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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:179230..180810- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003007-T1 ID=KJC3_003007-T1|Name=KJC3_003007-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1581bp|location=Sequence derived from alignment at ch3:179230..180810- (Aspergillus niger KJC3)
ATGACCCAGCTCGTGGCCGTTTTCGTATTGACAGCATCTGCATTGTCCAT
GAGTCCCATGTTCCCTGCCTTTTCCGAATCCTTCGATTTGAACAACACTC
AACTCCTGCTCATCACCGGCGTGTGTATCCTGTCCTTTGCCTATGCCAAC
TTGATCGTCGTTCCCTGTTCCAATATCTTCGGTCGTCGCCTTACTTTCCT
CGTCTTTTTGTCGATCAGCTTCGCCTCATATATATGGGAGGCTCTCGCCT
CGTCTTATACCAGCTTTATCGTGGCCCGAGTGGTGAATGGAGCAGGGGCT
GCGGCCTGTGAGACAATACCCATGCAGACTGTTGCGGATATTTTCTTCTT
ATACGAGCGAGGACGATGGACTGTAGCTTATTTGTCAGTGGGACTATCGA
GAAACACATCAAGGCTGTTTTACTGACCAATCGACTCAGTACCGCGGCCT
CTTTTGGCTCTTTCCTGGGGCCAGTAATCTCAGGTAATATCACGCAAAGG
TATGACCATGTCATTAACTATCTCATACGATAAACTTGCGCTGAGTTCGA
GTGGCCGACTGACTGACCTATGGAGTACCAGATTCGGATGGCGTAGCTTC
TTCTGGCTATCAATGGCCATGACCTGCTTCAACTTCATCACTATCCTCTT
CTGCTCCCCAGAGACGAAGTATCACCGTGACCATACGCCTAACCCACTGC
GACATACGCCACATGCGTCTCCGACCCCAGAAGCCATGGAATCCCCCACA
GACGTCAGTCCGACCGTAGATTCGAAGGAAATCTACTCAACCCAACCACT
ACCGCCGAAGCCCGGGACTGGATCCCCCTCTAGCGCCCAATTCAAAATAT
GGCGAATCCCTGACATGCGATGGAAAGCCTTCCTCCTGCGAGACCTCCTC
ACCCCATTCCGCATATGCCTCTACCCCATCATTTTCTGGGCTGCGGTGAC
AGTTTCCGGCGTCGCGAACTTCGTTCTCTTCTGGAACCTCACTGAATCCT
CCGTCCTCGGGGCTTCTCCCTACAATTTCAATGCGTCCAAAGTGGGATAC
TCCAACTTCGCCTTTCTAATCGGTTGCATAGTCGGGCTTGTCACGGCGGG
GCCATTATCTGACTGGGTCGCGGTGAAAGCCACGCAGCGGAACAAGGGTG
TCTACGAGGCGGAAATGAGACTCTTGGCTCTTATCCCTCCCGCTGGAATA
CTGCTTCTGTCCGTGTTGGTTGGCGCATTTGCTATCCATGATTTATGGCC
CTGGCCTGTTCTTTTGATATTTGGGTATGGACTCAGTGGCCTGGTTGTCT
CGGCAATGTCTAGCATTGCAGTGGCGTATGCGATGGATTCGTATAAACCT
GTCTCTGGAGAAATAATGGCCGTGGTCACAATTGTGAGGAATACTTGTGG
GTTTAGTATGAGTTATTGGGTGCCGTCATTGGCGGAGAGGAGGCTGGGGT
ATTTTTTGCCTGCTATGGTGCAGTTGGCTTTGACGTTTGGGCCGTTGGTG
TTGGGGGTGCCGATGTACTTTTTCGGGAAGAGGTTGCGGATGTGGACGAG
GAATTCGAGTGTACATCTGTATGGGGGTTAA back to topCoding sequence (CDS) from alignment at ch3:179230..180810- >KJC3_003007-T1 ID=KJC3_003007-T1|Name=KJC3_003007-T1|organism=Aspergillus niger KJC3|type=CDS|length=4329bp|location=Sequence derived from alignment at ch3:179230..180810- (Aspergillus niger KJC3)
ATTCGGATGGCGTAGCTTCTTCTGGCTATCAATGGCCATGACCTGCTTCA
