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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:64231..65584+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002962-T1 ID=KJC3_002962-T1|Name=KJC3_002962-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1354bp|location=Sequence derived from alignment at ch3:64231..65584+ (Aspergillus niger KJC3)
TGAAACAGTCAACACAGCTCGCCCATCGTATTCATGCGGAAGCATGTATA
GGCCAACGACCAAGTATGAATGGTGGCTATGCGGCGTGTTGCTGACACAG
GCAGCTTTAACCATCATCTCCGAGGTGTACGCCCTTCCACTTCTGCAGAT
CCGAGCACACCTAACCAAGGAAAAACAGCTATATACTTATTGAATGGCAG
CAATGGGTTACCCCAACAATCAATCAAGTGCCGGTGTCCTACTTGATACC
GATTAACCTAGGCATTTTGATTTTCGCGTGCTTGTTCGAGTTCATTCTAT
CCTTGGATGCAATGCATCACAAGAATAACATTCTTCTGTTTGCAGTCTGC
ATCTGTAATGCGTGCAGTTTCGGCTATTCTGTGATGCAATTTATCGTGAT
GAGAGATACCACTGCGAGACTGTTCAAGACACGATTTGGGTATCCGACTT
TGGTGGATACTACACGCAATGTCTGGCCTCGGGTTCAGCCAGCAGAGATC
CTTGTATGTATCTTTACAGGGTTCTCCGCTCTGATTCTATGCCCAATTGC
ATATTTAATCCATAGGCATTATTCATGGGCCATCTACAAGTCTGTTCACG
GCAGCTTGGATACTCGAATGCGTTACCTGGCTTATGAGGTAACATTGACC
CTTTCGTGTTCCACTCCCCATAAAGTATCCTGGAGGTCCTGCTAACGATA
GGTGAGCTCAGATTTTCCTCGTACTAATAAAGCTCGACTTCTATTTTCTG
ATTGGTTTCATCATACAATACGACTTGGTATATGTGCATTTTAAGGAACC
AGAATATACTCTTACAATGCTTATCATTCCCGCTGCCATCATTGCGATAT
TCCTTGGTGTCTGGTTTGTCCAGCGCGAACGAACCATTGGTGCGGTTGCT
ATCATTGTGAGCTTCTCTGCCTCTAATATGGTCCCATCGAGTTACTCCAT
CGCCTTCTAATCACTATATGACAGATGTGCTACCTTGCCTTAATCGCGTA
TCTTATTAGCCGGATTGTCATTCTCTGTTCGGCAAACACAGCTGGGAAGA
GTATGATGCTGTTCTTTGCATCTTTGACCTTGGTCCTGACTGCCGGAACG
GTTCTTTGCACTGCAATTTGCATCAAAAACTTCAATCGGGGTTTGACGAC
CATTAACCAGTCGAAGAATGCCAATGCTCGGGAATCCTACCTCTTATATA
ATAGGAGCCCCTCCGCGGAGCTGTCTCCTGGTTTTCCGCGTTCTTCCTCG
CGTCTCACACTTGATTAAAGCAGGCAACGAGACCGCAAATGTGACTATAC
ACTAAAGCTTTTGTGTAATTTGACTATATACAGCCGTCTGGCGTGCAAGC
AAGA back to topCoding sequence (CDS) from alignment at ch3:64231..65584+ >KJC3_002962-T1 ID=KJC3_002962-T1|Name=KJC3_002962-T1|organism=Aspergillus niger KJC3|type=CDS|length=4128bp|location=Sequence derived from alignment at ch3:64231..65584+ (Aspergillus niger KJC3)
ATGTATAGGCCAACGACCAAGTATGAATGGTGGCTATGCGGCGTGTTGCT
GACACAGGCAGCTTTAACCATCATCTCCGAGGTCTATATACTTATTGAAT
GGCAGCAATGGGTTACCCCAACAATCAATCAAGTGCCGGTGTCCTACTTG
