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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3865160..3867422+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002896-T1 ID=KJC3_002896-T1|Name=KJC3_002896-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2263bp|location=Sequence derived from alignment at ch2:3865160..3867422+ (Aspergillus niger KJC3)
GTTACTTGAAGGCATCAACCAAACGGAACGCATATACAAAGCCAGACTCA
TCAAGAGCATTATATCATTCAATTTCCGTCCACAGACGGATCATTTCTGA
CTCCCAACAGAACAGGATAATATGCTCGTATGTGACTGATCTCGCCCCCA
GACTGACTGAACTGTAGCTCTACTATTAAATTCAACCGATAATCTCATTC
CTTCATCACTAGTAGCTTGTCGCCTCAACTACACAAAGTGGATCCATCCT
CATTTCGACATCGGCTCTTGATCCCCCCACCAACCCAGATCCTGCTTCCC
TTCCTTCTACAATCGAACCCTTGCAAACCTCGTGTTTTTGCACACGAACC
CGAACCAACCACACGCCAGCATGTCCACCCAAGTGCTCATAGTGGGTGGG
GGCATTGGAGGCCTGACGCTAGCAGCCATGTGTCGAAGGATTGGCGTGTC
TTGTCGGGTGCTAGAGCGAAGCGCTGCTCTTGAACCGGTGGGTGCCGGCA
TTTCACTGGCTCCTAATGCCCTACGGGCCCTGGACCAGATCGGTCTGTAC
GACTACGTGCGCCAGGAAGGCCAACCGGTCCGCAAGATCCGTGTCTACCG
GAATCAGACGCAGTGGAGTGAGATTGACTTCCAGTGGCTGGAACGTACTT
TTGGCTATCCCGTGTACTCGGTCGAACGGCATGGCTTCCATCGGCGACTG
TATGACGCTGCGGGGGGTTCTGAGACGGTCATCTTGGGGGCAGAAGTTGC
CAAGGTGATCCCTCCGCAGGAGGAGGCTGAAGGGGTATCGGTGGTCCTGA
AGGATGGGAGGCGATACACGGGGAATGTGCTAGTGGGTGCTGATGGGGTG
CGGTCAGTTGTGCGCCGGGCTCTCATGGCCACCATCAATTCACCTCCCGG
ACAAAGTGGAGCAGTTGGAGAAGACGAAGATGCAGCCGATGTCATTCAAT
TCACGGGCCGAGTGCATCTGTCTGGCTACACTCACCCACTCGATCACCTT
GGCCCCGCGGACGAAGGGATCGCTCATTGGATGCTGTATGATCGCTCAAT
TCTCACAACGTGGCCGTGCAGGGACCATCGTCAGTGGTTTGTTGGGGCAG
TGGTAGGGATCAAGATTTATGAAACATTGCTCTCACATCAGCTAAACTGT
GCCTCTAGCCCTCTAAGCTCAAGGACCCGAATCGCTCCGTCTGGAAACAT
GCCGATCACAACACTATCAATCAAGTCTATGGTTCCGAATATCACCCCTT
TGCCCCGGATTTTCACTTCCGTGACGGTGAGGACATTTATTATTAGCATC
CTGCCAGAATGACATGCTGACTACGATGATTGGAGCCTTCTAGTCGTCAA
ACACGCGGAACGTGTCGTTGCCAGCGATGTCTTCCATCAGACCACCTTTC
CCCCGATGGCGGCCGGTCGCATTGCTATGCTGGGCGACGGTAAGTAGCGG
CCTACCCACACTGCTTGCTTACAGGTCATTCAGGATGGCTTTGTCCCACT
AATGCAATAAGCAGCCTCTCATGCTATGACTTCGTTCTTCGGCCAGGTAA
GCCAGCCAAACGGGATTTTTCTAAATCCCAAAATGAGAATCACGTCCCCT