ACTTCATCACTATCCTCTTCTGCTCCCCAGAGACGAAGTATCACCGTGAC
CATACGCCTAACCCACTGCGACATACGCCACATGCGTCTCCGACCCCAGA
AGCCATGGAATCCCCCACAGACGTCAGTCCGACCGTAGATTCGAAGGAAA
TCTACTCAACCCAACCACTACCGCCGAAGCCCGGGACTGGATCCCCCTCT
AGCGCCCAATTCAAAATATGGCGAATCCCTGACATGCGATGGAAAGCCTT
CCTCCTGCGAGACCTCCTCACCCCATTCCGCATATGCCTCTACCCCATCA
TTTTCTGGGCTGCGGTGACAGTTTCCGGCGTCGCGAACTTCGTTCTCTTC
TGGAACCTCACTGAATCCTCCGTCCTCGGGGCTTCTCCCTACAATTTCAA
TGCGTCCAAAGTGGGATACTCCAACTTCGCCTTTCTAATCGGTTGCATAG
TCGGGCTTGTCACGGCGGGGCCATTATCTGACTGGGTCGCGGTGAAAGCC
ACGCAGCGGAACAAGGGTGTCTACGAGGCGGAAATGAGACTCTTGGCTCT
TATCCCTCCCGCTGGAATACTGCTTCTGTCCGTGTTGGTTGGCGCATTTG
CTATCCATGATTTATGGCCCTGGCCTGTTCTTTTGATATTTGGGTATGGA
CTCAGTGGCCTGGTTGTCTCGGCAATGTCTAGCATTGCAGTGGCGTATGC
GATGGATTCGTATAAACCTGTCTCTGGAGAAATAATGGCCGTGGTCACAA
TTGTGAGGAATACTTGTGGGTTTAGTATGAGTTATTGGGTGCCGTCATTG
GCGGAGAGGAGGCTGGGGTATTTTTTGCCTGCTATGGTGCAGTTGGCTTT
GACGTTTGGGCCGTTGGTGTTGGGGGTGCCGATGTACTTTTTCGGGAAGA
GGTTGCGGATGTGGACGAGGAATTCGAGTGTACATCTGTATGGGGGTTAA
TACCGCGGCCTCTTTTGGCTCTTTCCTGGGGCCAGTAATCTCAGGTAATA
TCACGCAAAGATGACCCAGCTCGTGGCCGTTTTCGTATTGACAGCATCTG
CATTGTCCATGAGTCCCATGTTCCCTGCCTTTTCCGAATCCTTCGATTTG
AACAACACTCAACTCCTGCTCATCACCGGCGTGTGTATCCTGTCCTTTGC
CTATGCCAACTTGATCGTCGTTCCCTGTTCCAATATCTTCGGTCGTCGCC
TTACTTTCCTCGTCTTTTTGTCGATCAGCTTCGCCTCATATATATGGGAG
GCTCTCGCCTCGTCTTATACCAGCTTTATCGTGGCCCGAGTGGTGAATGG
AGCAGGGGCTGCGGCCTGTGAGACAATACCCATGCAGACTGTTGCGGATA
TTTTCTTCTTATACGAGCGAGGACGATGGACTGTAGCTTATTTATTCGGA
TGGCGTAGCTTCTTCTGGCTATCAATGGCCATGACCTGCTTCAACTTCAT
CACTATCCTCTTCTGCTCCCCAGAGACGAAGTATCACCGTGACCATACGC
CTAACCCACTGCGACATACGCCACATGCGTCTCCGACCCCAGAAGCCATG
GAATCCCCCACAGACGTCAGTCCGACCGTAGATTCGAAGGAAATCTACTC
AACCCAACCACTACCGCCGAAGCCCGGGACTGGATCCCCCTCTAGCGCCC
AATTCAAAATATGGCGAATCCCTGACATGCGATGGAAAGCCTTCCTCCTG
CGAGACCTCCTCACCCCATTCCGCATATGCCTCTACCCCATCATTTTCTG
GGCTGCGGTGACAGTTTCCGGCGTCGCGAACTTCGTTCTCTTCTGGAACC
TCACTGAATCCTCCGTCCTCGGGGCTTCTCCCTACAATTTCAATGCGTCC
AAAGTGGGATACTCCAACTTCGCCTTTCTAATCGGTTGCATAGTCGGGCT
TGTCACGGCGGGGCCATTATCTGACTGGGTCGCGGTGAAAGCCACGCAGC
GGAACAAGGGTGTCTACGAGGCGGAAATGAGACTCTTGGCTCTTATCCCT
CCCGCTGGAATACTGCTTCTGTCCGTGTTGGTTGGCGCATTTGCTATCCA
TGATTTATGGCCCTGGCCTGTTCTTTTGATATTTGGGTATGGACTCAGTG
GCCTGGTTGTCTCGGCAATGTCTAGCATTGCAGTGGCGTATGCGATGGAT
TCGTATAAACCTGTCTCTGGAGAAATAATGGCCGTGGTCACAATTGTGAG
