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KJC3_002926-T1, KJC3_002926-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002926-T1
Unique NameKJC3_002926-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3964822..3965795-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002926-T1 ID=KJC3_002926-T1|Name=KJC3_002926-T1|organism=Aspergillus niger KJC3|type=mRNA|length=974bp|location=Sequence derived from alignment at ch2:3964822..3965795- (Aspergillus niger KJC3)
GATTCCTCTCCCACTCCCAACCGAAGAATGAGCCCTTGTCTCCATTGATG
GAAACCCCTCACCCTATGCCCTTAAGAGACGTGGCCAGATATGCCGCCCC
ATCACTTGCATGTAAGACTGTGAGTGCCTACCCCTACTCTTTACGACTAC
GACAATACTTTAGTCTGCGTTCATCCGAGTCCCCGAGACATTCCTCATCC
TCGCAGATCTCCCAACCCACCGTTGAAGTACCTGCCAATACGCTGAGTTC
CGCAACTCCGCATCAAACCATGCTTTTTACAGAGGTAGTCATTAATGCAG
CCCCGTGGGCTGTGCGGGAAGCTGTGAGTCCCCACCCACCTCTCCCTCGA
TGTTTGCTTGATGCTCACCCTCAGCGCCCATTTAGTTTCTCGATTTCGCA
GTTCTACCGACCTATCATACGAGCTTCTACCAGTGCATCGAGGTTCCCAA
TCAAAAAGGGGCCGCCAAGCCTGGTGACGGACTTGTTTGTACCATCGACA
ACATCCCGTATCCGGCAATCGTTGAGGTCAATACCGCCGGCGAGTTCACC
TGGAGGGGATATTTTGTTTGGAACTGGATCTTCAACGGTCTGCACAGTTT
TAAATTCGAGCCTCTTGGCGAGGACGCAAGCAGGACTCGGTTCGTGCAGT
GTGAAGAGCTTGGGGGTCTCTTGGCGGGGGCATTGTCGCTGGTTGGTCGA
CAGAGAATGCTGGCCGGGTTCTCCAGATTCAATGAAGATTTCAAGCGGCA
TGTGGAAAGGGCATATAATTCTGGACAGCTTGGACGCCCAGAACAGTAGA
CATGCACCGGCTACTGAAGTGTCAATTTTGACCCACAGCTAGGCTGGCAG
GACTTCATCGCAGCTCAGGAGGGCGCGGAAGGACACCTGGGTGAGGTGGT
GGCCTGACAGGAGGCTGATATGGTAATTGAGCTGAAGATGAGGGTTAAAT
TAGCAATGATGATATCACACTCGG
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Coding sequence (CDS) from alignment at ch2:3964822..3965795-

>KJC3_002926-T1 ID=KJC3_002926-T1|Name=KJC3_002926-T1|organism=Aspergillus niger KJC3|type=CDS|length=1380bp|location=Sequence derived from alignment at ch2:3964822..3965795- (Aspergillus niger KJC3)
TTTCTCGATTTCGCAGTTCTACCGACCTATCATACGAGCTTCTACCAGTG
CATCGAGGTTCCCAATCAAAAAGGGGCCGCCAAGCCTGGTGACGGACTTG
TTTGTACCATCGACAACATCCCGTATCCGGCAATCGTTGAGGTCAATACC
GCCGGCGAGTTCACCTGGAGGGGATATTTTGTTTGGAACTGGATCTTCAA
CGGTCTGCACAGTTTTAAATTCGAGCCTCTTGGCGAGGACGCAAGCAGGA
CTCGGTTCGTGCAGTGTGAAGAGCTTGGGGGTCTCTTGGCGGGGGCATTG
TCGCTGGTTGGTCGACAGAGAATGCTGGCCGGGTTCTCCAGATTCAATGA
AGATTTCAAGCGGCATGTGGAAAGGGCATATAATTCTGGACAGCTTGGAC
GCCCAGAACAGTAGATGGAAACCCCTCACCCTATGCCCTTAAGAGACGTG
GCCAGATATGCCGCCCCATCACTTGCATGTAAGACTGTGAGTGCCTACCC
CTACTCTTTACGACTACGACAATACTTTAGTCTGCGTTCATCCGAGTCCC
CGAGACATTCCTCATCCTCGCAGATCTCCCAACCCACCGTTGAAGTACCT
GCCAATACGCTGAGTTCCGCAACTCCGCATCAAACCATGCTTTTTACAGA
GGTAGTCATTAATGCAGCCCCGTGGGCTGTGCGGGAAGCTTTTCTCGATT
TCGCAGTTCTACCGACCTATCATACGAGCTTCTACCAGTGCATCGAGGTT
CCCAATCAAAAAGGGGCCGCCAAGCCTGGTGACGGACTTGTTTGTACCAT
CGACAACATCCCGTATCCGGCAATCGTTGAGGTCAATACCGCCGGCGAGT
TCACCTGGAGGGGATATTTTGTTTGGAACTGGATCTTCAACGGTCTGCAC
AGTTTTAAATTCGAGCCTCTTGGCGAGGACGCAAGCAGGACTCGGTTCGT
GCAGTGTGAAGAGCTTGGGGGTCTCTTGGCGGGGGCATTGTCGCTGGTTG
GTCGACAGAGAATGCTGGCCGGGTTCTCCAGATTCAATGAAGATTTCAAG
CGGCATGTGGAAAGGGCATATAATTCTGGACAGCTTGGACGCCCAGAACA
GTAGATGGAAACCCCTCACCCTATGCCCTTAAGAGACGTGGCCAGATATG
CCGCCCCATCACTTGCATGTAAGACTGTGAGTGCCTACCCCTACTCTTTA
CGACTACGACAATACTTTAGTCTGCGTTCATCCGAGTCCCCGAGACATTC
CTCATCCTCGCAGATCTCCCAACCCACCGTTGAAGTACCTGCCAATACGC
TGAGTTCCGCAACTCCGCATCAAACCATGCTTTTTACAGAGGTAGTCATT
AATGCAGCCCCGTGGGCTGTGCGGGAAGCT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002926KJC3_002926Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002926-T1KJC3_002926-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002926-T1.cdsKJC3_002926-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002926-T1.utr3p1KJC3_002926-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002926-T1.exon2KJC3_002926-T1.exon2Aspergillus niger KJC3exon
KJC3_002926-T1.exon1KJC3_002926-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002926-T1.utr5p1KJC3_002926-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_2.19
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3964822..3965795 -
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