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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:33826..34915- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002949-T1 ID=KJC3_002949-T1|Name=KJC3_002949-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1090bp|location=Sequence derived from alignment at ch3:33826..34915- (Aspergillus niger KJC3)
TGTCGAACGAGGCTTTGCGACACTTTGTCTCGTCCCAGTGAGAGAGATCG
GTCCCCGCCAATTAAATCTGGCTCGGGTTATTGCCCTTCATTGCTCTCCT
GACGTCTCTAATCCTCACCCTCGCGTGCCACTTTCGTCAACTTCTTCCTT
CCCAATTTCATTCTTACGAGGCTTGGTCTTGCTGTGCTTCTCTCTTGAGC
CTCGCTCTCTTTTTAGTATTGGTCCCAGACTATTTCGACACCTTCCCCTT
GGCTAATCTGGCTTATTCTCAGTCTAGCCAAACGAAATCGAATTCTTACA
GCGGAAGAGTTCTGGTATATTTACACGACGGATTGTAAGTTCCAAGACAC
ACACGGAAACAATATCCTGCGTATTTCTATAATCCCTACCAAAGAAAATC
AAATAATGTCCAAGATGAAATTCAGACATCTGATTCCATTTGCCTCCTTT
GCAGTCAGTTGTATTGCGGCCATGTCTACTCCAGAGCCACTTCCAAACCC
CCAGCGTGTCATCACCGACACCGATCCCGAGACCGGCATCTCTCACTTCA
ATACGACCCTGGATGAAAGCCTTGCGGTCAAGCAGGATCTTGGAGGTTCC
TTGTTCCGTTTGGGATACATCACCGACAAGACCCCCAACACGCTCGATGG
CACCGATCTCACGAACTACATTGAGTACCTGGAGACTGCCAGCGTTCCTC
CCGTCACCCTCCCCGACGGTCGTGGCATGATGTGGTACATCGATACCCCT
CCTGGTAAAGGCAGTCCTGCTCACCGCACCGTCAGCTTTGACGTTGTTAT
CCAGGTCGCAGGCGAGATCGAAGTGACGCTCGAATCAGGCGAGAAGCGTA
TCCAGAAGCCGGGTGACATGCTCATCCAGCGCGCTACCACTCACACTTGG
AGAAACCTCAGCAAGGACAAGTGGGCCCGTATGGTTGGTGTTATGTACTC
GAGCAACCCTGTGGTTCTCAAAAATGGCACCGTACTTGGTCCTTCTGGAC
TCTAGTCGTCTCATCAACAATGGTATAGGCTATTTGTGTCTACATAGGAC
ACCCAATCTATTTTCAGGCAAATATTCTTTTTTTTCACGT back to topCoding sequence (CDS) from alignment at ch3:33826..34915- >KJC3_002949-T1 ID=KJC3_002949-T1|Name=KJC3_002949-T1|organism=Aspergillus niger KJC3|type=CDS|length=534bp|location=Sequence derived from alignment at ch3:33826..34915- (Aspergillus niger KJC3)
ATGTCTACTCCAGAGCCACTTCCAAACCCCCAGCGTGTCATCACCGACAC
CGATCCCGAGACCGGCATCTCTCACTTCAATACGACCCTGGATGAAAGCC
TTGCGGTCAAGCAGGATCTTGGAGGTTCCTTGTTCCGTTTGGGATACATC
ACCGACAAGACCCCCAACACGCTCGATGGCACCGATCTCACGAACTACAT
TGAGTACCTGGAGACTGCCAGCGTTCCTCCCGTCACCCTCCCCGACGGTC
GTGGCATGATGTGGTACATCGATACCCCTCCTGGTAAAGGCAGTCCTGCT
CACCGCACCGTCAGCTTTGACGTTGTTATCCAGGTCGCAGGCGAGATCGA
AGTGACGCTCGAATCAGGCGAGAAGCGTATCCAGAAGCCGGGTGACATGC
TCATCCAGCGCGCTACCACTCACACTTGGAGAAACCTCAGCAAGGACAAG
TGGGCCCGTATGGTTGGTGTTATGTACTCGAGCAACCCTGTGGTTCTCAA
AAATGGCACCGTACTTGGTCCTTCTGGACTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002949-T1.utr3p1 | KJC3_002949-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.1 |
| DBxref | InterPro:IPR011051 |
| DBxref | InterPro:IPR014710 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:33826..34915 - |
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