GAATACTTGTGGGTTTAGTATGAGTTATTGGGTGCCGTCATTGGCGGAGA
GGAGGCTGGGGTATTTTTTGCCTGCTATGGTGCAGTTGGCTTTGACGTTT
GGGCCGTTGGTGTTGGGGGTGCCGATGTACTTTTTCGGGAAGAGGTTGCG
GATGTGGACGAGGAATTCGAGTGTACATCTGTATGGGGGTTAATACCGCG
GCCTCTTTTGGCTCTTTCCTGGGGCCAGTAATCTCAGGTAATATCACGCA
AAGATGACCCAGCTCGTGGCCGTTTTCGTATTGACAGCATCTGCATTGTC
CATGAGTCCCATGTTCCCTGCCTTTTCCGAATCCTTCGATTTGAACAACA
CTCAACTCCTGCTCATCACCGGCGTGTGTATCCTGTCCTTTGCCTATGCC
AACTTGATCGTCGTTCCCTGTTCCAATATCTTCGGTCGTCGCCTTACTTT
CCTCGTCTTTTTGTCGATCAGCTTCGCCTCATATATATGGGAGGCTCTCG
CCTCGTCTTATACCAGCTTTATCGTGGCCCGAGTGGTGAATGGAGCAGGG
GCTGCGGCCTGTGAGACAATACCCATGCAGACTGTTGCGGATATTTTCTT
CTTATACGAGCGAGGACGATGGACTGTAGCTTATTTATTCGGATGGCGTA
GCTTCTTCTGGCTATCAATGGCCATGACCTGCTTCAACTTCATCACTATC
CTCTTCTGCTCCCCAGAGACGAAGTATCACCGTGACCATACGCCTAACCC
ACTGCGACATACGCCACATGCGTCTCCGACCCCAGAAGCCATGGAATCCC
CCACAGACGTCAGTCCGACCGTAGATTCGAAGGAAATCTACTCAACCCAA
CCACTACCGCCGAAGCCCGGGACTGGATCCCCCTCTAGCGCCCAATTCAA
AATATGGCGAATCCCTGACATGCGATGGAAAGCCTTCCTCCTGCGAGACC
TCCTCACCCCATTCCGCATATGCCTCTACCCCATCATTTTCTGGGCTGCG
GTGACAGTTTCCGGCGTCGCGAACTTCGTTCTCTTCTGGAACCTCACTGA
ATCCTCCGTCCTCGGGGCTTCTCCCTACAATTTCAATGCGTCCAAAGTGG
GATACTCCAACTTCGCCTTTCTAATCGGTTGCATAGTCGGGCTTGTCACG
GCGGGGCCATTATCTGACTGGGTCGCGGTGAAAGCCACGCAGCGGAACAA
GGGTGTCTACGAGGCGGAAATGAGACTCTTGGCTCTTATCCCTCCCGCTG
GAATACTGCTTCTGTCCGTGTTGGTTGGCGCATTTGCTATCCATGATTTA
TGGCCCTGGCCTGTTCTTTTGATATTTGGGTATGGACTCAGTGGCCTGGT
TGTCTCGGCAATGTCTAGCATTGCAGTGGCGTATGCGATGGATTCGTATA
AACCTGTCTCTGGAGAAATAATGGCCGTGGTCACAATTGTGAGGAATACT
TGTGGGTTTAGTATGAGTTATTGGGTGCCGTCATTGGCGGAGAGGAGGCT
GGGGTATTTTTTGCCTGCTATGGTGCAGTTGGCTTTGACGTTTGGGCCGT
TGGTGTTGGGGGTGCCGATGTACTTTTTCGGGAAGAGGTTGCGGATGTGG
ACGAGGAATTCGAGTGTACATCTGTATGGGGGTTAATACCGCGGCCTCTT
TTGGCTCTTTCCTGGGGCCAGTAATCTCAGGTAATATCACGCAAAGATGA
CCCAGCTCGTGGCCGTTTTCGTATTGACAGCATCTGCATTGTCCATGAGT
CCCATGTTCCCTGCCTTTTCCGAATCCTTCGATTTGAACAACACTCAACT
CCTGCTCATCACCGGCGTGTGTATCCTGTCCTTTGCCTATGCCAACTTGA
TCGTCGTTCCCTGTTCCAATATCTTCGGTCGTCGCCTTACTTTCCTCGTC
TTTTTGTCGATCAGCTTCGCCTCATATATATGGGAGGCTCTCGCCTCGTC
TTATACCAGCTTTATCGTGGCCCGAGTGGTGAATGGAGCAGGGGCTGCGG
CCTGTGAGACAATACCCATGCAGACTGTTGCGGATATTTTCTTCTTATAC
GAGCGAGGACGATGGACTGTAGCTTATTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-16) |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:179230..180810 - |
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