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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3838956..3840898- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002885-T1 ID=KJC3_002885-T1|Name=KJC3_002885-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1943bp|location=Sequence derived from alignment at ch2:3838956..3840898- (Aspergillus niger KJC3)
CAGCTCACACCTCCCTTTCCCTATTCTCCCTCTTCCCAAGTCTTCCCCTC
CCCCAACCTTTGCCTTCATCTTTCTTCTTCTTTTCCCCCCCCCCAATCCC
TCCACATTTCTCCCCCCCTTATTTGCCCCTCTTATCTTTCTTCAATCTGT
AGGCGATAGGGTTTGCTGTCCCATCGTTGATCCGTCGTTCAATTTCCGTT
GGTGCACCGTGTCTCGTCCGACCGACCTGGTTCCCCTCTAAGAAATCCAC
GCCTCCCTCTCACGAGACCTCCCCTCCCCAGTTGGTCCCGCTCCACCACC
CCTCGGTTGCATTCGTCCTGAACTCGCTCTCTTTTCCCCCACCACCCTCA
TCTTCACTCGCGGTGGTTACTTTCAATGGACAATAACATGGAGATCGATA
CGGCGCGGTCGCCCGAACCTCACCACCTCTCCCCGACCACCGACCCGGGG
TCCATACCCACCCTCGACGGATGGATCGAAAGCTTGATGACCTGCAAGCA
ACTAGCGGAGGAAGATGTCCGGAGGCTTTGTGATCGGGTGTGTGCTGCTT
CTGCTGGGAACTTAGGTGTTTTTTGGAGATGAATAATCCTAATCGTGGTC
GTGTTTTTTTCTACATAGGCAAGAGAGGTTCTGCAGGATGAGTCGAACGT
GCAGCCCGTGGTATGTGATTGACTTTTCTGCTATTGTTGTTGTGGCCCTT
CCCGCGCTGCCCGGCCACTGGTCGTGGCCCCGCGGCCGTTGCGACCGATC
GGAACTGACTCTCTTCAATCTATAGAAATGTCCAGTAACTGTGTGCGGTG
ATATACACGGCCAGTTCCACGATCTGATGGAGCTCTTCCGCATTGGTGGC
CCCAATCCGGATACAAACTACCTGTTCATGGGTGAGTTGGCGCCTTGTGA
CCGCTTATGCCAGTCGTCCCCCTTGGCTCACCCGCCCGCCCACTAGGTGA
CTACGTCGACCGTGGTTACTACTCTGTAGAGACCGTCACGCTCCTTGTCT
GCCTCAAAATCCGTTACCCCCAGCGTATCACCATTCTGCGAGGAAACCAC
GAATCGCGCCAGATCACGCAAGTCTACGGCTTCTACGATGAGTGCCTGCG
CAAGTACGGCAACGCTAACGTGTGGAAATACTTCACCGACCTTTTCGACT
ACCTCCCCCTCACCGCACTTATCGAGAACCAGATCTTCTGTCTGCACGGC
GGTCTGAGTCCGTCGATCGACACCCTCGACAACATCCGCTCTCTGGATCG
GATTCAGGAGGTCCCGCACGAGGGTCCCATGTGCGACCTTCTGTGGAGTG
ATCCCGACGACCGATGCGGCTGGGGTATCTCTCCCCGTGGTGCTGGATAC
ACATTCGGGCAGGATATTTCGGAGGCATTTAATCACAACAATGGCTTGAC
TCTGGTGGCACGGGCGCACCAGCTGGTAATGGAGGGTTACAACTGGTCCC
AGGATAGAAATGTGGTCACGATTTTCTCCGGTATGCTGCTGCACGGCAAA
TTTTGGCTCTTGTCTCGCGGGATTGGTGGTTACGGCTAACCACATCTCTC
CAGCTCCTAACTACTGCTACCGCTGCGGTAACCAAGCCGCAATTATGGAA
ATTGACGAGCATCTGAAATATACCTTGTATGTGGTTGGCCCCATCATTGC
AAACTGGAGAAGAAATTACTGACACAATCTACAGCTTACAATTCGATCCC
TGCCCGCGCGCAGGAGAACCCATGGTCTCGAGGCGCACACCCGACTACTT
CCTGTGATTTGATTTTTGTGATAGACATAACCGGCTCACCTCTGGCAAGT
TGAGGTTCTCCGACCCTTCGAAAGGGCTCCTGGGACGTTTGGCAACGGAA
