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KJC3_003043-T1, KJC3_003043-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003043-T1
Unique NameKJC3_003043-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:256707..258534-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003043-T1 ID=KJC3_003043-T1|Name=KJC3_003043-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1828bp|location=Sequence derived from alignment at ch3:256707..258534- (Aspergillus niger KJC3)
CAAATCTTTCCAGCCAAGCGATGAATTACTTGCAAACCCCTGTTCCCTGT
ACGGGTGATTCCGTAGAATAATCCCATTGGCCCCCATTGGGGAGGGATAT
TGTCCCTTTCATTCCCAACCACTCGCTGCTGCTACTGTCATACTGCGAGT
CACCACTTTCCTAACGCTGGCCAGCTTGTCTGTAGCGGAAATTGACGCCA
TGCTTCGGACTTAACGATGGGCCTTTGACTCAACAGTCTGCTCGTCCTGG
CTGTCTGTTTCTCCCATATATAGTAGAGAGCGCGCAGCTTCTATCAGATA
CATTACAAACACGGAGCATCATACAATCCAGAGCAAGCCAGTCACAATGC
CAGGCGAAACCAATATACCCCCTCGTCGAGACAGACATGTCTCCAAAGTC
CACATCGCCGACACCCCCATCACCCTCCGGAACTGGCATAAACATGTCAA
CTGGCTGAACGTGACCATGATCGTCCTGATCCCCCTCTACGACTAAAAAC
CGCCATCTGGGCAGTAGCATACTACTTCTTCACAGCCCTAGGCGTCACAG
CAGGTCTGTCCCACCACCACCGTACCCCCCTCTCACATCCCCTCTTCTAA
CCCATCGTAACCAACAGGCTACCACCGCCTCTGGGCCCACAGATCCTACA
CAGCAACCCTCCCCCTCCGCATCACCCTGGCCCTCGCCGCCGGGGGCTCC
GTCCAAGGTTCCGCTCGCTGGTGGGCACGCCTGCACCGCTCGCACCACCG
GTACACAGACACGGAGCGGGACCCTTACTCCGTACATAAGGGCATCTTCT
ACGCGCACTTCGGCTGGATGATACTGAAGCAGAACCCGAAGCGGTTCGGC
CGAACCGACATCTCCGATCTCAACGCCGACCCCGTGGTCGTCTGGCAGCA
TCGACACTTCCTGAAGATCGTGGTCCTCATGGGTCTTGTCGTTCCGATGC
TTGTCGCAGGCATCTGGGGTGACTGGTGGGGCGGGTTCGTGTACGCGGGC
ATCCTGCGCATCTTCTTCGTGCAGCAGGCCACTTTCTGCGTGAACTCTCT
GGCTCACTGGCTCGGCGAGCAGCCGTTCGATGATCGCAATTCACCCCGTG
ATCATGTCGTCACGGCGTTGGCGACGATGGGTGAGGGGTATCATAATTTT
CATCACGAGTTTCCGTCAGATTATCGCAATGCTATTCGGTGGTATCAGTA
TGATCCGACCAAGTGGGCCATTTGGTGCTGGGGACAGGTGGGATTGGCGC
GTGATTTGAAGATGTTTCGCGAGAATGAGATTGAGAAGGGGAGGGTGCAG
CAGTTACAGAAGAAGGTGGATAAGAAACGGGCAGAGTTGGATTGGGGGAC
TCCGTTGAGTGAGTTACCGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGG
CGAGGAGCAGGGCGTTAGTCGTTGTTGCTGGGGTGGTGCATGATGTTGAG
GACTTTGTAAAGGAACATCCTGGTGGGAGGGCCATGATCCAGGCTGGTGT
TGGGAAGGATGCGACCGCTATGTTCAATGGTGGGGTGTATTATCATTCGA
ATGCGGCGCATAATCTGCTGTCGATGATGCGGGTAGCGGTTATTCGGGGT
GGGAGTGAGGTGGAGATTTGGAAGAGGCCGCAGAAGGAGATGTAGATTAG
TTGCATGGTTTATGGGTGTCTTGTTCTGAATTTTTCTGATAGACAGATAT
GGTAGGGTTTGTCCCAATTAGGAAAGCCGGAGGTCGAAGTCCTCATACAA
ATGCTTCCGAAGCTTATACTTTCTTTGCCCTACTGTGTCTCCGTAGAACA
TAGTGCACGAAAATTGCATGTCGGCTAA
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Coding sequence (CDS) from alignment at ch3:256707..258534-

>KJC3_003043-T1 ID=KJC3_003043-T1|Name=KJC3_003043-T1|organism=Aspergillus niger KJC3|type=CDS|length=828bp|location=Sequence derived from alignment at ch3:256707..258534- (Aspergillus niger KJC3)
ATGATACTGAAGCAGAACCCGAAGCGGTTCGGCCGAACCGACATCTCCGA
TCTCAACGCCGACCCCGTGGTCGTCTGGCAGCATCGACACTTCCTGAAGA
TCGTGGTCCTCATGGGTCTTGTCGTTCCGATGCTTGTCGCAGGCATCTGG
GGTGACTGGTGGGGCGGGTTCGTGTACGCGGGCATCCTGCGCATCTTCTT
CGTGCAGCAGGCCACTTTCTGCGTGAACTCTCTGGCTCACTGGCTCGGCG
AGCAGCCGTTCGATGATCGCAATTCACCCCGTGATCATGTCGTCACGGCG
TTGGCGACGATGGGTGAGGGGTATCATAATTTTCATCACGAGTTTCCGTC
AGATTATCGCAATGCTATTCGGTGGTATCAGTATGATCCGACCAAGTGGG
CCATTTGGTGCTGGGGACAGGTGGGATTGGCGCGTGATTTGAAGATGTTT
CGCGAGAATGAGATTGAGAAGGGGAGGGTGCAGCAGTTACAGAAGAAGGT
GGATAAGAAACGGGCAGAGTTGGATTGGGGGACTCCGTTGAGTGAGTTAC
CGGTTATGGAGTGGGAGGAGTTTGTCGAGAGGGCGAGGAGCAGGGCGTTA
GTCGTTGTTGCTGGGGTGGTGCATGATGTTGAGGACTTTGTAAAGGAACA
TCCTGGTGGGAGGGCCATGATCCAGGCTGGTGTTGGGAAGGATGCGACCG
CTATGTTCAATGGTGGGGTGTATTATCATTCGAATGCGGCGCATAATCTG
CTGTCGATGATGCGGGTAGCGGTTATTCGGGGTGGGAGTGAGGTGGAGAT
TTGGAAGAGGCCGCAGAAGGAGATGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0020037heme binding
GO:0016717oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
OLE1_1KJC3_003043Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003043-T1KJC3_003043-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003043-T1.cdsKJC3_003043-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003043-T1.utr3p1KJC3_003043-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003043-T1.exon2KJC3_003043-T1.exon2Aspergillus niger KJC3exon
KJC3_003043-T1.exon1KJC3_003043-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003043-T1.utr5p2KJC3_003043-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_003043-T1.utr5p1KJC3_003043-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001522
DBxrefInterPro:IPR018506
DBxrefInterPro:IPR005804
DBxrefInterPro:IPR036400
DBxrefInterPro:IPR001199
DBxrefInterPro:IPR015876
DBxrefPFAM:PF00173
Productstearoyl-CoA 9-desaturase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:256707..258534 -
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