TCAAATCTGGCGCTGACAGGAACCACCTCCCTGTTCTTCGCTTGCCCTTG
CTGTGTTGGACGCTTTTTCTTTCCCGATCTTGTTGTTTGTTTATTTCTCA
TGTTCTGAATATATCTTTGATTACTTGCCTTTTAAGTTTCTTTTTTTCTC
TTCCTTTGCCCTTTCTGTCTGGCTCCACTTTCTGACACCCAAAATAGGGC
GCCTGCCAGGCCATCGAAGACGCGACGGAGCTGGCCAGTGCGTTGGGGAT
GATCGATGTCAGGCCCACTGACGCGGAGACGATCCTTCAAGGCTACCGTC
ACAGCCGGGAGCGCCGGGGCCGCGATTTAGTCGTATTTTCGGATCGATTT
GCCTTGCTCCATACCGGACGCCTGTTGGGAAGCTGGGGTCCCTTTGTTCG
GCAAATGGTATACACCTGGATGCCTCTCTGGGGTTGGAAGTGGGCCTTGC
AGTGGCTGTATGGCCATCAGCCGACTCTCGTGGAGCAGCGGAATGAGGCC
GTGAAGAAGACTGCCTGAGAGATGCGTCTTGTCCAATGGAGTTGTATTTA
GCCGAAACTGGGCAGGATTCTCCCCTGCAAGCGATGGTGGTATTGCCCAT
GTCTATAGAAGAGACTAGCGCACACGAGCAGACGAATCAGAATTAACATC
ACACACTGTGCCC back to topCoding sequence (CDS) from alignment at ch2:3865160..3867422+ >KJC3_002896-T1 ID=KJC3_002896-T1|Name=KJC3_002896-T1|organism=Aspergillus niger KJC3|type=CDS|length=6495bp|location=Sequence derived from alignment at ch2:3865160..3867422+ (Aspergillus niger KJC3)
ATGTCCACCCAAGTGCTCATAGTGGGTGGGGGCATTGGAGGCCTGACGCT
AGCAGCCATGTGTCGAAGGATTGGCGTGTCTTGTCGGGTGCTAGAGCGAA
GCGCTGCTCTTGAACCGGTGGGTGCCGGCATTTCACTGGCTCCTAATGCC
CTACGGGCCCTGGACCAGATCGGTCTGTACGACTACGTGCGCCAGGAAGG
CCAACCGGTCCGCAAGATCCGTGTCTACCGGAATCAGACGCAGTGGAGTG
AGATTGACTTCCAGTGGCTGGAACGTACTTTTGGCTATCCCGTGTACTCG
GTCGAACGGCATGGCTTCCATCGGCGACTGTATGACGCTGCGGGGGGTTC
TGAGACGGTCATCTTGGGGGCAGAAGTTGCCAAGGTGATCCCTCCGCAGG
AGGAGGCTGAAGGGGTATCGGTGGTCCTGAAGGATGGGAGGCGATACACG
GGGAATGTGCTAGTGGGTGCTGATGGGGTGCGGTCAGTTGTGCGCCGGGC
TCTCATGGCCACCATCAATTCACCTCCCGGACAAAGTGGAGCAGTTGGAG
AAGACGAAGATGCAGCCGATGTCATTCAATTCACGGGCCGAGTGCATCTG
TCTGGCTACACTCACCCACTCGATCACCTTGGCCCCGCGGACGAAGGGAT
CGCTCATTGGATGCTGTATGATCGCTCAATTCTCACAACGTGGCCGTGCA
GGGACCATCGTCAGTGGTTTGTTGGGGCAGTGCCCTCTAAGCTCAAGGAC
CCGAATCGCTCCGTCTGGAAACATGCCGATCACAACACTATCAATCAAGT
CTATGGTTCCGAATATCACCCCTTTGCCCCGGATTTTCACTTCCGTGACG
TCGTCAAACACGCGGAACGTGTCGTTGCCAGCGATGTCTTCCATCAGACC
ACCTTTCCCCCGATGGCGGCCGGTCGCATTGCTATGCTGGGCGACGCCTC
TCATGCTATGACTTCGTTCTTCGGCCAGGGCGCCTGCCAGGCCATCGAAG
ACGCGACGGAGCTGGCCAGTGCGTTGGGGATGATCGATGTCAGGCCCACT