AGACACAACCAAAACGGTCTGGCCTAAATAATTGTATGTCCGTATTTCTG
ACCGTGTTGATACCAATTCATGAAAATAAAAGACGTACCGAGA back to topCoding sequence (CDS) from alignment at ch2:3838956..3840898- >KJC3_002885-T1 ID=KJC3_002885-T1|Name=KJC3_002885-T1|organism=Aspergillus niger KJC3|type=CDS|length=5940bp|location=Sequence derived from alignment at ch2:3838956..3840898- (Aspergillus niger KJC3)
CTTACAATTCGATCCCTGCCCGCGCGCAGGAGAACCCATGGTCTCGAGGC
GCACACCCGACTACTTCCTGTGACTCCTAACTACTGCTACCGCTGCGGTA
ACCAAGCCGCAATTATGGAAATTGACGAGCATCTGAAATATACCTTGTGA
CTACGTCGACCGTGGTTACTACTCTGTAGAGACCGTCACGCTCCTTGTCT
GCCTCAAAATCCGTTACCCCCAGCGTATCACCATTCTGCGAGGAAACCAC
GAATCGCGCCAGATCACGCAAGTCTACGGCTTCTACGATGAGTGCCTGCG
CAAGTACGGCAACGCTAACGTGTGGAAATACTTCACCGACCTTTTCGACT
ACCTCCCCCTCACCGCACTTATCGAGAACCAGATCTTCTGTCTGCACGGC
GGTCTGAGTCCGTCGATCGACACCCTCGACAACATCCGCTCTCTGGATCG
GATTCAGGAGGTCCCGCACGAGGGTCCCATGTGCGACCTTCTGTGGAGTG
ATCCCGACGACCGATGCGGCTGGGGTATCTCTCCCCGTGGTGCTGGATAC
ACATTCGGGCAGGATATTTCGGAGGCATTTAATCACAACAATGGCTTGAC
TCTGGTGGCACGGGCGCACCAGCTGGTAATGGAGGGTTACAACTGGTCCC
AGGATAGAAATGTGGTCACGATTTTCTCCGAAATGTCCAGTAACTGTGTG
CGGTGATATACACGGCCAGTTCCACGATCTGATGGAGCTCTTCCGCATTG
GTGGCCCCAATCCGGATACAAACTACCTGTTCATGGGCAAGAGAGGTTCT
GCAGGATGAGTCGAACGTGCAGCCCGTGATGGACAATAACATGGAGATCG
ATACGGCGCGGTCGCCCGAACCTCACCACCTCTCCCCGACCACCGACCCG
GGGTCCATACCCACCCTCGACGGATGGATCGAAAGCTTGATGACCTGCAA
GCAACTAGCGGAGGAAGATGTCCGGAGGCTTTGTGATCGGCTTACAATTC
GATCCCTGCCCGCGCGCAGGAGAACCCATGGTCTCGAGGCGCACACCCGA
CTACTTCCTGTGACTCCTAACTACTGCTACCGCTGCGGTAACCAAGCCGC
AATTATGGAAATTGACGAGCATCTGAAATATACCTTGTGACTACGTCGAC
CGTGGTTACTACTCTGTAGAGACCGTCACGCTCCTTGTCTGCCTCAAAAT
CCGTTACCCCCAGCGTATCACCATTCTGCGAGGAAACCACGAATCGCGCC
AGATCACGCAAGTCTACGGCTTCTACGATGAGTGCCTGCGCAAGTACGGC
AACGCTAACGTGTGGAAATACTTCACCGACCTTTTCGACTACCTCCCCCT
CACCGCACTTATCGAGAACCAGATCTTCTGTCTGCACGGCGGTCTGAGTC
CGTCGATCGACACCCTCGACAACATCCGCTCTCTGGATCGGATTCAGGAG
GTCCCGCACGAGGGTCCCATGTGCGACCTTCTGTGGAGTGATCCCGACGA
CCGATGCGGCTGGGGTATCTCTCCCCGTGGTGCTGGATACACATTCGGGC
AGGATATTTCGGAGGCATTTAATCACAACAATGGCTTGACTCTGGTGGCA
CGGGCGCACCAGCTGGTAATGGAGGGTTACAACTGGTCCCAGGATAGAAA
TGTGGTCACGATTTTCTCCGAAATGTCCAGTAACTGTGTGCGGTGATATA
CACGGCCAGTTCCACGATCTGATGGAGCTCTTCCGCATTGGTGGCCCCAA
TCCGGATACAAACTACCTGTTCATGGGCAAGAGAGGTTCTGCAGGATGAG
TCGAACGTGCAGCCCGTGATGGACAATAACATGGAGATCGATACGGCGCG
GTCGCCCGAACCTCACCACCTCTCCCCGACCACCGACCCGGGGTCCATAC
