ATGTCGCTATTTGGGACAATAGGACAACTGTGAGTATCATGCCTCTCGCA
GTATCTCTGGGCTATAAGCTAATTATTGATAGAACCACTCTGCCTCTTAT
GGATTCGCTCCTCACCGTCGTCATGCTGTTCGCGTCTGCTGCCACGCAGA
GCGCCCCGTCTTGGATCCGGCAGGAAAATCGCAAGAAGAGGAATTCATTG
CTCTTTACAACCTGCCTCCTGTTAACAAGGATGGCTCCCGCCAGTCTAAT
TACAATGACTGATCCACCAAGACTGGCAAATTATTTGCGTATTCTGGATG
TTTAGCGTGATTTAAGGTTTTGAGGGAACATGAGAGCTGGCTCTCGGGAC
TTTCGATCTGATATTTAGATAACTAGCGATACATTTCGGCGTCTTGAAAC
TTAGGAGTACATAAATCCGGGC back to topCoding sequence (CDS) from alignment at ch2:3802987..3805308+ >KJC3_002869-T1 ID=KJC3_002869-T1|Name=KJC3_002869-T1|organism=Aspergillus niger KJC3|type=CDS|length=4764bp|location=Sequence derived from alignment at ch2:3802987..3805308+ (Aspergillus niger KJC3)
ATGGCGCCATCACTCGTGGACCCCGTGGTAACCCACCCAGTCGGCCGCCT
TCCCGTAATTAAGAAGGAAACCACAGATGACAACAAATTTGGTTACCAGC
CAGGCCGAACTGTTGTGGAAAATCATGACAACTATCAGTACCAAGACCTT
CTCCCTACTTTCCCTAATCTTCATTGGCCTCCGCTAGAGGAGACACCGTA
TGAGGATAGGGGTATCTATGGAGACGCCAAGTTCCGAAATCTACTCCAAG
ACGCAACAGACGTCTTTGATTACACCCCCAAGATTGGAACCGAGGTTCAC
GGAGTGAATCTGGCGAAGCTGAATGATGCACAGAAGGATGACTTGGCTCG
TTTGGTAGCTGTTCGCGGTGTGGTTTTCTTCCGAGGACAGGATGACTTGG
ATATCGATGCCCAGCGTGAGCTGGGTAGACATTTTGGGAAGCTTCACAAG
CACGCAACCACGTCTGTCCCGAAAAGAGAGGGCTTGGAGGACGTTCACGT
CGTCTACACCGGAGACAACTCCACTGACCAGCGAGCAATGTTCACACCCA
GTTTCCTTTGGCACTCAGACGTTACGTATGAAGTCCAGCCTCCCTCATAC
ACATCGCTCAAGGTCTTGACCGGCCCGCCACGGGGAGGTGGTGGTGATAC
GCTCTGGACATCACAATACGCGGCATATGATGCACTATCTCCTCACATGC
AAACATACCTCAAGGGTCTGACTGCTCTACACTCGGCGGATATGCAGGCC
TCTGATTCGCATGCTCTTGGTCGACCTGTCCGTCGGGATCCGGTTACCAC
AGAACACCCTCTTATTCGGACGAACCCTGTCACTGGCTGGAACAGTTTAT
TCTTCAATCCTGGCTTCGTCACAAAGATTGTGGGAATCCCTAAGACCGAA
AGCGACGCTATCATCAGATATCTCACCGAAGTTATTGCGACAACTCAAGA
GATGCACGCGCGATTCCAGTGGAACAAGAATGATGTCGCTATTTGGGACA
ATAGGACAACTAACCACTCTGCCTCTTATGGATTCGCTCCTCACCGTCGT
CATGCTGTTCGCGTCTGCTGCCACGCAGAGCGCCCCGTCTTGGATCCGGC
AGGAAAATCGCAAGAAGAGGAATTCATTGCTCTTTACAACCTGCCTCCTG
TTAACAAGGATGGCTCCCGCCAGTCTAATTACAATGACTGAATGGCGCCA
TCACTCGTGGACCCCGTGGTAACCCACCCAGTCGGCCGCCTTCCCGTAAT
