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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:182457..185101- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003008-T1 ID=KJC3_003008-T1|Name=KJC3_003008-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2645bp|location=Sequence derived from alignment at ch3:182457..185101- (Aspergillus niger KJC3)
CGAATGGCCCCCAATTCACTAAAATGAAGCCAACTCATCTTCCGGACAAA
ACAACAGGGATTAACTGGTCTAGCTGGTTTAAATGCCCGTCTCCCATGCA
CCGCCCCTTAAAAAACGTTGGCCCAGGAAGCCTTTCCTCCTTCCTTCTTC
CCTCCCAAGAAAAAACAAACCCCCAAACTGCCTGCATCTGACCTCAGCCA
ACCATGGCTGCCAGGTCGTCGGATGGGCTTCGTCTCCTGTCCGATGTCAA
CATCCCGGACGCAAGATTGAACGACGACTCATCCGGTGACGATAAAAGTG
TAATTGATCTGCGCGATCTTGGTAGGGGGCCACGCGATTCGTTTCGTAGT
GACTTGACCGATACACCACCCAAAGGTGTCGATCATGGCGATCAACCTCA
TACTTTGCCAGTGCCAACCAATAAACCCAGGCGTCGGTGTTCGGGTCTCT
TCGTCACTCTTATCGTCCTGGGAGTATACACCACCATCTTGTCTGGGGTC
TTCTTCGTCGTCGCGTGTATCAAGCCCTTCTATGGCAGTTTGATCGGCAA
CAATGCCGGACTCACTGCCTCTTCCGCGTCCTTGCTGAGCGCCCTGTTAG
CCAAAACAATCGAGCTCTCCTATGTCACAGTTTGTGTCGCATTCCTGGGC
CAACTGTTGAGTCGACGGGCTCTCACGCATGGGTCTGAGGGCGTCAGCAT
CGCCGACATGACGCTGCGAACCTGGATCACGCAGCCAGGATCGCTGCTAA
TGCAGTGGGACGTGTTGCGCTATGTCGGCTGGACGACGCTTGGTGGATTG
ACGCTGATTGTTGCTCTGGTTGCGATGCTGTATACCACAGCTGCTGAAGC
GTTAGGTTGGTCACTCTGTCCCCTTGCCATTAGTATTAATCTAATACTCA
CTTGCTGACCCTCATGCGCTCTATCGGCTGTAGTATCTCCAAGCTTGGTT
TTGGGCCCCGTCCAACCCCGACTTCTGCAGGGAAATGTTTCCACCCAGTA
CTCCAACCCTTATTACTTGGAGGAAGCCTGTCAGAGTCCAATCACTGCCG
CCGTTGACCCGACATCCTGGAATGAGACCTGCCTGGCGATGGAGATAGCC
GGCCGCTCATACCATGACTACTACCAATACCTGCAAGGTTGGGCCGAAAT
GCTGAAAGCCGGAAACAACACCTCTACTGCACTCGCTTATCGTCCGCAGC
CACATGCCTTGTTATACGACAACACCACAGTAACTGGTCGCTGGATCGAG
ATTGTGAACACCACCGCCGTGTCCGAACAGCATGGTCGAGTCGTCAATAA
TGTTACTGCCGCCTACCCTCACGGAGGCCTCTTCGCCGCTGCTCGCAACC
CCGCAAATAAGATCCAGCAGCCAGTTGATATGTCCGGCGAGGGTAAATAC
ATTATACAAGCCTCTCTCCCTTCACCTGCAATCAATGTGATGTGTGTCGG
TATGTCTCATGACGAGCTGAAACCCCTCATCTACACCGAGTGGCCCAACC
ATAAGCCCTTCAACGCATCGACTTGGGCAACCGCTGCACCAACCTACTCG
ATCAACACGAACCGCACCGTCGCCGATGACCTTTTCGGCTTCAGCGAAGA
CCAAGGCGCCCCTGTCTTTCCGATTTATCCCAAAGACTACAACACCATTC