ATACCGATTAACCTAGGCATTTTGATTTTCGCGTGCTTGTTCGAGTTCAT
TCTATCCTTGGATGCAATGCATCACAAGAATAACATTCTTCTGTTTGCAG
TCTGCATCTGTAATGCGTGCAGTTTCGGCTATTCTGTGATGCAATTTATC
GTGATGAGAGATACCACTGCGAGACTGTTCAAGACACGATTTGGGTATCC
GACTTTGGTGGATACTACACGCAATGTCTGGCCTCGGGTTCAGCCAGCAG
AGATCCTTGTATGTATCTTTACAGGGTTCTCCGCTCTGATTCTATGCCCA
ATTGCATATTTAATCCATAGGCATTATTCATGGGCCATCTACAAGTCTGT
TCACGGCAGCTTGGATACTCGAATGCGTTACCTGGCTTATGAGATTTTCC
TCGTACTAATAAAGCTCGACTTCTATTTTCTGATTGGTTTCATCATACAA
TACGACTTGGTATATGTGCATTTTAAGGAACCAGAATATACTCTTACAAT
GCTTATCATTCCCGCTGCCATCATTGCGATATTCCTTGGTGTCTGGTTTG
TCCAGCGCGAACGAACCATTGGTGCGGTTGCTATCATTATGTGCTACCTT
GCCTTAATCGCGTATCTTATTAGCCGGATTGTCATTCTCTGTTCGGCAAA
CACAGCTGGGAAGAGTATGATGCTGTTCTTTGCATCTTTGACCTTGGTCC
TGACTGCCGGAACGGTTCTTTGCACTGCAATTTGCATCAAAAACTTCAAT
CGGGGTTTGACGACCATTAACCAGTCGAAGAATGCCAATGCTCGGGAATC
CTACCTCTTATATAATAGGAGCCCCTCCGCGGAGCTGTCTCCTGGTTTTC
CGCGTTCTTCCTCGCGTCTCACACTTGATTAAATGTATAGGCCAACGACC
AAGTATGAATGGTGGCTATGCGGCGTGTTGCTGACACAGGCAGCTTTAAC
CATCATCTCCGAGGTCTATATACTTATTGAATGGCAGCAATGGGTTACCC
CAACAATCAATCAAGTGCCGGTGTCCTACTTGATACCGATTAACCTAGGC
ATTTTGATTTTCGCGTGCTTGTTCGAGTTCATTCTATCCTTGGATGCAAT
GCATCACAAGAATAACATTCTTCTGTTTGCAGTCTGCATCTGTAATGCGT
GCAGTTTCGGCTATTCTGTGATGCAATTTATCGTGATGAGAGATACCACT
GCGAGACTGTTCAAGACACGATTTGGGTATCCGACTTTGGTGGATACTAC
ACGCAATGTCTGGCCTCGGGTTCAGCCAGCAGAGATCCTTGTATGTATCT
TTACAGGGTTCTCCGCTCTGATTCTATGCCCAATTGCATATTTAATCCAT
AGGCATTATTCATGGGCCATCTACAAGTCTGTTCACGGCAGCTTGGATAC
TCGAATGCGTTACCTGGCTTATGAGATTTTCCTCGTACTAATAAAGCTCG
ACTTCTATTTTCTGATTGGTTTCATCATACAATACGACTTGGTATATGTG
CATTTTAAGGAACCAGAATATACTCTTACAATGCTTATCATTCCCGCTGC
CATCATTGCGATATTCCTTGGTGTCTGGTTTGTCCAGCGCGAACGAACCA
TTGGTGCGGTTGCTATCATTATGTGCTACCTTGCCTTAATCGCGTATCTT
ATTAGCCGGATTGTCATTCTCTGTTCGGCAAACACAGCTGGGAAGAGTAT
GATGCTGTTCTTTGCATCTTTGACCTTGGTCCTGACTGCCGGAACGGTTC
TTTGCACTGCAATTTGCATCAAAAACTTCAATCGGGGTTTGACGACCATT
AACCAGTCGAAGAATGCCAATGCTCGGGAATCCTACCTCTTATATAATAG
GAGCCCCTCCGCGGAGCTGTCTCCTGGTTTTCCGCGTTCTTCCTCGCGTC
TCACACTTGATTAAATGTATAGGCCAACGACCAAGTATGAATGGTGGCTA
TGCGGCGTGTTGCTGACACAGGCAGCTTTAACCATCATCTCCGAGGTCTA
TATACTTATTGAATGGCAGCAATGGGTTACCCCAACAATCAATCAAGTGC
CGGTGTCCTACTTGATACCGATTAACCTAGGCATTTTGATTTTCGCGTGC
TTGTTCGAGTTCATTCTATCCTTGGATGCAATGCATCACAAGAATAACAT
