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KJC3_002932-T1, KJC3_002932-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002932-T1
Unique NameKJC3_002932-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3976562..3977614+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002932-T1 ID=KJC3_002932-T1|Name=KJC3_002932-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1053bp|location=Sequence derived from alignment at ch2:3976562..3977614+ (Aspergillus niger KJC3)
ATGTCGTCTGCTCCTGATTATGTGATGGGCACGCAAGGCTTCGGGAGTGC
ATGGACCAAAGATAATGTATCCATGCTGGTGGAGGTACTGAATGCCGCTG
GTATAAACCATTATGACACAGCCTTACTATACCCGATGACGAGCCCAGGA
GCTTCCGAAAAGCTGCTAGGAAGCATTCGCCAGGACAATTTTGTGATCGA
TACCAAGATCCTATACCGACCCGAGGCTCTGCGAAGAGAGAACATGGAGG
AGTCAATTCGCCGTAGCTTCGAGAACCTCGGCATCTCAAAGGTAGACGCC
AACATGAATCGTGCAGCAAAGAGATTTTTGTGCTTACCACCAATATCGAT
GTAGATTGCCACCCTCTATGCTCATGCTCCAGACAAATCTGTCTCTATCG
CCGAACAAGCCGCCAATTTTGATCATTTCTACCGAGCTGGTTACTTTGAG
CACCTTGGGCTGTGCAACTACTCTCCCGCACAGCTGAGAGAGTGGGTTGA
AATTGCAACTGCAAACAGCTACGTTATCCCGAGCGTCTACCAGGGCCAGT
ACAACATCTTCTGCCGGCAGTATGAGAGGGAACTGTTCCCCGTCTTGCGT
CAGCACGGCATCAGATTTGTGGCCAATTCCCCGTTGGCCGGCGGCTTTGC
GACAGGGAAGCTAACCTTCGCGAAGGAGGCTGAGCAACTGCGAGGTACTC
GATTTGAGGAAAGTGAGGGAAATGTAATGGGCGATCTGTTCCGCATGTGG
TATGACAAGCCGGTCTTTCATGATGCGGTACGCGACATTGCAACCGGGGT
TGACGGATCGGCGGGCAAGGTTAGCAGCCTGGCGCAGGCAGCGGTGCGCT
GGTTGCTGTTCCACTCAAAACTGGAAAGCACCGACAATATCGCGATCGGC
CCTAGTACACTGGACCAGCTGAAAGAGTACCTTGCCGCACGCGCAGCGGG
ACCCCTGCCTGAGGAGTTGGCAAGGCAGATTGACTGGCTGTATGCATCGT
TGAGGGAAGAGGCTGCGCCGTTGGTGGAGGTTGGATGGTGGACAAAGTCC
TAA
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Coding sequence (CDS) from alignment at ch2:3976562..3977614+

>KJC3_002932-T1 ID=KJC3_002932-T1|Name=KJC3_002932-T1|organism=Aspergillus niger KJC3|type=CDS|length=1980bp|location=Sequence derived from alignment at ch2:3976562..3977614+ (Aspergillus niger KJC3)
ATGTCGTCTGCTCCTGATTATGTGATGGGCACGCAAGGCTTCGGGAGTGC
ATGGACCAAAGATAATGTATCCATGCTGGTGGAGGTACTGAATGCCGCTG
GTATAAACCATTATGACACAGCCTTACTATACCCGATGACGAGCCCAGGA
GCTTCCGAAAAGCTGCTAGGAAGCATTCGCCAGGACAATTTTGTGATCGA
TACCAAGATCCTATACCGACCCGAGGCTCTGCGAAGAGAGAACATGGAGG
AGTCAATTCGCCGTAGCTTCGAGAACCTCGGCATCTCAAAGATTGCCACC
CTCTATGCTCATGCTCCAGACAAATCTGTCTCTATCGCCGAACAAGCCGC
