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KJC3_002941-T1, KJC3_002941-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002941-T1
Unique NameKJC3_002941-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3999578..4001267-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002941-T1 ID=KJC3_002941-T1|Name=KJC3_002941-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1690bp|location=Sequence derived from alignment at ch2:3999578..4001267- (Aspergillus niger KJC3)
CCCATTGTTTATGCCGTAGAGGTGACGGATGCTTTTTAATCTGCTCTCAT
CATACACCCAGTTGTCCGCTAACCAGCCCAAAAAGCAAAGTATGAAGTTT
TACACCATATTCGATCGCAACGATAAGGATATTAACATCAATATTTTAAA
CTCAAAGTATGGCACCCAGGGTACACATTAAGATCAATCATTTTCCGGTA
TCAGACTCGGGATCCGCGAGTACAATAGGGGCCAGCTTAAACCAGACCAA
TCCCATTATCACCGACAGCTTTCTGGATGGAGATGTCGTCATCTCCATGA
ACAATTTCAACGAAACCATCGACCGTTCTGCAATAGTCGAAGTTACTTTT
GAGGGTAAAACTAAGCCAGCACCTAGCTCAGTTCTAACACTAATTCATAT
TTACCAGGCAAGCTATCCACATCCATCCATCTGAACATCTCGACCCAACT
CCTCCGCATGGCTAAAAATCTCATTGTAAGAAGGTCCACCTTCTATATTT
CTGATTAGGATCTGCATCCTAATTGCCATCCAGCTCATCCGAGCATCTGA
CGTTCGCGAATTATATCAAGCCCCATCCGACACCATCTGCTCACCCTCCC
AAACCTTCATCCACCCTTTCCACTTCAACATCCCTTGGACGAGCGACCCA
AACTCATCCTCCTCCTCCTCCTTCGAAACCGGTGTTCCTCTTCCTCCATC
CCTCTCCTTCAAACCTATAGCCGCCTATGAGTCTAACGACCTCACTCTCC
GCGGCCACTGTTGCATAGAATACTGCCTCAAAGCCCGCCTCTTTAATCAA
AGCAGCTGTATCGCCGAAGCCGAGTTCCCAGTAACCCTTGTCCCCCCACA
AGAATGTCCTCCCCCCCCCTATCTGTATCACCGACTTTCCTCACGAATAT
ACTCTTAACTCATTTCAGCGCATTCGTGATCTCCTATCCCGCCGCGGTCT
ATGGCACCTGTCCGTTGAGACGGAGCAACCCACCTCGTTTCATCTTAATC
GCCTTAATAGGGCAGGGTTTGTCCCTTTGACATGGCGGTATCAGTGTTTA
GGCCCTTCAGGACATCATCAGATCATTCATCCGCCGGTTCTATTTGCCAA
CGTTCAAACATTTCTTAGCGCGACGACATTTATATCTGTTATATCCCAGT
CCCGCGTCCCGACCCGGACTGAAGCCAACAAATTAAAGAATTTCCGGCTC
CTCGCGGATACAACCCGAGTTGGGACTACACAAGTCCGCAAAGTACGGAT
TGCGTCGTGGAAACCTAAATTACGTGCGCATGATACTGGTATGTATCTTC
CATACCGTCACGTATCGACCGCAAACAAGAAACTAACCTCACATACCAAG
AAGGTACCACATCCCAGGATCAACCGGTATGGGAATCAACCGCCCATCTA
ATCTTCACCTTCGACGAGAACGATTACATGCCGCCTACCTTTACACATCC
TTATGTTTCGAGGAGGTATAGTTTAATTATCGGTATTGAAGTCGACAGTT
TTCGAGACACGAATTTTCAACTTCAAGTGCCGGTACACGTGTCCTATGAC
CGCAGACAGGGTAATGCCTCGTCTATCTGTGAGGATGTTCGGGTACCGTT
AGATGCACATATGGTGGATGAGGATGTATTGTTAGAAAGTTGTAGTCCGC
CGCCTTATATGGCTTGATATTATCCTTGCATATTCAGGTG
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Coding sequence (CDS) from alignment at ch2:3999578..4001267-

>KJC3_002941-T1 ID=KJC3_002941-T1|Name=KJC3_002941-T1|organism=Aspergillus niger KJC3|type=CDS|length=1917bp|location=Sequence derived from alignment at ch2:3999578..4001267- (Aspergillus niger KJC3)
CTCATCCGAGCATCTGACGTTCGCGAATTATATCAAGCCCCATCCGACAC
CATCTGCTCACCCTCCCAAACCTTCATCCACCCTTTCCACTTCAACATCC
CTTGGACGAGCGACCCAAACTCATCCTCCTCCTCCTCCTTCGAAACCGGT
GTTCCTCTTCCTCCATCCCTCTCCTTCAAACCTATAGCCGCCTATGAGTC
