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KJC3_003061-T1, KJC3_003061-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003061-T1
Unique NameKJC3_003061-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:335151..337095-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003061-T1 ID=KJC3_003061-T1|Name=KJC3_003061-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1945bp|location=Sequence derived from alignment at ch3:335151..337095- (Aspergillus niger KJC3)
TTCTTTCATCAAACAACTCGAAACTGATGCTCAATACTGCACGTATCACC
TTGCCAGACAAGATACAATGGCCTGCGTGCTAGATTCAGGGATGGATCAA
CCAACATTCGATCTGATTGTCCAGCTACAGCTCCAAGAGACGGACCTTTA
TTTCGAGTCTTCCAAAGGGAAAGCACGCGACCCTACAGATGAGGAGTTGG
CCTTCCACTTGCAAAACGAGGAATGGGGAAATATCTCACAGTATCTGCAG
GATAGGCGAATGGCCATGAGTTTCGCGACTGCTGTGCAAGCTGACGGACA
TGTTCTGGCCGAGACCCAAGTCGAAGAAGAGATTGCCTCAAAAGACCGGA
TTCTTGCTCGCCAATTGACGGAAGATGGAAGCAATGTGCTTCCAAGTGAG
CTTATGTCGGAGTCAGCGGTCCTGGATGAGGAGACCTTAGCTAAACTTCA
AATCTTATATGTCAATAATATGGAAGACTACAACTTAACAGGAGACTTGG
ACACAGGAAAGAGTGAAGAAAATGATTGTGCTGAATCGTCTGCCCAGGCA
ATCCGACGAGCTGGTCACTCTTTACCACGAGCCCGACGATGTGTGGCTTG
CAGGGAACTAACCGATTTCGTGAACGTGATTCGCGCTCCCTGTCGGCACG
AGTATTGTCGATCCTGTTTGGCAGATCTCTTCAAGTCTTCAATGACAGAC
GAGTCTCTCTTCCCTCCGCGATGTTGTCGACAACCCATAAGTTTGACCAC
TGCTCGCATATTCTTGGAGTTTGATTTAGTGGAGCAGTATCAGAGAAAGA
AGGTTGAATACGAAACCCCGAACAGAACGTACTGCTACTCTCCCGAGTGT
GGTTCATTCATTGATATGTATCATATCAGTGGAGAAGTAGCTACATGCCC
TGACTGCGGGCACACGACTTGTACAAATTGCAAAGGACGAGCACACACTG
GTGACTGTCCCGATGACACCTCCCTGCAACAGCTACTAGCAACCGCACAG
GAAAATGGGTGGCAACGTTGCTTTTCATGCTGGCGAGTGGTGGAATTAAA
TTATGGTTGCAACCATATGATGTATGTGGCCTTGTTCCCTTGTCTCCGAA
CGCTTTCATCAGTTCATTTCATTCTATTCTGTTCTTTCTATTCTTCGTGT
TTTTTTCTTCATTTTCCAATTTTCTTTTCTCTTTTTCTTTTTTGGGTTTT
TCCACAACTCCAAATCTGACAAATATCGACAATAGCTGTCGCTGCGGTGC
CGAATTCTGTTACAATTGCGGTCTACAGTGGAAGAATTGCCAGTGTGAAC
AATGGAATGAGCATCGTCTCCTTGCCCGTGCATATCAAATAATCGATCGA
GAAGCGGATCAGCCGGCAGCTGCGGCCCTCCCACAAGATGCCGACGAAGC
CCTTGTGGAGGGTCAGCTCGTACCGGAGGCTCATGAGCCTCAATTTCAAA
CTCAGCAGGTGCACTCTGAGGATACAATTGTGGCAGGTGAGGAGCCAATT
GCAGCTCTTCCTTCTCCTACTACTCGCACAGCACGAGATGTTTTGGTTGC
AAGAACTATGCAAGAGCTCAGAGACAATCATGAGTGTGGGCACAGCAAAT
GGAAATACTTACGTGGGCCGCATCGATGTGAAGAGTGCTTTCATCATTTA
CGCGAATATATATTCGAGTGTCGTCAATGCCGGATTCAAGCATGCAATCG
ATGCAGAAGGAACAGACTGTAACTCAAGTGAAGGTATTTAACTCACATGA