TAAATCCCAAAGTCGACAACACAACCTCCATCTACATCTTAGGCAGTGCT
CCTCCAGGTCACGACCCGAAGTACATCCTCTGCAGCTTGCGCGGAAAGCT
TTCCGGTCGCTGCTCAGCCCGGTACCAGGTCGACCCTAGCGGCGGTGACC
TGAGCTCCCGCTGCGAAGACGCGGCTGACGGGCTCCAATACAACCGGATA
CATCCTAACACGGCAGAGGATCAATACCTGATGAACTGGAAAAGCGTGGG
ATGGGAGTGGGCCGACACGGTGACACTCGGGTCAGGTATCATGGGTGACG
ACGCCAGTATCGAACGCACGCTGATGGAATTGATCCCGAGCTTCGATAAC
ACCACCAATACCTCTTCGCTAGATCCTCGACTCCCCTCGCTCAGTGAGGC
TTTGGCCGTCTTAGCGGGGAGTACCGCCCTCCTCGGCAGTCAGGATTCTC
CATTCGTTCCCGATTGGAATTACGCCGAGGCGAGTCTCGCTACCCCGGTT
GTGCAGGTGTTCAACGCGACGCTGCAGTCCGCGGGCTATGCGTCCGGCCG
GACGAGTGACTGGCAGCAGGTGTTTTATGTGATTCTGGCTGTGGTCTTCC
TGACGAACATCATGTGTCTGGGGTTCATCCTCTTCCAGGGACGCGGGCAG
TTAGTAACAGATTTCACGGAACCGCCGAATCTATTTGCTTTAGCCGTTAA
TAGTCCGGGGACGGTACATGCCTGGTCTGGAGCGCAGCTGGGAGCGGCAG
GGACTCCGCGCTTGCGCGATCGATGGCATGTCGATATGCGCGAGGAGAGC
GGACATTATTATATTCGTACCCGGGGTCAATTGCAGGACCTTGAGGATAG
GGAGGCGAACTAATGGCTATGATATGATTCTCCGAGGGCGGTTGGGGCTC
TTACTTTTACTGCATTGCAGGTGTTAGCGAATAGCGTTTATTGCATTAGA
CAGATAGTATTGTAATAATAAATGTCAGCATCAAGGTCACTGGAG back to topCoding sequence (CDS) from alignment at ch3:182457..185101- >KJC3_003008-T1 ID=KJC3_003008-T1|Name=KJC3_003008-T1|organism=Aspergillus niger KJC3|type=CDS|length=4464bp|location=Sequence derived from alignment at ch3:182457..185101- (Aspergillus niger KJC3)
TATCTCCAAGCTTGGTTTTGGGCCCCGTCCAACCCCGACTTCTGCAGGGA
AATGTTTCCACCCAGTACTCCAACCCTTATTACTTGGAGGAAGCCTGTCA
GAGTCCAATCACTGCCGCCGTTGACCCGACATCCTGGAATGAGACCTGCC
TGGCGATGGAGATAGCCGGCCGCTCATACCATGACTACTACCAATACCTG
CAAGGTTGGGCCGAAATGCTGAAAGCCGGAAACAACACCTCTACTGCACT
CGCTTATCGTCCGCAGCCACATGCCTTGTTATACGACAACACCACAGTAA
CTGGTCGCTGGATCGAGATTGTGAACACCACCGCCGTGTCCGAACAGCAT
GGTCGAGTCGTCAATAATGTTACTGCCGCCTACCCTCACGGAGGCCTCTT
CGCCGCTGCTCGCAACCCCGCAAATAAGATCCAGCAGCCAGTTGATATGT
CCGGCGAGGGTAAATACATTATACAAGCCTCTCTCCCTTCACCTGCAATC
AATGTGATGTGTGTCGGTATGTCTCATGACGAGCTGAAACCCCTCATCTA
CACCGAGTGGCCCAACCATAAGCCCTTCAACGCATCGACTTGGGCAACCG
CTGCACCAACCTACTCGATCAACACGAACCGCACCGTCGCCGATGACCTT
TTCGGCTTCAGCGAAGACCAAGGCGCCCCTGTCTTTCCGATTTATCCCAA
AGACTACAACACCATTCTAAATCCCAAAGTCGACAACACAACCTCCATCT