TAACGACCTCACTCTCCGCGGCCACTGTTGCATAGAATACTGCCTCAAAG
CCCGCCTCTTTAATCAAAGCAGCTGTATCGCCGAAGCCGAGTTCCCAGTA
ACCCTTGTCCCCCCACAAGAATGTCCTCCCCCCCCCTATCTGTATCACCG
ACTTTCCTCACGAATATACTCTTAAGCAAGCTATCCACATCCATCCATCT
GAACATCTCGACCCAACTCCTCCGCATGGCTAAAAATCTCATTATGGCAC
CCAGGGTACACATTAAGATCAATCATTTTCCGGTATCAGACTCGGGATCC
GCGAGTACAATAGGGGCCAGCTTAAACCAGACCAATCCCATTATCACCGA
CAGCTTTCTGGATGGAGATGTCGTCATCTCCATGAACAATTTCAACGAAA
CCATCGACCGTTCTGCAATAGTCGAAGTTACTTTTGAGGCTCATCCGAGC
ATCTGACGTTCGCGAATTATATCAAGCCCCATCCGACACCATCTGCTCAC
CCTCCCAAACCTTCATCCACCCTTTCCACTTCAACATCCCTTGGACGAGC
GACCCAAACTCATCCTCCTCCTCCTCCTTCGAAACCGGTGTTCCTCTTCC
TCCATCCCTCTCCTTCAAACCTATAGCCGCCTATGAGTCTAACGACCTCA
CTCTCCGCGGCCACTGTTGCATAGAATACTGCCTCAAAGCCCGCCTCTTT
AATCAAAGCAGCTGTATCGCCGAAGCCGAGTTCCCAGTAACCCTTGTCCC
CCCACAAGAATGTCCTCCCCCCCCCTATCTGTATCACCGACTTTCCTCAC
GAATATACTCTTAAGCAAGCTATCCACATCCATCCATCTGAACATCTCGA
CCCAACTCCTCCGCATGGCTAAAAATCTCATTATGGCACCCAGGGTACAC
ATTAAGATCAATCATTTTCCGGTATCAGACTCGGGATCCGCGAGTACAAT
AGGGGCCAGCTTAAACCAGACCAATCCCATTATCACCGACAGCTTTCTGG
ATGGAGATGTCGTCATCTCCATGAACAATTTCAACGAAACCATCGACCGT
TCTGCAATAGTCGAAGTTACTTTTGAGGCTCATCCGAGCATCTGACGTTC
GCGAATTATATCAAGCCCCATCCGACACCATCTGCTCACCCTCCCAAACC
TTCATCCACCCTTTCCACTTCAACATCCCTTGGACGAGCGACCCAAACTC
ATCCTCCTCCTCCTCCTTCGAAACCGGTGTTCCTCTTCCTCCATCCCTCT
CCTTCAAACCTATAGCCGCCTATGAGTCTAACGACCTCACTCTCCGCGGC
CACTGTTGCATAGAATACTGCCTCAAAGCCCGCCTCTTTAATCAAAGCAG
CTGTATCGCCGAAGCCGAGTTCCCAGTAACCCTTGTCCCCCCACAAGAAT
GTCCTCCCCCCCCCTATCTGTATCACCGACTTTCCTCACGAATATACTCT
TAAGCAAGCTATCCACATCCATCCATCTGAACATCTCGACCCAACTCCTC
CGCATGGCTAAAAATCTCATTATGGCACCCAGGGTACACATTAAGATCAA
TCATTTTCCGGTATCAGACTCGGGATCCGCGAGTACAATAGGGGCCAGCT
TAAACCAGACCAATCCCATTATCACCGACAGCTTTCTGGATGGAGATGTC
GTCATCTCCATGAACAATTTCAACGAAACCATCGACCGTTCTGCAATAGT
CGAAGTTACTTTTGAGG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002941KJC3_002941Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002941-T1KJC3_002941-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002941-T1.cdsKJC3_002941-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002941-T1.utr3p2KJC3_002941-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_002941-T1.utr3p1KJC3_002941-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002941-T1.exon5KJC3_002941-T1.exon5Aspergillus niger KJC3exon
KJC3_002941-T1.exon4KJC3_002941-T1.exon4Aspergillus niger KJC3exon
KJC3_002941-T1.exon3KJC3_002941-T1.exon3Aspergillus niger KJC3exon
KJC3_002941-T1.exon2KJC3_002941-T1.exon2Aspergillus niger KJC3exon
KJC3_002941-T1.exon1KJC3_002941-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002941-T1.utr5p2KJC3_002941-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_002941-T1.utr5p1KJC3_002941-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3999578..4001267 -
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