CCACCCTCGACGGATGGATCGAAAGCTTGATGACCTGCAAGCAACTAGCG
GAGGAAGATGTCCGGAGGCTTTGTGATCGGCTTACAATTCGATCCCTGCC
CGCGCGCAGGAGAACCCATGGTCTCGAGGCGCACACCCGACTACTTCCTG
TGACTCCTAACTACTGCTACCGCTGCGGTAACCAAGCCGCAATTATGGAA
ATTGACGAGCATCTGAAATATACCTTGTGACTACGTCGACCGTGGTTACT
ACTCTGTAGAGACCGTCACGCTCCTTGTCTGCCTCAAAATCCGTTACCCC
CAGCGTATCACCATTCTGCGAGGAAACCACGAATCGCGCCAGATCACGCA
AGTCTACGGCTTCTACGATGAGTGCCTGCGCAAGTACGGCAACGCTAACG
TGTGGAAATACTTCACCGACCTTTTCGACTACCTCCCCCTCACCGCACTT
ATCGAGAACCAGATCTTCTGTCTGCACGGCGGTCTGAGTCCGTCGATCGA
CACCCTCGACAACATCCGCTCTCTGGATCGGATTCAGGAGGTCCCGCACG
AGGGTCCCATGTGCGACCTTCTGTGGAGTGATCCCGACGACCGATGCGGC
TGGGGTATCTCTCCCCGTGGTGCTGGATACACATTCGGGCAGGATATTTC
GGAGGCATTTAATCACAACAATGGCTTGACTCTGGTGGCACGGGCGCACC
AGCTGGTAATGGAGGGTTACAACTGGTCCCAGGATAGAAATGTGGTCACG
ATTTTCTCCGAAATGTCCAGTAACTGTGTGCGGTGATATACACGGCCAGT
TCCACGATCTGATGGAGCTCTTCCGCATTGGTGGCCCCAATCCGGATACA
AACTACCTGTTCATGGGCAAGAGAGGTTCTGCAGGATGAGTCGAACGTGC
AGCCCGTGATGGACAATAACATGGAGATCGATACGGCGCGGTCGCCCGAA
CCTCACCACCTCTCCCCGACCACCGACCCGGGGTCCATACCCACCCTCGA
CGGATGGATCGAAAGCTTGATGACCTGCAAGCAACTAGCGGAGGAAGATG
TCCGGAGGCTTTGTGATCGGCTTACAATTCGATCCCTGCCCGCGCGCAGG
AGAACCCATGGTCTCGAGGCGCACACCCGACTACTTCCTGTGACTCCTAA
CTACTGCTACCGCTGCGGTAACCAAGCCGCAATTATGGAAATTGACGAGC
ATCTGAAATATACCTTGTGACTACGTCGACCGTGGTTACTACTCTGTAGA
GACCGTCACGCTCCTTGTCTGCCTCAAAATCCGTTACCCCCAGCGTATCA
CCATTCTGCGAGGAAACCACGAATCGCGCCAGATCACGCAAGTCTACGGC
TTCTACGATGAGTGCCTGCGCAAGTACGGCAACGCTAACGTGTGGAAATA
CTTCACCGACCTTTTCGACTACCTCCCCCTCACCGCACTTATCGAGAACC
AGATCTTCTGTCTGCACGGCGGTCTGAGTCCGTCGATCGACACCCTCGAC
AACATCCGCTCTCTGGATCGGATTCAGGAGGTCCCGCACGAGGGTCCCAT
GTGCGACCTTCTGTGGAGTGATCCCGACGACCGATGCGGCTGGGGTATCT
CTCCCCGTGGTGCTGGATACACATTCGGGCAGGATATTTCGGAGGCATTT
AATCACAACAATGGCTTGACTCTGGTGGCACGGGCGCACCAGCTGGTAAT
GGAGGGTTACAACTGGTCCCAGGATAGAAATGTGGTCACGATTTTCTCCG
AAATGTCCAGTAACTGTGTGCGGTGATATACACGGCCAGTTCCACGATCT
GATGGAGCTCTTCCGCATTGGTGGCCCCAATCCGGATACAAACTACCTGT
TCATGGGCAAGAGAGGTTCTGCAGGATGAGTCGAACGTGCAGCCCGTGAT
GGACAATAACATGGAGATCGATACGGCGCGGTCGCCCGAACCTCACCACC
TCTCCCCGACCACCGACCCGGGGTCCATACCCACCCTCGACGGATGGATC
GAAAGCTTGATGACCTGCAAGCAACTAGCGGAGGAAGATGTCCGGAGGCT
TTGTGATCGGCTTACAATTCGATCCCTGCCCGCGCGCAGGAGAACCCATG
GTCTCGAGGCGCACACCCGACTACTTCCTGTGACTCCTAACTACTGCTAC
CGCTGCGGTAACCAAGCCGCAATTATGGAAATTGACGAGCATCTGAAATA
TACCTTGTGACTACGTCGACCGTGGTTACTACTCTGTAGAGACCGTCACG