TAAGAAGGAAACCACAGATGACAACAAATTTGGTTACCAGCCAGGCCGAA
CTGTTGTGGAAAATCATGACAACTATCAGTACCAAGACCTTCTCCCTACT
TTCCCTAATCTTCATTGGCCTCCGCTAGAGGAGACACCGTATGAGGATAG
GGGTATCTATGGAGACGCCAAGTTCCGAAATCTACTCCAAGACGCAACAG
ACGTCTTTGATTACACCCCCAAGATTGGAACCGAGGTTCACGGAGTGAAT
CTGGCGAAGCTGAATGATGCACAGAAGGATGACTTGGCTCGTTTGGTAGC
TGTTCGCGGTGTGGTTTTCTTCCGAGGACAGGATGACTTGGATATCGATG
CCCAGCGTGAGCTGGGTAGACATTTTGGGAAGCTTCACAAGCACGCAACC
ACGTCTGTCCCGAAAAGAGAGGGCTTGGAGGACGTTCACGTCGTCTACAC
CGGAGACAACTCCACTGACCAGCGAGCAATGTTCACACCCAGTTTCCTTT
GGCACTCAGACGTTACGTATGAAGTCCAGCCTCCCTCATACACATCGCTC
AAGGTCTTGACCGGCCCGCCACGGGGAGGTGGTGGTGATACGCTCTGGAC
ATCACAATACGCGGCATATGATGCACTATCTCCTCACATGCAAACATACC
TCAAGGGTCTGACTGCTCTACACTCGGCGGATATGCAGGCCTCTGATTCG
CATGCTCTTGGTCGACCTGTCCGTCGGGATCCGGTTACCACAGAACACCC
TCTTATTCGGACGAACCCTGTCACTGGCTGGAACAGTTTATTCTTCAATC
CTGGCTTCGTCACAAAGATTGTGGGAATCCCTAAGACCGAAAGCGACGCT
ATCATCAGATATCTCACCGAAGTTATTGCGACAACTCAAGAGATGCACGC
GCGATTCCAGTGGAACAAGAATGATGTCGCTATTTGGGACAATAGGACAA
CTAACCACTCTGCCTCTTATGGATTCGCTCCTCACCGTCGTCATGCTGTT
CGCGTCTGCTGCCACGCAGAGCGCCCCGTCTTGGATCCGGCAGGAAAATC
GCAAGAAGAGGAATTCATTGCTCTTTACAACCTGCCTCCTGTTAACAAGG
ATGGCTCCCGCCAGTCTAATTACAATGACTGAATGGCGCCATCACTCGTG
GACCCCGTGGTAACCCACCCAGTCGGCCGCCTTCCCGTAATTAAGAAGGA
AACCACAGATGACAACAAATTTGGTTACCAGCCAGGCCGAACTGTTGTGG
AAAATCATGACAACTATCAGTACCAAGACCTTCTCCCTACTTTCCCTAAT
CTTCATTGGCCTCCGCTAGAGGAGACACCGTATGAGGATAGGGGTATCTA
TGGAGACGCCAAGTTCCGAAATCTACTCCAAGACGCAACAGACGTCTTTG
ATTACACCCCCAAGATTGGAACCGAGGTTCACGGAGTGAATCTGGCGAAG
CTGAATGATGCACAGAAGGATGACTTGGCTCGTTTGGTAGCTGTTCGCGG
TGTGGTTTTCTTCCGAGGACAGGATGACTTGGATATCGATGCCCAGCGTG
AGCTGGGTAGACATTTTGGGAAGCTTCACAAGCACGCAACCACGTCTGTC
CCGAAAAGAGAGGGCTTGGAGGACGTTCACGTCGTCTACACCGGAGACAA
CTCCACTGACCAGCGAGCAATGTTCACACCCAGTTTCCTTTGGCACTCAG
ACGTTACGTATGAAGTCCAGCCTCCCTCATACACATCGCTCAAGGTCTTG
ACCGGCCCGCCACGGGGAGGTGGTGGTGATACGCTCTGGACATCACAATA
CGCGGCATATGATGCACTATCTCCTCACATGCAAACATACCTCAAGGGTC
TGACTGCTCTACACTCGGCGGATATGCAGGCCTCTGATTCGCATGCTCTT
GGTCGACCTGTCCGTCGGGATCCGGTTACCACAGAACACCCTCTTATTCG
