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KJC3_002943-T1, KJC3_002943-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002943-T1
Unique NameKJC3_002943-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:4041..5098-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002943-T1 ID=KJC3_002943-T1|Name=KJC3_002943-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1058bp|location=Sequence derived from alignment at ch3:4041..5098- (Aspergillus niger KJC3)
CCAACCCCTTCTACCCCCGAACCACCCCTCATCATGACAAGTTCCAGCGA
AAAGTCACTAGTCCGACCAGAATTTGCAATTATCGATGAGCTGATCCAAA
TTCCGGATGTCTCTCCCGCTGAGGCAGTCCAACGTCTTCTTCGGGTGCGC
GAGGTATTACATGAAGAGAGACAGGAATCCGAATCCCCGTCTAGCATCGA
TGGTAATCATGCATGGTATACCATAAGCAAACTTGTGGAAAAGGCAGAAA
CTACTCCAGCAGCACAGCAGTACAAACTCCTCGATTTCGTTGCTCTGCTA
CAACGCACCAAGGTTATCGATCCTGCCACGGGCGAGCAGCCAACAGCGGT
TGATCTCAAACTATGGAATGAGCTTCCATATCTCAGTATATACTTAGCCG
ACTTTTATTATTTTGATTTTAAATCTAGTAAGTCACGTCTTCTCACCTCA
TCTATCTTGTCAGTTAATTCCATGGCTAACTCCTAACTCTGTCAGAATAT
GCCCGGCAGATAGATGAGGATCCCCAAAGGGAGTATCCTCCAAGAGACCT
CCAGAAGTGGGAGAACCGAAATGCCTTTATGGCGCAGCTTACCGCGAGGG
CAAATGACTTCTGCGAGTATATGGACGCATCTTTATATGCTTTCTACTCA
TGCCGATCAGCATTTGAGCAAGGGCCGCTGATAGAGGAGGCCGTACGCAC
TGCATGTATTTGGTATATTTATGCCGGTCAGCGCGTATGGGAGAACTGTC
AGGCTCAGCGTCATTTTGGGGATGATGATGATCCACCTCCGCGTCGATGC
ATGACCATGGAGAAATGGAGCCTCTGGAAAGACAGACTGAAGACAGCACA
GCTGGAGTTCCCTAGAGAAAGTACGCAGGAGATGATACGGAAGGCGTTGG
AAGAGATTGAAAAAGCAGAACACGGGGAGTGATAACAGAGAGAAGAGACT
TATTCACCACGGGAGTTCCAGTAGAGAAATCTTTACAACAGGACAACAGT
CAAATAATGTCTGATAAGTTCAGAATTAGTATTATTTGATAGTACTTTAT
ACACGGCA
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Coding sequence (CDS) from alignment at ch3:4041..5098-

>KJC3_002943-T1 ID=KJC3_002943-T1|Name=KJC3_002943-T1|organism=Aspergillus niger KJC3|type=CDS|length=1662bp|location=Sequence derived from alignment at ch3:4041..5098- (Aspergillus niger KJC3)
AATATGCCCGGCAGATAGATGAGGATCCCCAAAGGGAGTATCCTCCAAGA
GACCTCCAGAAGTGGGAGAACCGAAATGCCTTTATGGCGCAGCTTACCGC
GAGGGCAAATGACTTCTGCGAGTATATGGACGCATCTTTATATGCTTTCT
ACTCATGCCGATCAGCATTTGAGCAAGGGCCGCTGATAGAGGAGGCCGTA
CGCACTGCATGTATTTGGTATATTTATGCCGGTCAGCGCGTATGGGAGAA
CTGTCAGGCTCAGCGTCATTTTGGGGATGATGATGATCCACCTCCGCGTC
GATGCATGACCATGGAGAAATGGAGCCTCTGGAAAGACAGACTGAAGACA
GCACAGCTGGAGTTCCCTAGAGAAAGTACGCAGGAGATGATACGGAAGGC
GTTGGAAGAGATTGAAAAAGCAGAACACGGGGAGTGAATGACAAGTTCCA
GCGAAAAGTCACTAGTCCGACCAGAATTTGCAATTATCGATGAGCTGATC
CAAATTCCGGATGTCTCTCCCGCTGAGGCAGTCCAACGTCTTCTTCGGGT
GCGCGAGGTATTACATGAAGAGAGACAGGAATCCGAATCCCCGTCTAGCA
TCGATGGTAATCATGCATGGTATACCATAAGCAAACTTGTGGAAAAGGCA
GAAACTACTCCAGCAGCACAGCAGTACAAACTCCTCGATTTCGTTGCTCT
GCTACAACGCACCAAGGTTATCGATCCTGCCACGGGCGAGCAGCCAACAG
CGGTTGATCTCAAACTATGGAATGAGCTTCCATATCTCAGTATATACTTA
GCCGACTTTTATTATTTTGATTTTAAATCTAAATATGCCCGGCAGATAGA
TGAGGATCCCCAAAGGGAGTATCCTCCAAGAGACCTCCAGAAGTGGGAGA
ACCGAAATGCCTTTATGGCGCAGCTTACCGCGAGGGCAAATGACTTCTGC
GAGTATATGGACGCATCTTTATATGCTTTCTACTCATGCCGATCAGCATT
TGAGCAAGGGCCGCTGATAGAGGAGGCCGTACGCACTGCATGTATTTGGT
ATATTTATGCCGGTCAGCGCGTATGGGAGAACTGTCAGGCTCAGCGTCAT
TTTGGGGATGATGATGATCCACCTCCGCGTCGATGCATGACCATGGAGAA
ATGGAGCCTCTGGAAAGACAGACTGAAGACAGCACAGCTGGAGTTCCCTA
GAGAAAGTACGCAGGAGATGATACGGAAGGCGTTGGAAGAGATTGAAAAA
GCAGAACACGGGGAGTGAATGACAAGTTCCAGCGAAAAGTCACTAGTCCG
ACCAGAATTTGCAATTATCGATGAGCTGATCCAAATTCCGGATGTCTCTC
CCGCTGAGGCAGTCCAACGTCTTCTTCGGGTGCGCGAGGTATTACATGAA
GAGAGACAGGAATCCGAATCCCCGTCTAGCATCGATGGTAATCATGCATG
GTATACCATAAGCAAACTTGTGGAAAAGGCAGAAACTACTCCAGCAGCAC
AGCAGTACAAACTCCTCGATTTCGTTGCTCTGCTACAACGCACCAAGGTT
ATCGATCCTGCCACGGGCGAGCAGCCAACAGCGGTTGATCTCAAACTATG
GAATGAGCTTCCATATCTCAGTATATACTTAGCCGACTTTTATTATTTTG
ATTTTAAATCTA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002943KJC3_002943Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002943-T1KJC3_002943-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002943-T1.cdsKJC3_002943-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002943-T1.utr3p1KJC3_002943-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002943-T1.exon2KJC3_002943-T1.exon2Aspergillus niger KJC3exon
KJC3_002943-T1.exon1KJC3_002943-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002943-T1.utr5p1KJC3_002943-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR022085
DBxrefPFAM:PF12311
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:4041..5098 -
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