TATGTTAATTAATGCCAAGTACACATAAAGTCTAACTGTATACAGACTAG
TTTCGAGAAGGCTAGGCTCTACGTTTAGGAGAGTCTGAGGTGCGCATGGT
GGTTGTGCGAATGACTACATTGATTCTTAAGTATGTGCAAAGTAATTTTG
ACAAGTTTTCTCCATCCGTAGTTCATCTGGCAGGGGCGTAAAAAA
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Coding sequence (CDS) from alignment at ch3:335151..337095-

>KJC3_003061-T1 ID=KJC3_003061-T1|Name=KJC3_003061-T1|organism=Aspergillus niger KJC3|type=CDS|length=2982bp|location=Sequence derived from alignment at ch3:335151..337095- (Aspergillus niger KJC3)
CTGTCGCTGCGGTGCCGAATTCTGTTACAATTGCGGTCTACAGTGGAAGA
ATTGCCAGTGTGAACAATGGAATGAGCATCGTCTCCTTGCCCGTGCATAT
CAAATAATCGATCGAGAAGCGGATCAGCCGGCAGCTGCGGCCCTCCCACA
AGATGCCGACGAAGCCCTTGTGGAGGGTCAGCTCGTACCGGAGGCTCATG
AGCCTCAATTTCAAACTCAGCAGGTGCACTCTGAGGATACAATTGTGGCA
GGTGAGGAGCCAATTGCAGCTCTTCCTTCTCCTACTACTCGCACAGCACG
AGATGTTTTGGTTGCAAGAACTATGCAAGAGCTCAGAGACAATCATGAGT
GTGGGCACAGCAAATGGAAATACTTACGTGGGCCGCATCGATGTGAAGAG
TGCTTTCATCATTTACGCGAATATATATTCGAGTGTCGTCAATGCCGGAT
TCAAGCATGCAATCGATGCAGAAGGAACAGACTGTAAATGGCCTGCGTGC
TAGATTCAGGGATGGATCAACCAACATTCGATCTGATTGTCCAGCTACAG
CTCCAAGAGACGGACCTTTATTTCGAGTCTTCCAAAGGGAAAGCACGCGA
CCCTACAGATGAGGAGTTGGCCTTCCACTTGCAAAACGAGGAATGGGGAA
ATATCTCACAGTATCTGCAGGATAGGCGAATGGCCATGAGTTTCGCGACT
GCTGTGCAAGCTGACGGACATGTTCTGGCCGAGACCCAAGTCGAAGAAGA
GATTGCCTCAAAAGACCGGATTCTTGCTCGCCAATTGACGGAAGATGGAA
GCAATGTGCTTCCAAGTGAGCTTATGTCGGAGTCAGCGGTCCTGGATGAG
GAGACCTTAGCTAAACTTCAAATCTTATATGTCAATAATATGGAAGACTA
CAACTTAACAGGAGACTTGGACACAGGAAAGAGTGAAGAAAATGATTGTG
CTGAATCGTCTGCCCAGGCAATCCGACGAGCTGGTCACTCTTTACCACGA
GCCCGACGATGTGTGGCTTGCAGGGAACTAACCGATTTCGTGAACGTGAT
TCGCGCTCCCTGTCGGCACGAGTATTGTCGATCCTGTTTGGCAGATCTCT
TCAAGTCTTCAATGACAGACGAGTCTCTCTTCCCTCCGCGATGTTGTCGA
CAACCCATAAGTTTGACCACTGCTCGCATATTCTTGGAGTTTGATTTAGT
GGAGCAGTATCAGAGAAAGAAGGTTGAATACGAAACCCCGAACAGAACGT
ACTGCTACTCTCCCGAGTGTGGTTCATTCATTGATATGTATCATATCAGT
GGAGAAGTAGCTACATGCCCTGACTGCGGGCACACGACTTGTACAAATTG
CAAAGGACGAGCACACACTGGTGACTGTCCCGATGACACCTCCCTGCAAC
AGCTACTAGCAACCGCACAGGAAAATGGGTGGCAACGTTGCTTTTCATGC
TGGCGAGTGGTGGAATTAAATTATGGTTGCAACCATATGATCTGTCGCTG
CGGTGCCGAATTCTGTTACAATTGCGGTCTACAGTGGAAGAATTGCCAGT
GTGAACAATGGAATGAGCATCGTCTCCTTGCCCGTGCATATCAAATAATC
GATCGAGAAGCGGATCAGCCGGCAGCTGCGGCCCTCCCACAAGATGCCGA
CGAAGCCCTTGTGGAGGGTCAGCTCGTACCGGAGGCTCATGAGCCTCAAT