GACGAACCCTGTCACTGGCTGGAACAGTTTATTCTTCAATCCTGGCTTCG
TCACAAAGATTGTGGGAATCCCTAAGACCGAAAGCGACGCTATCATCAGA
TATCTCACCGAAGTTATTGCGACAACTCAAGAGATGCACGCGCGATTCCA
GTGGAACAAGAATGATGTCGCTATTTGGGACAATAGGACAACTAACCACT
CTGCCTCTTATGGATTCGCTCCTCACCGTCGTCATGCTGTTCGCGTCTGC
TGCCACGCAGAGCGCCCCGTCTTGGATCCGGCAGGAAAATCGCAAGAAGA
GGAATTCATTGCTCTTTACAACCTGCCTCCTGTTAACAAGGATGGCTCCC
GCCAGTCTAATTACAATGACTGAATGGCGCCATCACTCGTGGACCCCGTG
GTAACCCACCCAGTCGGCCGCCTTCCCGTAATTAAGAAGGAAACCACAGA
TGACAACAAATTTGGTTACCAGCCAGGCCGAACTGTTGTGGAAAATCATG
ACAACTATCAGTACCAAGACCTTCTCCCTACTTTCCCTAATCTTCATTGG
CCTCCGCTAGAGGAGACACCGTATGAGGATAGGGGTATCTATGGAGACGC
CAAGTTCCGAAATCTACTCCAAGACGCAACAGACGTCTTTGATTACACCC
CCAAGATTGGAACCGAGGTTCACGGAGTGAATCTGGCGAAGCTGAATGAT
GCACAGAAGGATGACTTGGCTCGTTTGGTAGCTGTTCGCGGTGTGGTTTT
CTTCCGAGGACAGGATGACTTGGATATCGATGCCCAGCGTGAGCTGGGTA
GACATTTTGGGAAGCTTCACAAGCACGCAACCACGTCTGTCCCGAAAAGA
GAGGGCTTGGAGGACGTTCACGTCGTCTACACCGGAGACAACTCCACTGA
CCAGCGAGCAATGTTCACACCCAGTTTCCTTTGGCACTCAGACGTTACGT
ATGAAGTCCAGCCTCCCTCATACACATCGCTCAAGGTCTTGACCGGCCCG
CCACGGGGAGGTGGTGGTGATACGCTCTGGACATCACAATACGCGGCATA
TGATGCACTATCTCCTCACATGCAAACATACCTCAAGGGTCTGACTGCTC
TACACTCGGCGGATATGCAGGCCTCTGATTCGCATGCTCTTGGTCGACCT
GTCCGTCGGGATCCGGTTACCACAGAACACCCTCTTATTCGGACGAACCC
TGTCACTGGCTGGAACAGTTTATTCTTCAATCCTGGCTTCGTCACAAAGA
TTGTGGGAATCCCTAAGACCGAAAGCGACGCTATCATCAGATATCTCACC
GAAGTTATTGCGACAACTCAAGAGATGCACGCGCGATTCCAGTGGAACAA
GAATGATGTCGCTATTTGGGACAATAGGACAACTAACCACTCTGCCTCTT
ATGGATTCGCTCCTCACCGTCGTCATGCTGTTCGCGTCTGCTGCCACGCA
GAGCGCCCCGTCTTGGATCCGGCAGGAAAATCGCAAGAAGAGGAATTCAT
TGCTCTTTACAACCTGCCTCCTGTTAACAAGGATGGCTCCCGCCAGTCTA
ATTACAATGACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002869-T1.utr5p1 | KJC3_002869-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002869-T1.utr3p1 | KJC3_002869-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR042098 |
| DBxref | InterPro:IPR003819 |
| DBxref | PFAM:PF02668 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3802987..3805308 + |
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