GACGCGGAGACGATCCTTCAAGGCTACCGTCACAGCCGGGAGCGCCGGGG
CCGCGATTTAGTCGTATTTTCGGATCGATTTGCCTTGCTCCATACCGGAC
GCCTGTTGGGAAGCTGGGGTCCCTTTGTTCGGCAAATGGTATACACCTGG
ATGCCTCTCTGGGGTTGGAAGTGGGCCTTGCAGTGGCTGTATGGCCATCA
GCCGACTCTCGTGGAGCAGCGGAATGAGGCCGTGAAGAAGACTGCCTGAA
TGTCCACCCAAGTGCTCATAGTGGGTGGGGGCATTGGAGGCCTGACGCTA
GCAGCCATGTGTCGAAGGATTGGCGTGTCTTGTCGGGTGCTAGAGCGAAG
CGCTGCTCTTGAACCGGTGGGTGCCGGCATTTCACTGGCTCCTAATGCCC
TACGGGCCCTGGACCAGATCGGTCTGTACGACTACGTGCGCCAGGAAGGC
CAACCGGTCCGCAAGATCCGTGTCTACCGGAATCAGACGCAGTGGAGTGA
GATTGACTTCCAGTGGCTGGAACGTACTTTTGGCTATCCCGTGTACTCGG
TCGAACGGCATGGCTTCCATCGGCGACTGTATGACGCTGCGGGGGGTTCT
GAGACGGTCATCTTGGGGGCAGAAGTTGCCAAGGTGATCCCTCCGCAGGA
GGAGGCTGAAGGGGTATCGGTGGTCCTGAAGGATGGGAGGCGATACACGG
GGAATGTGCTAGTGGGTGCTGATGGGGTGCGGTCAGTTGTGCGCCGGGCT
CTCATGGCCACCATCAATTCACCTCCCGGACAAAGTGGAGCAGTTGGAGA
AGACGAAGATGCAGCCGATGTCATTCAATTCACGGGCCGAGTGCATCTGT
CTGGCTACACTCACCCACTCGATCACCTTGGCCCCGCGGACGAAGGGATC
GCTCATTGGATGCTGTATGATCGCTCAATTCTCACAACGTGGCCGTGCAG
GGACCATCGTCAGTGGTTTGTTGGGGCAGTGCCCTCTAAGCTCAAGGACC
CGAATCGCTCCGTCTGGAAACATGCCGATCACAACACTATCAATCAAGTC
TATGGTTCCGAATATCACCCCTTTGCCCCGGATTTTCACTTCCGTGACGT
CGTCAAACACGCGGAACGTGTCGTTGCCAGCGATGTCTTCCATCAGACCA
CCTTTCCCCCGATGGCGGCCGGTCGCATTGCTATGCTGGGCGACGCCTCT
CATGCTATGACTTCGTTCTTCGGCCAGGGCGCCTGCCAGGCCATCGAAGA
CGCGACGGAGCTGGCCAGTGCGTTGGGGATGATCGATGTCAGGCCCACTG
ACGCGGAGACGATCCTTCAAGGCTACCGTCACAGCCGGGAGCGCCGGGGC
CGCGATTTAGTCGTATTTTCGGATCGATTTGCCTTGCTCCATACCGGACG
CCTGTTGGGAAGCTGGGGTCCCTTTGTTCGGCAAATGGTATACACCTGGA
TGCCTCTCTGGGGTTGGAAGTGGGCCTTGCAGTGGCTGTATGGCCATCAG
CCGACTCTCGTGGAGCAGCGGAATGAGGCCGTGAAGAAGACTGCCTGAAT
GTCCACCCAAGTGCTCATAGTGGGTGGGGGCATTGGAGGCCTGACGCTAG
CAGCCATGTGTCGAAGGATTGGCGTGTCTTGTCGGGTGCTAGAGCGAAGC
GCTGCTCTTGAACCGGTGGGTGCCGGCATTTCACTGGCTCCTAATGCCCT
ACGGGCCCTGGACCAGATCGGTCTGTACGACTACGTGCGCCAGGAAGGCC
AACCGGTCCGCAAGATCCGTGTCTACCGGAATCAGACGCAGTGGAGTGAG
ATTGACTTCCAGTGGCTGGAACGTACTTTTGGCTATCCCGTGTACTCGGT
CGAACGGCATGGCTTCCATCGGCGACTGTATGACGCTGCGGGGGGTTCTG
AGACGGTCATCTTGGGGGCAGAAGTTGCCAAGGTGATCCCTCCGCAGGAG