TCTTCTGTTTGCAGTCTGCATCTGTAATGCGTGCAGTTTCGGCTATTCTG
TGATGCAATTTATCGTGATGAGAGATACCACTGCGAGACTGTTCAAGACA
CGATTTGGGTATCCGACTTTGGTGGATACTACACGCAATGTCTGGCCTCG
GGTTCAGCCAGCAGAGATCCTTGTATGTATCTTTACAGGGTTCTCCGCTC
TGATTCTATGCCCAATTGCATATTTAATCCATAGGCATTATTCATGGGCC
ATCTACAAGTCTGTTCACGGCAGCTTGGATACTCGAATGCGTTACCTGGC
TTATGAGATTTTCCTCGTACTAATAAAGCTCGACTTCTATTTTCTGATTG
GTTTCATCATACAATACGACTTGGTATATGTGCATTTTAAGGAACCAGAA
TATACTCTTACAATGCTTATCATTCCCGCTGCCATCATTGCGATATTCCT
TGGTGTCTGGTTTGTCCAGCGCGAACGAACCATTGGTGCGGTTGCTATCA
TTATGTGCTACCTTGCCTTAATCGCGTATCTTATTAGCCGGATTGTCATT
CTCTGTTCGGCAAACACAGCTGGGAAGAGTATGATGCTGTTCTTTGCATC
TTTGACCTTGGTCCTGACTGCCGGAACGGTTCTTTGCACTGCAATTTGCA
TCAAAAACTTCAATCGGGGTTTGACGACCATTAACCAGTCGAAGAATGCC
AATGCTCGGGAATCCTACCTCTTATATAATAGGAGCCCCTCCGCGGAGCT
GTCTCCTGGTTTTCCGCGTTCTTCCTCGCGTCTCACACTTGATTAAATGT
ATAGGCCAACGACCAAGTATGAATGGTGGCTATGCGGCGTGTTGCTGACA
CAGGCAGCTTTAACCATCATCTCCGAGGTCTATATACTTATTGAATGGCA
GCAATGGGTTACCCCAACAATCAATCAAGTGCCGGTGTCCTACTTGATAC
CGATTAACCTAGGCATTTTGATTTTCGCGTGCTTGTTCGAGTTCATTCTA
TCCTTGGATGCAATGCATCACAAGAATAACATTCTTCTGTTTGCAGTCTG
CATCTGTAATGCGTGCAGTTTCGGCTATTCTGTGATGCAATTTATCGTGA
TGAGAGATACCACTGCGAGACTGTTCAAGACACGATTTGGGTATCCGACT
TTGGTGGATACTACACGCAATGTCTGGCCTCGGGTTCAGCCAGCAGAGAT
CCTTGTATGTATCTTTACAGGGTTCTCCGCTCTGATTCTATGCCCAATTG
CATATTTAATCCATAGGCATTATTCATGGGCCATCTACAAGTCTGTTCAC
GGCAGCTTGGATACTCGAATGCGTTACCTGGCTTATGAGATTTTCCTCGT
ACTAATAAAGCTCGACTTCTATTTTCTGATTGGTTTCATCATACAATACG
ACTTGGTATATGTGCATTTTAAGGAACCAGAATATACTCTTACAATGCTT
ATCATTCCCGCTGCCATCATTGCGATATTCCTTGGTGTCTGGTTTGTCCA
GCGCGAACGAACCATTGGTGCGGTTGCTATCATTATGTGCTACCTTGCCT
TAATCGCGTATCTTATTAGCCGGATTGTCATTCTCTGTTCGGCAAACACA
GCTGGGAAGAGTATGATGCTGTTCTTTGCATCTTTGACCTTGGTCCTGAC
TGCCGGAACGGTTCTTTGCACTGCAATTTGCATCAAAAACTTCAATCGGG
GTTTGACGACCATTAACCAGTCGAAGAATGCCAATGCTCGGGAATCCTAC
CTCTTATATAATAGGAGCCCCTCCGCGGAGCTGTCTCCTGGTTTTCCGCG
TTCTTCCTCGCGTCTCACACTTGATTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002962-T1.utr5p1 | KJC3_002962-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002962-T1.utr3p1 | KJC3_002962-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.2 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:64231..65584 + |
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