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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:77175..78120+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002967-T1 ID=KJC3_002967-T1|Name=KJC3_002967-T1|organism=Aspergillus niger KJC3|type=mRNA|length=946bp|location=Sequence derived from alignment at ch3:77175..78120+ (Aspergillus niger KJC3)
CATATGTTCAGGCTGTATCTGGCTGGGTATATTGTAAACCTCTGACGAAC
TGGGTCAATCTTTCTCGCAAGACTAACAATCGCATCCGAGCCACACATGG
AGCTGCAACGATGAGGCTTTCGGACGCGGCATCCCGTACGCCCGCTCGAG
TCGCCATATAAAGGCCATGCCGAATCCTGGATCACTGCTCGTCATCGCCA
GTGACTCAACTGTGTCAGAATCCCTTGTGGCTAATATTTCATGTATACCA
TCACAACCAGCGTGGAGATCGCAGCCCCTCCCGGGGTGGTACGAGACAAG
GTGCAGCCCATCCCGGCACCCCCAAATGTGCCCGAGCAAACTGACCTCGT
CCTCGAAACAGTTCCTGGATTTCGCAGCTTTGCCCACTTACTCTCCATCT
GGCTTTATTCGACACATCTCTTCTGTCACTGACAAGCCCCCCACGCATCT
CCAAGCCGGGGACCGATTGAACTGTACAGTCAACTACGGCAAGACGCATT
TCACGCCCATCGTCCAAGCCAATACCCCGGCCCTCTTCAGCTGGGTGGGC
TCAATTCCGGGAATTTTCACCGGCGAACACCGCTTCAACTTTGAATCTAT
TGACGCAGATCAGCCTGGCAAACCGTACCGGACGCGCCTCGTCCACGAAG
AGCGATTCACTGGACTGCTCAGTTTTCTCATGGGTCAAGGAATGCTAGCC
AACGCAGCGGGGTGGAGAGAGAACACCCGCCAGGGGTTCGACACGTTCAA
CCGAGATTTCAAAGCTTGGGTGGAGGCCTCCAGGAGATGATTCATAGACA
CAATCTGTGGCCGAACAGGGGAGGAGCGTCATGTTGTGCCTTGTAGGGGC
GACCAGAATCATGCCCTACTTAGTAATCTCCGCAAGATTAAGTTATTAAC
GTAATCAACGGTTGGGCGGCCCATCTCGTTATCCCATATAAACGAT back to topCoding sequence (CDS) from alignment at ch3:77175..78120+ >KJC3_002967-T1 ID=KJC3_002967-T1|Name=KJC3_002967-T1|organism=Aspergillus niger KJC3|type=CDS|length=978bp|location=Sequence derived from alignment at ch3:77175..78120+ (Aspergillus niger KJC3)
ATGTATACCATCACAACCAGCGTGGAGATCGCAGCCCCTCCCGGGGTGGT
ACGAGACAAGTTCCTGGATTTCGCAGCTTTGCCCACTTACTCTCCATCTG
GCTTTATTCGACACATCTCTTCTGTCACTGACAAGCCCCCCACGCATCTC
CAAGCCGGGGACCGATTGAACTGTACAGTCAACTACGGCAAGACGCATTT
CACGCCCATCGTCCAAGCCAATACCCCGGCCCTCTTCAGCTGGGTGGGCT
CAATTCCGGGAATTTTCACCGGCGAACACCGCTTCAACTTTGAATCTATT
GACGCAGATCAGCCTGGCAAACCGTACCGGACGCGCCTCGTCCACGAAGA
GCGATTCACTGGACTGCTCAGTTTTCTCATGGGTCAAGGAATGCTAGCCA
ACGCAGCGGGGTGGAGAGAGAACACCCGCCAGGGGTTCGACACGTTCAAC
CGAGATTTCAAAGCTTGGGTGGAGGCCTCCAGGAGATGAATGTATACCAT
CACAACCAGCGTGGAGATCGCAGCCCCTCCCGGGGTGGTACGAGACAAGT
TCCTGGATTTCGCAGCTTTGCCCACTTACTCTCCATCTGGCTTTATTCGA
CACATCTCTTCTGTCACTGACAAGCCCCCCACGCATCTCCAAGCCGGGGA
CCGATTGAACTGTACAGTCAACTACGGCAAGACGCATTTCACGCCCATCG
TCCAAGCCAATACCCCGGCCCTCTTCAGCTGGGTGGGCTCAATTCCGGGA
ATTTTCACCGGCGAACACCGCTTCAACTTTGAATCTATTGACGCAGATCA
GCCTGGCAAACCGTACCGGACGCGCCTCGTCCACGAAGAGCGATTCACTG
GACTGCTCAGTTTTCTCATGGGTCAAGGAATGCTAGCCAACGCAGCGGGG
TGGAGAGAGAACACCCGCCAGGGGTTCGACACGTTCAACCGAGATTTCAA
AGCTTGGGTGGAGGCCTCCAGGAGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002967-T1.utr3p1 | KJC3_002967-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.2 |
| DBxref | InterPro:IPR023393 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:77175..78120 + |
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