TTCAAACTCAGCAGGTGCACTCTGAGGATACAATTGTGGCAGGTGAGGAG
CCAATTGCAGCTCTTCCTTCTCCTACTACTCGCACAGCACGAGATGTTTT
GGTTGCAAGAACTATGCAAGAGCTCAGAGACAATCATGAGTGTGGGCACA
GCAAATGGAAATACTTACGTGGGCCGCATCGATGTGAAGAGTGCTTTCAT
CATTTACGCGAATATATATTCGAGTGTCGTCAATGCCGGATTCAAGCATG
CAATCGATGCAGAAGGAACAGACTGTAAATGGCCTGCGTGCTAGATTCAG
GGATGGATCAACCAACATTCGATCTGATTGTCCAGCTACAGCTCCAAGAG
ACGGACCTTTATTTCGAGTCTTCCAAAGGGAAAGCACGCGACCCTACAGA
TGAGGAGTTGGCCTTCCACTTGCAAAACGAGGAATGGGGAAATATCTCAC
AGTATCTGCAGGATAGGCGAATGGCCATGAGTTTCGCGACTGCTGTGCAA
GCTGACGGACATGTTCTGGCCGAGACCCAAGTCGAAGAAGAGATTGCCTC
AAAAGACCGGATTCTTGCTCGCCAATTGACGGAAGATGGAAGCAATGTGC
TTCCAAGTGAGCTTATGTCGGAGTCAGCGGTCCTGGATGAGGAGACCTTA
GCTAAACTTCAAATCTTATATGTCAATAATATGGAAGACTACAACTTAAC
AGGAGACTTGGACACAGGAAAGAGTGAAGAAAATGATTGTGCTGAATCGT
CTGCCCAGGCAATCCGACGAGCTGGTCACTCTTTACCACGAGCCCGACGA
TGTGTGGCTTGCAGGGAACTAACCGATTTCGTGAACGTGATTCGCGCTCC
CTGTCGGCACGAGTATTGTCGATCCTGTTTGGCAGATCTCTTCAAGTCTT
CAATGACAGACGAGTCTCTCTTCCCTCCGCGATGTTGTCGACAACCCATA
AGTTTGACCACTGCTCGCATATTCTTGGAGTTTGATTTAGTGGAGCAGTA
TCAGAGAAAGAAGGTTGAATACGAAACCCCGAACAGAACGTACTGCTACT
CTCCCGAGTGTGGTTCATTCATTGATATGTATCATATCAGTGGAGAAGTA
GCTACATGCCCTGACTGCGGGCACACGACTTGTACAAATTGCAAAGGACG
AGCACACACTGGTGACTGTCCCGATGACACCTCCCTGCAACAGCTACTAG
CAACCGCACAGGAAAATGGGTGGCAACGTTGCTTTTCATGCTGGCGAGTG
GTGGAATTAAATTATGGTTGCAACCATATGAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003061KJC3_003061Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003061-T1KJC3_003061-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003061-T1.cdsKJC3_003061-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003061-T1.utr3p2KJC3_003061-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_003061-T1.utr3p1KJC3_003061-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003061-T1.exon3KJC3_003061-T1.exon3Aspergillus niger KJC3exon
KJC3_003061-T1.exon2KJC3_003061-T1.exon2Aspergillus niger KJC3exon
KJC3_003061-T1.exon1KJC3_003061-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003061-T1.utr5p1KJC3_003061-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017907
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR002867
DBxrefPFAM:PF01485
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:335151..337095 -
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