GAGGCTGAAGGGGTATCGGTGGTCCTGAAGGATGGGAGGCGATACACGGG
GAATGTGCTAGTGGGTGCTGATGGGGTGCGGTCAGTTGTGCGCCGGGCTC
TCATGGCCACCATCAATTCACCTCCCGGACAAAGTGGAGCAGTTGGAGAA
GACGAAGATGCAGCCGATGTCATTCAATTCACGGGCCGAGTGCATCTGTC
TGGCTACACTCACCCACTCGATCACCTTGGCCCCGCGGACGAAGGGATCG
CTCATTGGATGCTGTATGATCGCTCAATTCTCACAACGTGGCCGTGCAGG
GACCATCGTCAGTGGTTTGTTGGGGCAGTGCCCTCTAAGCTCAAGGACCC
GAATCGCTCCGTCTGGAAACATGCCGATCACAACACTATCAATCAAGTCT
ATGGTTCCGAATATCACCCCTTTGCCCCGGATTTTCACTTCCGTGACGTC
GTCAAACACGCGGAACGTGTCGTTGCCAGCGATGTCTTCCATCAGACCAC
CTTTCCCCCGATGGCGGCCGGTCGCATTGCTATGCTGGGCGACGCCTCTC
ATGCTATGACTTCGTTCTTCGGCCAGGGCGCCTGCCAGGCCATCGAAGAC
GCGACGGAGCTGGCCAGTGCGTTGGGGATGATCGATGTCAGGCCCACTGA
CGCGGAGACGATCCTTCAAGGCTACCGTCACAGCCGGGAGCGCCGGGGCC
GCGATTTAGTCGTATTTTCGGATCGATTTGCCTTGCTCCATACCGGACGC
CTGTTGGGAAGCTGGGGTCCCTTTGTTCGGCAAATGGTATACACCTGGAT
GCCTCTCTGGGGTTGGAAGTGGGCCTTGCAGTGGCTGTATGGCCATCAGC
CGACTCTCGTGGAGCAGCGGAATGAGGCCGTGAAGAAGACTGCCTGAATG
TCCACCCAAGTGCTCATAGTGGGTGGGGGCATTGGAGGCCTGACGCTAGC
AGCCATGTGTCGAAGGATTGGCGTGTCTTGTCGGGTGCTAGAGCGAAGCG
CTGCTCTTGAACCGGTGGGTGCCGGCATTTCACTGGCTCCTAATGCCCTA
CGGGCCCTGGACCAGATCGGTCTGTACGACTACGTGCGCCAGGAAGGCCA
ACCGGTCCGCAAGATCCGTGTCTACCGGAATCAGACGCAGTGGAGTGAGA
TTGACTTCCAGTGGCTGGAACGTACTTTTGGCTATCCCGTGTACTCGGTC
GAACGGCATGGCTTCCATCGGCGACTGTATGACGCTGCGGGGGGTTCTGA
GACGGTCATCTTGGGGGCAGAAGTTGCCAAGGTGATCCCTCCGCAGGAGG
AGGCTGAAGGGGTATCGGTGGTCCTGAAGGATGGGAGGCGATACACGGGG
AATGTGCTAGTGGGTGCTGATGGGGTGCGGTCAGTTGTGCGCCGGGCTCT
CATGGCCACCATCAATTCACCTCCCGGACAAAGTGGAGCAGTTGGAGAAG
ACGAAGATGCAGCCGATGTCATTCAATTCACGGGCCGAGTGCATCTGTCT
GGCTACACTCACCCACTCGATCACCTTGGCCCCGCGGACGAAGGGATCGC
TCATTGGATGCTGTATGATCGCTCAATTCTCACAACGTGGCCGTGCAGGG
ACCATCGTCAGTGGTTTGTTGGGGCAGTGCCCTCTAAGCTCAAGGACCCG
AATCGCTCCGTCTGGAAACATGCCGATCACAACACTATCAATCAAGTCTA
TGGTTCCGAATATCACCCCTTTGCCCCGGATTTTCACTTCCGTGACGTCG
TCAAACACGCGGAACGTGTCGTTGCCAGCGATGTCTTCCATCAGACCACC
TTTCCCCCGATGGCGGCCGGTCGCATTGCTATGCTGGGCGACGCCTCTCA
TGCTATGACTTCGTTCTTCGGCCAGGGCGCCTGCCAGGCCATCGAAGACG
CGACGGAGCTGGCCAGTGCGTTGGGGATGATCGATGTCAGGCCCACTGAC
GCGGAGACGATCCTTCAAGGCTACCGTCACAGCCGGGAGCGCCGGGGCCG