CTCCTTGTCTGCCTCAAAATCCGTTACCCCCAGCGTATCACCATTCTGCG
AGGAAACCACGAATCGCGCCAGATCACGCAAGTCTACGGCTTCTACGATG
AGTGCCTGCGCAAGTACGGCAACGCTAACGTGTGGAAATACTTCACCGAC
CTTTTCGACTACCTCCCCCTCACCGCACTTATCGAGAACCAGATCTTCTG
TCTGCACGGCGGTCTGAGTCCGTCGATCGACACCCTCGACAACATCCGCT
CTCTGGATCGGATTCAGGAGGTCCCGCACGAGGGTCCCATGTGCGACCTT
CTGTGGAGTGATCCCGACGACCGATGCGGCTGGGGTATCTCTCCCCGTGG
TGCTGGATACACATTCGGGCAGGATATTTCGGAGGCATTTAATCACAACA
ATGGCTTGACTCTGGTGGCACGGGCGCACCAGCTGGTAATGGAGGGTTAC
AACTGGTCCCAGGATAGAAATGTGGTCACGATTTTCTCCGAAATGTCCAG
TAACTGTGTGCGGTGATATACACGGCCAGTTCCACGATCTGATGGAGCTC
TTCCGCATTGGTGGCCCCAATCCGGATACAAACTACCTGTTCATGGGCAA
GAGAGGTTCTGCAGGATGAGTCGAACGTGCAGCCCGTGATGGACAATAAC
ATGGAGATCGATACGGCGCGGTCGCCCGAACCTCACCACCTCTCCCCGAC
CACCGACCCGGGGTCCATACCCACCCTCGACGGATGGATCGAAAGCTTGA
TGACCTGCAAGCAACTAGCGGAGGAAGATGTCCGGAGGCTTTGTGATCGG
CTTACAATTCGATCCCTGCCCGCGCGCAGGAGAACCCATGGTCTCGAGGC
GCACACCCGACTACTTCCTGTGACTCCTAACTACTGCTACCGCTGCGGTA
ACCAAGCCGCAATTATGGAAATTGACGAGCATCTGAAATATACCTTGTGA
CTACGTCGACCGTGGTTACTACTCTGTAGAGACCGTCACGCTCCTTGTCT
GCCTCAAAATCCGTTACCCCCAGCGTATCACCATTCTGCGAGGAAACCAC
GAATCGCGCCAGATCACGCAAGTCTACGGCTTCTACGATGAGTGCCTGCG
CAAGTACGGCAACGCTAACGTGTGGAAATACTTCACCGACCTTTTCGACT
ACCTCCCCCTCACCGCACTTATCGAGAACCAGATCTTCTGTCTGCACGGC
GGTCTGAGTCCGTCGATCGACACCCTCGACAACATCCGCTCTCTGGATCG
GATTCAGGAGGTCCCGCACGAGGGTCCCATGTGCGACCTTCTGTGGAGTG
ATCCCGACGACCGATGCGGCTGGGGTATCTCTCCCCGTGGTGCTGGATAC
ACATTCGGGCAGGATATTTCGGAGGCATTTAATCACAACAATGGCTTGAC
TCTGGTGGCACGGGCGCACCAGCTGGTAATGGAGGGTTACAACTGGTCCC
AGGATAGAAATGTGGTCACGATTTTCTCCGAAATGTCCAGTAACTGTGTG
CGGTGATATACACGGCCAGTTCCACGATCTGATGGAGCTCTTCCGCATTG
GTGGCCCCAATCCGGATACAAACTACCTGTTCATGGGCAAGAGAGGTTCT
GCAGGATGAGTCGAACGTGCAGCCCGTGATGGACAATAACATGGAGATCG
ATACGGCGCGGTCGCCCGAACCTCACCACCTCTCCCCGACCACCGACCCG
GGGTCCATACCCACCCTCGACGGATGGATCGAAAGCTTGATGACCTGCAA
GCAACTAGCGGAGGAAGATGTCCGGAGGCTTTGTGATCGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002885-T1.utr3p1 | KJC3_002885-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002885-T1.utr5p1 | KJC3_002885-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029052 |
| DBxref | InterPro:IPR004843 |
| DBxref | InterPro:IPR006186 |
| DBxref | PFAM:PF00149 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3838956..3840898 - |
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