CAATTTTGATCATTTCTACCGAGCTGGTTACTTTGAGCACCTTGGGCTGT
GCAACTACTCTCCCGCACAGCTGAGAGAGTGGGTTGAAATTGCAACTGCA
AACAGCTACGTTATCCCGAGCGTCTACCAGGGCCAGTACAACATCTTCTG
CCGGCAGTATGAGAGGGAACTGTTCCCCGTCTTGCGTCAGCACGGCATCA
GATTTGTGGCCAATTCCCCGTTGGCCGGCGGCTTTGCGACAGGGAAGCTA
ACCTTCGCGAAGGAGGCTGAGCAACTGCGAGGTACTCGATTTGAGGAAAG
TGAGGGAAATGTAATGGGCGATCTGTTCCGCATGTGGTATGACAAGCCGG
TCTTTCATGATGCGGTACGCGACATTGCAACCGGGGTTGACGGATCGGCG
GGCAAGGTTAGCAGCCTGGCGCAGGCAGCGGTGCGCTGGTTGCTGTTCCA
CTCAAAACTGGAAAGCACCGACAATATCGCGATCGGCCCTAGTACACTGG
ACCAGCTGAAAGAGTACCTTGCCGCACGCGCAGCGGGACCCCTGCCTGAG
GAGTTGGCAAGGCAGATTGACTGGCTGTATGCATCGTTGAGGGAAGAGGC
TGCGCCGTTGGTGGAGGTTGGATGGTGGACAAAGTCCTAAATGTCGTCTG
CTCCTGATTATGTGATGGGCACGCAAGGCTTCGGGAGTGCATGGACCAAA
GATAATGTATCCATGCTGGTGGAGGTACTGAATGCCGCTGGTATAAACCA
TTATGACACAGCCTTACTATACCCGATGACGAGCCCAGGAGCTTCCGAAA
AGCTGCTAGGAAGCATTCGCCAGGACAATTTTGTGATCGATACCAAGATC
CTATACCGACCCGAGGCTCTGCGAAGAGAGAACATGGAGGAGTCAATTCG
CCGTAGCTTCGAGAACCTCGGCATCTCAAAGATTGCCACCCTCTATGCTC
ATGCTCCAGACAAATCTGTCTCTATCGCCGAACAAGCCGCCAATTTTGAT
CATTTCTACCGAGCTGGTTACTTTGAGCACCTTGGGCTGTGCAACTACTC
TCCCGCACAGCTGAGAGAGTGGGTTGAAATTGCAACTGCAAACAGCTACG
TTATCCCGAGCGTCTACCAGGGCCAGTACAACATCTTCTGCCGGCAGTAT
GAGAGGGAACTGTTCCCCGTCTTGCGTCAGCACGGCATCAGATTTGTGGC
CAATTCCCCGTTGGCCGGCGGCTTTGCGACAGGGAAGCTAACCTTCGCGA
AGGAGGCTGAGCAACTGCGAGGTACTCGATTTGAGGAAAGTGAGGGAAAT
GTAATGGGCGATCTGTTCCGCATGTGGTATGACAAGCCGGTCTTTCATGA
TGCGGTACGCGACATTGCAACCGGGGTTGACGGATCGGCGGGCAAGGTTA
GCAGCCTGGCGCAGGCAGCGGTGCGCTGGTTGCTGTTCCACTCAAAACTG
GAAAGCACCGACAATATCGCGATCGGCCCTAGTACACTGGACCAGCTGAA
AGAGTACCTTGCCGCACGCGCAGCGGGACCCCTGCCTGAGGAGTTGGCAA
GGCAGATTGACTGGCTGTATGCATCGTTGAGGGAAGAGGCTGCGCCGTTG
GTGGAGGTTGGATGGTGGACAAAGTCCTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002932KJC3_002932Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002932-T1.exon1KJC3_002932-T1.exon1Aspergillus niger KJC3exon
KJC3_002932-T1.exon2KJC3_002932-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002932-T1.cdsKJC3_002932-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002932-T1KJC3_002932-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036812
DBxrefInterPro:IPR023210
DBxrefPFAM:PF00248
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3976562..3977614 +
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