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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3823725..3824693+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002877-T1 ID=KJC3_002877-T1|Name=KJC3_002877-T1|organism=Aspergillus niger KJC3|type=mRNA|length=969bp|location=Sequence derived from alignment at ch2:3823725..3824693+ (Aspergillus niger KJC3)
GCTTAATAGAACTGCTATCCTCCAGCTCTCCAACAATATTCAATCGATCT
CAAAATTCCGAACCATTCAATCACCACATCGCCGATAAAATCACACGCGC
ATTCTACCAGGAGGTCGCGCGCAACAATCATCACCCGAACTCATACCTCA
AACCACCTCCAAGCACACTCACTCAACCAATCTACCACCACTACAATACA
GTCACCCCAAACCCTCCTTCAAATACTATTGAAATACTAAACAATGGTCC
GCCTAAAACACCGCTACATCCTCCTCGACATCCTCTACCCCGATCCCTCA
ACATGGCCCCCAGCCGCCTCCCGCACCAATAAGAACCCTCTATCCAAATC
AAAGTCGCAAGCACAGCTACAAATCCATTCGCCCACATCCGATGCCCTAA
CACCGGGCCTGCTAGCGAAAATGGTCAGAGAGGAAGTCTCACTCATGTTT
GGCGATTACGGCGTCGGTAGATTGGGTGGTGCGGGCGCGGGGGGTATTAG
TGGTATGTTTTCCTTCTCCTCTAGCTCTATTCCTCTTTGAATTGGGTTTT
TTTGCCTGCTGGGTTGTGATAATGAGACTAATTACTTGTTTGATGAATAT
CCAGTGAAATACCTCTCCCCTGCTACTTCGACGGCTATTATTCGGTGTCC
TCGCGCGTCGTTCCGGCTTGTGTGGACGGCGCTGACCTGCATGTCGCAGG
TTCCGGGGTTTAGTGAGGGTGGGTCGAAGAGGACGACGAGAGCTTGTGTG
TTTCGGGTTATTAGGGTGTCCGGGACGATGCGGAAGGCGGAGGAGGAGGC
GATTCGGAGGGCGAGGAGGGAGATTGTGCGGTTGAGGGAGGCGGAGGAGA
GTGGGGTTTTGGAGGGGTTGTTGGGGGGTTTAGTGGATGTGGCTGGGGAG
GAGAGTACGCCGGTTACTGGGGAGGATGTGGTTGGGGATGTGATGATGGA
GAGTGAGGATGATGATTGA back to topCoding sequence (CDS) from alignment at ch2:3823725..3824693+ >KJC3_002877-T1 ID=KJC3_002877-T1|Name=KJC3_002877-T1|organism=Aspergillus niger KJC3|type=CDS|length=1248bp|location=Sequence derived from alignment at ch2:3823725..3824693+ (Aspergillus niger KJC3)
ATGGTCCGCCTAAAACACCGCTACATCCTCCTCGACATCCTCTACCCCGA
TCCCTCAACATGGCCCCCAGCCGCCTCCCGCACCAATAAGAACCCTCTAT
CCAAATCAAAGTCGCAAGCACAGCTACAAATCCATTCGCCCACATCCGAT
GCCCTAACACCGGGCCTGCTAGCGAAAATGGTCAGAGAGGAAGTCTCACT
CATGTTTGGCGATTACGGCGTCGGTAGATTGGGTGGTGCGGGCGCGGGGG
GTATTAGTGTGAAATACCTCTCCCCTGCTACTTCGACGGCTATTATTCGG
TGTCCTCGCGCGTCGTTCCGGCTTGTGTGGACGGCGCTGACCTGCATGTC
GCAGGTTCCGGGGTTTAGTGAGGGTGGGTCGAAGAGGACGACGAGAGCTT
GTGTGTTTCGGGTTATTAGGGTGTCCGGGACGATGCGGAAGGCGGAGGAG
GAGGCGATTCGGAGGGCGAGGAGGGAGATTGTGCGGTTGAGGGAGGCGGA
GGAGAGTGGGGTTTTGGAGGGGTTGTTGGGGGGTTTAGTGGATGTGGCTG
GGGAGGAGAGTACGCCGGTTACTGGGGAGGATGTGGTTGGGGATGTGATG
ATGGAGAGTGAGGATGATGATTGAATGGTCCGCCTAAAACACCGCTACAT
CCTCCTCGACATCCTCTACCCCGATCCCTCAACATGGCCCCCAGCCGCCT
CCCGCACCAATAAGAACCCTCTATCCAAATCAAAGTCGCAAGCACAGCTA
CAAATCCATTCGCCCACATCCGATGCCCTAACACCGGGCCTGCTAGCGAA
AATGGTCAGAGAGGAAGTCTCACTCATGTTTGGCGATTACGGCGTCGGTA
GATTGGGTGGTGCGGGCGCGGGGGGTATTAGTGTGAAATACCTCTCCCCT
GCTACTTCGACGGCTATTATTCGGTGTCCTCGCGCGTCGTTCCGGCTTGT
GTGGACGGCGCTGACCTGCATGTCGCAGGTTCCGGGGTTTAGTGAGGGTG
GGTCGAAGAGGACGACGAGAGCTTGTGTGTTTCGGGTTATTAGGGTGTCC
GGGACGATGCGGAAGGCGGAGGAGGAGGCGATTCGGAGGGCGAGGAGGGA
GATTGTGCGGTTGAGGGAGGCGGAGGAGAGTGGGGTTTTGGAGGGGTTGT
TGGGGGGTTTAGTGGATGTGGCTGGGGAGGAGAGTACGCCGGTTACTGGG
GAGGATGTGGTTGGGGATGTGATGATGGAGAGTGAGGATGATGATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004540 | ribonuclease activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008033 | tRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002877-T1.utr5p1 | KJC3_002877-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002759 |
| DBxref | InterPro:IPR038085 |
| DBxref | PFAM:PF01900 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3823725..3824693 + |
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