ACATCTTAGGCAGTGCTCCTCCAGGTCACGACCCGAAGTACATCCTCTGC
AGCTTGCGCGGAAAGCTTTCCGGTCGCTGCTCAGCCCGGTACCAGGTCGA
CCCTAGCGGCGGTGACCTGAGCTCCCGCTGCGAAGACGCGGCTGACGGGC
TCCAATACAACCGGATACATCCTAACACGGCAGAGGATCAATACCTGATG
AACTGGAAAAGCGTGGGATGGGAGTGGGCCGACACGGTGACACTCGGGTC
AGGTATCATGGGTGACGACGCCAGTATCGAACGCACGCTGATGGAATTGA
TCCCGAGCTTCGATAACACCACCAATACCTCTTCGCTAGATCCTCGACTC
CCCTCGCTCAGTGAGGCTTTGGCCGTCTTAGCGGGGAGTACCGCCCTCCT
CGGCAGTCAGGATTCTCCATTCGTTCCCGATTGGAATTACGCCGAGGCGA
GTCTCGCTACCCCGGTTGTGCAGGTGTTCAACGCGACGCTGCAGTCCGCG
GGCTATGCGTCCGGCCGGACGAGTGACTGGCAGCAGGTGTTTTATGTGAT
TCTGGCTGTGGTCTTCCTGACGAACATCATGTGTCTGGGGTTCATCCTCT
TCCAGGGACGCGGGCAGTTAGTAACAGATTTCACGGAACCGCCGAATCTA
TTTGCTTTAGCCGTTAATAGTCCGGGGACGGTACATGCCTGGTCTGGAGC
GCAGCTGGGAGCGGCAGGGACTCCGCGCTTGCGCGATCGATGGCATGTCG
ATATGCGCGAGGAGAGCGGACATTATTATATTCGTACCCGGGGTCAATTG
CAGGACCTTGAGGATAGGGAGGCGAACTAAATGGCTGCCAGGTCGTCGGA
TGGGCTTCGTCTCCTGTCCGATGTCAACATCCCGGACGCAAGATTGAACG
ACGACTCATCCGGTGACGATAAAAGTGTAATTGATCTGCGCGATCTTGGT
AGGGGGCCACGCGATTCGTTTCGTAGTGACTTGACCGATACACCACCCAA
AGGTGTCGATCATGGCGATCAACCTCATACTTTGCCAGTGCCAACCAATA
AACCCAGGCGTCGGTGTTCGGGTCTCTTCGTCACTCTTATCGTCCTGGGA
GTATACACCACCATCTTGTCTGGGGTCTTCTTCGTCGTCGCGTGTATCAA
GCCCTTCTATGGCAGTTTGATCGGCAACAATGCCGGACTCACTGCCTCTT
CCGCGTCCTTGCTGAGCGCCCTGTTAGCCAAAACAATCGAGCTCTCCTAT
GTCACAGTTTGTGTCGCATTCCTGGGCCAACTGTTGAGTCGACGGGCTCT
CACGCATGGGTCTGAGGGCGTCAGCATCGCCGACATGACGCTGCGAACCT
GGATCACGCAGCCAGGATCGCTGCTAATGCAGTGGGACGTGTTGCGCTAT
GTCGGCTGGACGACGCTTGGTGGATTGACGCTGATTGTTGCTCTGGTTGC
GATGCTGTATACCACAGCTGCTGAAGCGTTAGTATCTCCAAGCTTGGTTT
TGGGCCCCGTCCAACCCCGACTTCTGCAGGGAAATGTTTCCACCCAGTAC
TCCAACCCTTATTACTTGGAGGAAGCCTGTCAGAGTCCAATCACTGCCGC
CGTTGACCCGACATCCTGGAATGAGACCTGCCTGGCGATGGAGATAGCCG
GCCGCTCATACCATGACTACTACCAATACCTGCAAGGTTGGGCCGAAATG
CTGAAAGCCGGAAACAACACCTCTACTGCACTCGCTTATCGTCCGCAGCC
ACATGCCTTGTTATACGACAACACCACAGTAACTGGTCGCTGGATCGAGA
TTGTGAACACCACCGCCGTGTCCGAACAGCATGGTCGAGTCGTCAATAAT
GTTACTGCCGCCTACCCTCACGGAGGCCTCTTCGCCGCTGCTCGCAACCC
CGCAAATAAGATCCAGCAGCCAGTTGATATGTCCGGCGAGGGTAAATACA
TTATACAAGCCTCTCTCCCTTCACCTGCAATCAATGTGATGTGTGTCGGT
