You are here

Home

KJC3_003004-T1, KJC3_003004-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003004-T1
Unique NameKJC3_003004-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:173918..174988-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003004-T1 ID=KJC3_003004-T1|Name=KJC3_003004-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1071bp|location=Sequence derived from alignment at ch3:173918..174988- (Aspergillus niger KJC3)
ATGGCTATCTTCAACGCATCTGACGTCAACCTTCACACGGCCAGCAAAGA
GGATGTGCTGTGCTACTATGCCATCTCTGAAAATGACTACAACGGTCATA
TGGGAGCCCGCATCTCCTCCATCTTCGTCATCCTCTTCGTCTCCACAGCC
TTCACTTTCTTCCCCGTTGTGGCTAAGAGCATGCCCCGCTGGAAGATTCC
TCACAACGTCTACATCTTCGCCCGCTACTTTGGTACGGGTGTCATCCTAG
CGACAGCCTTTATTCATCTGCTAGATCCGGCGTATAAGCGCATCGGACCC
AAGACCTGCGTTGGCGTTTCCGGCAATTGGTCCATATACTCCTGGTGTGC
GGGCATTGTCCTTGCTTCCATCACTCTGATCTTCCTTCTCGATCTCGCGG
CTGAGGTATACGTGGAAAACAAGTACGGCATGCACCGCGAGGAGAATGCC
ACGGATGCCTTTATTGCCGGTGATCCGACCAGCGCGCATGTTCACCCCAA
CCCCGAAGATGGTCGCATGTCGGCAGAGAAGACCTCCCCCACCGCAACCT
CTGCAGAAACCTCGTCGGAACAAAGCGAACGCTCCTTCAGGCAACAGATT
GCCGGTTTCTTGATCCTCGAGTTCGGTATCATCTTCCACTCGGTCATCAT
CGGGCTCAATCTTGGTGTGACCGGTTCCGAATTCGCGACCCTCTACCCCG
TGTTGGTCTTCCACCAGTCCTTCGAGGGCCTGGGTATCGGTGCCAGACTC
TCAGCCATCCCCTTCGGACATCGCAAGTGGCTCCCTCACCTGCTGTGTCT
GGCATATGGTCTGACCACTCCAATCTCGATCGCGATCGGCCTGGGACTGC
GCACCGCCTATAATCCGGGCTCGAAGACATCCTTAATCGTGCAGGGAGTG
TTCAATGCCATCTCAGCAGGAGTGCTGATCTACAGCGCCCTGGTGGAACT
GCTGGCCCGCGACTTCATCTTCGACCCGTGCCGCACTCGTCGTCGCTCGA
AGTTGCTGTACATGGTTTTCTGCACGTTGTTGGGGGCGGGCATCATGGCT
TTGATTGGAAAGTGGGCGTAA
back to top

Coding sequence (CDS) from alignment at ch3:173918..174988-

>KJC3_003004-T1 ID=KJC3_003004-T1|Name=KJC3_003004-T1|organism=Aspergillus niger KJC3|type=CDS|length=1071bp|location=Sequence derived from alignment at ch3:173918..174988- (Aspergillus niger KJC3)
ATGGCTATCTTCAACGCATCTGACGTCAACCTTCACACGGCCAGCAAAGA
GGATGTGCTGTGCTACTATGCCATCTCTGAAAATGACTACAACGGTCATA
TGGGAGCCCGCATCTCCTCCATCTTCGTCATCCTCTTCGTCTCCACAGCC
TTCACTTTCTTCCCCGTTGTGGCTAAGAGCATGCCCCGCTGGAAGATTCC
TCACAACGTCTACATCTTCGCCCGCTACTTTGGTACGGGTGTCATCCTAG
CGACAGCCTTTATTCATCTGCTAGATCCGGCGTATAAGCGCATCGGACCC
AAGACCTGCGTTGGCGTTTCCGGCAATTGGTCCATATACTCCTGGTGTGC
GGGCATTGTCCTTGCTTCCATCACTCTGATCTTCCTTCTCGATCTCGCGG
CTGAGGTATACGTGGAAAACAAGTACGGCATGCACCGCGAGGAGAATGCC
ACGGATGCCTTTATTGCCGGTGATCCGACCAGCGCGCATGTTCACCCCAA
CCCCGAAGATGGTCGCATGTCGGCAGAGAAGACCTCCCCCACCGCAACCT
CTGCAGAAACCTCGTCGGAACAAAGCGAACGCTCCTTCAGGCAACAGATT
GCCGGTTTCTTGATCCTCGAGTTCGGTATCATCTTCCACTCGGTCATCAT
CGGGCTCAATCTTGGTGTGACCGGTTCCGAATTCGCGACCCTCTACCCCG
TGTTGGTCTTCCACCAGTCCTTCGAGGGCCTGGGTATCGGTGCCAGACTC
TCAGCCATCCCCTTCGGACATCGCAAGTGGCTCCCTCACCTGCTGTGTCT
GGCATATGGTCTGACCACTCCAATCTCGATCGCGATCGGCCTGGGACTGC
GCACCGCCTATAATCCGGGCTCGAAGACATCCTTAATCGTGCAGGGAGTG
TTCAATGCCATCTCAGCAGGAGTGCTGATCTACAGCGCCCTGGTGGAACT
GCTGGCCCGCGACTTCATCTTCGACCCGTGCCGCACTCGTCGTCGCTCGA
AGTTGCTGTACATGGTTTTCTGCACGTTGTTGGGGGCGGGCATCATGGCT
TTGATTGGAAAGTGGGCGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0046873metal ion transmembrane transporter activity
GO:0005385zinc ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0030001metal ion transport
GO:0071577zinc ion transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003004KJC3_003004Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003004-T1.cdsKJC3_003004-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003004-T1.exon1KJC3_003004-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003004-T1KJC3_003004-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003689
DBxrefInterPro:IPR004698
DBxrefPFAM:PF02535
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:173918..174988 -
Powered by Drupal