CGATTTAGTCGTATTTTCGGATCGATTTGCCTTGCTCCATACCGGACGCC
TGTTGGGAAGCTGGGGTCCCTTTGTTCGGCAAATGGTATACACCTGGATG
CCTCTCTGGGGTTGGAAGTGGGCCTTGCAGTGGCTGTATGGCCATCAGCC
GACTCTCGTGGAGCAGCGGAATGAGGCCGTGAAGAAGACTGCCTGAATGT
CCACCCAAGTGCTCATAGTGGGTGGGGGCATTGGAGGCCTGACGCTAGCA
GCCATGTGTCGAAGGATTGGCGTGTCTTGTCGGGTGCTAGAGCGAAGCGC
TGCTCTTGAACCGGTGGGTGCCGGCATTTCACTGGCTCCTAATGCCCTAC
GGGCCCTGGACCAGATCGGTCTGTACGACTACGTGCGCCAGGAAGGCCAA
CCGGTCCGCAAGATCCGTGTCTACCGGAATCAGACGCAGTGGAGTGAGAT
TGACTTCCAGTGGCTGGAACGTACTTTTGGCTATCCCGTGTACTCGGTCG
AACGGCATGGCTTCCATCGGCGACTGTATGACGCTGCGGGGGGTTCTGAG
ACGGTCATCTTGGGGGCAGAAGTTGCCAAGGTGATCCCTCCGCAGGAGGA
GGCTGAAGGGGTATCGGTGGTCCTGAAGGATGGGAGGCGATACACGGGGA
ATGTGCTAGTGGGTGCTGATGGGGTGCGGTCAGTTGTGCGCCGGGCTCTC
ATGGCCACCATCAATTCACCTCCCGGACAAAGTGGAGCAGTTGGAGAAGA
CGAAGATGCAGCCGATGTCATTCAATTCACGGGCCGAGTGCATCTGTCTG
GCTACACTCACCCACTCGATCACCTTGGCCCCGCGGACGAAGGGATCGCT
CATTGGATGCTGTATGATCGCTCAATTCTCACAACGTGGCCGTGCAGGGA
CCATCGTCAGTGGTTTGTTGGGGCAGTGCCCTCTAAGCTCAAGGACCCGA
ATCGCTCCGTCTGGAAACATGCCGATCACAACACTATCAATCAAGTCTAT
GGTTCCGAATATCACCCCTTTGCCCCGGATTTTCACTTCCGTGACGTCGT
CAAACACGCGGAACGTGTCGTTGCCAGCGATGTCTTCCATCAGACCACCT
TTCCCCCGATGGCGGCCGGTCGCATTGCTATGCTGGGCGACGCCTCTCAT
GCTATGACTTCGTTCTTCGGCCAGGGCGCCTGCCAGGCCATCGAAGACGC
GACGGAGCTGGCCAGTGCGTTGGGGATGATCGATGTCAGGCCCACTGACG
CGGAGACGATCCTTCAAGGCTACCGTCACAGCCGGGAGCGCCGGGGCCGC
GATTTAGTCGTATTTTCGGATCGATTTGCCTTGCTCCATACCGGACGCCT
GTTGGGAAGCTGGGGTCCCTTTGTTCGGCAAATGGTATACACCTGGATGC
CTCTCTGGGGTTGGAAGTGGGCCTTGCAGTGGCTGTATGGCCATCAGCCG
ACTCTCGTGGAGCAGCGGAATGAGGCCGTGAAGAAGACTGCCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002896-T1.utr5p1 | KJC3_002896-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002896-T1.utr3p1 | KJC3_002896-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.17 |
| Note | antiSMASH:Cluster_2.18 |
| Note | SMCOG1087:hypothetical protein |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR002938 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3865160..3867422 + |
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