ATGTCTCATGACGAGCTGAAACCCCTCATCTACACCGAGTGGCCCAACCA
TAAGCCCTTCAACGCATCGACTTGGGCAACCGCTGCACCAACCTACTCGA
TCAACACGAACCGCACCGTCGCCGATGACCTTTTCGGCTTCAGCGAAGAC
CAAGGCGCCCCTGTCTTTCCGATTTATCCCAAAGACTACAACACCATTCT
AAATCCCAAAGTCGACAACACAACCTCCATCTACATCTTAGGCAGTGCTC
CTCCAGGTCACGACCCGAAGTACATCCTCTGCAGCTTGCGCGGAAAGCTT
TCCGGTCGCTGCTCAGCCCGGTACCAGGTCGACCCTAGCGGCGGTGACCT
GAGCTCCCGCTGCGAAGACGCGGCTGACGGGCTCCAATACAACCGGATAC
ATCCTAACACGGCAGAGGATCAATACCTGATGAACTGGAAAAGCGTGGGA
TGGGAGTGGGCCGACACGGTGACACTCGGGTCAGGTATCATGGGTGACGA
CGCCAGTATCGAACGCACGCTGATGGAATTGATCCCGAGCTTCGATAACA
CCACCAATACCTCTTCGCTAGATCCTCGACTCCCCTCGCTCAGTGAGGCT
TTGGCCGTCTTAGCGGGGAGTACCGCCCTCCTCGGCAGTCAGGATTCTCC
ATTCGTTCCCGATTGGAATTACGCCGAGGCGAGTCTCGCTACCCCGGTTG
TGCAGGTGTTCAACGCGACGCTGCAGTCCGCGGGCTATGCGTCCGGCCGG
ACGAGTGACTGGCAGCAGGTGTTTTATGTGATTCTGGCTGTGGTCTTCCT
GACGAACATCATGTGTCTGGGGTTCATCCTCTTCCAGGGACGCGGGCAGT
TAGTAACAGATTTCACGGAACCGCCGAATCTATTTGCTTTAGCCGTTAAT
AGTCCGGGGACGGTACATGCCTGGTCTGGAGCGCAGCTGGGAGCGGCAGG
GACTCCGCGCTTGCGCGATCGATGGCATGTCGATATGCGCGAGGAGAGCG
GACATTATTATATTCGTACCCGGGGTCAATTGCAGGACCTTGAGGATAGG
GAGGCGAACTAAATGGCTGCCAGGTCGTCGGATGGGCTTCGTCTCCTGTC
CGATGTCAACATCCCGGACGCAAGATTGAACGACGACTCATCCGGTGACG
ATAAAAGTGTAATTGATCTGCGCGATCTTGGTAGGGGGCCACGCGATTCG
TTTCGTAGTGACTTGACCGATACACCACCCAAAGGTGTCGATCATGGCGA
TCAACCTCATACTTTGCCAGTGCCAACCAATAAACCCAGGCGTCGGTGTT
CGGGTCTCTTCGTCACTCTTATCGTCCTGGGAGTATACACCACCATCTTG
TCTGGGGTCTTCTTCGTCGTCGCGTGTATCAAGCCCTTCTATGGCAGTTT
GATCGGCAACAATGCCGGACTCACTGCCTCTTCCGCGTCCTTGCTGAGCG
CCCTGTTAGCCAAAACAATCGAGCTCTCCTATGTCACAGTTTGTGTCGCA
TTCCTGGGCCAACTGTTGAGTCGACGGGCTCTCACGCATGGGTCTGAGGG
CGTCAGCATCGCCGACATGACGCTGCGAACCTGGATCACGCAGCCAGGAT
CGCTGCTAATGCAGTGGGACGTGTTGCGCTATGTCGGCTGGACGACGCTT
GGTGGATTGACGCTGATTGTTGCTCTGGTTGCGATGCTGTATACCACAGC
TGCTGAAGCGTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003008-T1.utr3p1 | KJC3_003008-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003008-T1.utr5p1 | KJC3_003008-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:182457..185101 - |
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