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KJC3_003080-T1, KJC3_003080-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003080-T1
Unique NameKJC3_003080-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:611282..612646+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003080-T1 ID=KJC3_003080-T1|Name=KJC3_003080-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1365bp|location=Sequence derived from alignment at ch3:611282..612646+ (Aspergillus niger KJC3)
GCATCCCACAAACTCTCCTCTCCTGCTTCGACATGCCCAGGAAAATGTCT
AGACTCGAAAGGAGCTTCAATACCCAAAGTATGGTTCTCCAGAAGTCAAG
AATAAAATATTTATGTCCAAAGTGCCTCCAAGGTTTCTCCCGCTCCGACG
TTTTATACCAGCATTTCCGACAGAAGGCAGATGCGATCCATAAAGGGCTT
GATTCGAATAAAAGCAATTTCGCACTGTTCCTTTCAAGCTATCAGGGATG
TATGGGAGCTCTGATTCCAGCTGCAAAGCTACCGAAAGCGCCAGATTGTT
TTGATGTTTTTTTTGTTATTGAACACTATGGCGAAGAAACAGAAAGCCCA
AACATATCAGATTATGGTATGCAGTCTATATATATGTCCCAGTCCATGGA
CAATTCCCTTTACTAAAACAAGCATGCTTCAAGCCCAGTCCTATACGTCT
ACACCTTCTATGCATTCCCACAGCTGCAACTTTTCTGTTCCGCTTTACCA
TGATCGCCAGCCGCGTGGCTATGATCATGATTTACATGGAGGTACTGCAT
TGAGTACTATGCCTGGTGAGGATCTGACTACTGTTTAGAGCGACTGCCAG
TTTGCTAAATATTACCGACAAAGTGCCTGAGCAGCATGTACGACACCTGC
AAATACTTCACGATGTAGAAGTGGAGGCTAAGATCTGTGCACTTCTACCT
CAAATGGATAATTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCA
TCATGATCTTGGCGTTATTGTTCCGTCTGTGGATGTTGATAGGCCATTGA
TCCCAGTCCGAGACCTGCTATACAAAGGGGTAAGTTTCTAAATATGCTTG
GTAAGTGTTCGTCGCTCATCATTAATAGTTCGGAACATTCGCCCTCATAC
GCACATCCAAGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTAT
ACGGTGCTCAGAGTAGACGGGCCAGGCCTAATCGGCAACCAGAAAGTGGC
CATAGGCGAGTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTC
TGATCCTTCTGATCGGCGTTTTCCCAACGGTAGTAGTTGGACAGAAGGTC
TAGCACACAGATTGTCGCGGTGTACTTAATGTGGATGAATTTACACATGG
ATTGTTGTCATTGCGGGTGCGGGCTGGCCTGGTTGAAGGGCTTCGTTTTG
ATTAACCATAGCAGAACGACAATCTGAGCACAGTTATCTTCAGACCAATG
CACGGTCGCAGACAGAATAGTCTTGGCACGGACGTACATAGGATGGAGAT
ATGCCCGTGAAAAGCGTTACTACTTTGCTACCTACCTTTCTATATGTACA
AAGGATGATATTGTC
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Coding sequence (CDS) from alignment at ch3:611282..612646+

>KJC3_003080-T1 ID=KJC3_003080-T1|Name=KJC3_003080-T1|organism=Aspergillus niger KJC3|type=CDS|length=3588bp|location=Sequence derived from alignment at ch3:611282..612646+ (Aspergillus niger KJC3)
ATGCCCAGGAAAATGTCTAGACTCGAAAGGAGCTTCAATACCCAAAGTAT
GGTTCTCCAGAAGTCAAGAATAAAATATTTATGTCCAAAGTGCCTCCAAG
GTTTCTCCCGCTCCGACGTTTTATACCAGCATTTCCGACAGAAGGCAGAT
GCGATCCATAAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCCT
TTCAAGCTATCAGGGATGTATGGGAGCTCTGATTCCAGCTGCAAAGCTAC
CGAAAGCGCCAGATTGTTTTGATGTTTTTTTTGTTATTGAACACTATGGC
GAAGAAACAGAAAGCCCAAACATATCAGATTATGCCCAGTCCTATACGTC
TACACCTTCTATGCATTCCCACAGCTGCAACTTTTCTGTTCCGCTTTACC
ATGATCGCCAGCCGCGTGGCTATGATCATGATTTACATGGAGGTACTGCA
TTGAGTACTATGCCTGTGCCTGAGCAGCATGTACGACACCTGCAAATACT
TCACGATGTAGAAGTGGAGGCTAAGATCTGTGCACTTCTACCTCAAATGG
ATAATTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCATGAT
CTTGGCGTTATTGTTCCGTCTGTGGATGTTGATAGGCCATTGATCCCAGT
CCGAGACCTGCTATACAAAGGGTTCGGAACATTCGCCCTCATACGCACAT
CCAAGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGTG
CTCAGAGTAGACGGGCCAGGCCTAATCGGCAACCAGAAAGTGGCCATAGG
CGAGTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATCC
TTCTGATCGGCGTTTTCCCAACGGTAGTAGTTGGACAGAAGGTCTAGATG
CCCAGGAAAATGTCTAGACTCGAAAGGAGCTTCAATACCCAAAGTATGGT
TCTCCAGAAGTCAAGAATAAAATATTTATGTCCAAAGTGCCTCCAAGGTT
TCTCCCGCTCCGACGTTTTATACCAGCATTTCCGACAGAAGGCAGATGCG
ATCCATAAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCCTTTC
AAGCTATCAGGGATGTATGGGAGCTCTGATTCCAGCTGCAAAGCTACCGA
AAGCGCCAGATTGTTTTGATGTTTTTTTTGTTATTGAACACTATGGCGAA
GAAACAGAAAGCCCAAACATATCAGATTATGCCCAGTCCTATACGTCTAC
ACCTTCTATGCATTCCCACAGCTGCAACTTTTCTGTTCCGCTTTACCATG
ATCGCCAGCCGCGTGGCTATGATCATGATTTACATGGAGGTACTGCATTG
AGTACTATGCCTGTGCCTGAGCAGCATGTACGACACCTGCAAATACTTCA
CGATGTAGAAGTGGAGGCTAAGATCTGTGCACTTCTACCTCAAATGGATA
ATTGGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCATGATCTT
GGCGTTATTGTTCCGTCTGTGGATGTTGATAGGCCATTGATCCCAGTCCG
AGACCTGCTATACAAAGGGTTCGGAACATTCGCCCTCATACGCACATCCA
AGGATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGTGCTC
AGAGTAGACGGGCCAGGCCTAATCGGCAACCAGAAAGTGGCCATAGGCGA
GTCAATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATCCTTC
TGATCGGCGTTTTCCCAACGGTAGTAGTTGGACAGAAGGTCTAGATGCCC
AGGAAAATGTCTAGACTCGAAAGGAGCTTCAATACCCAAAGTATGGTTCT
CCAGAAGTCAAGAATAAAATATTTATGTCCAAAGTGCCTCCAAGGTTTCT
CCCGCTCCGACGTTTTATACCAGCATTTCCGACAGAAGGCAGATGCGATC
CATAAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCCTTTCAAG
CTATCAGGGATGTATGGGAGCTCTGATTCCAGCTGCAAAGCTACCGAAAG
CGCCAGATTGTTTTGATGTTTTTTTTGTTATTGAACACTATGGCGAAGAA
ACAGAAAGCCCAAACATATCAGATTATGCCCAGTCCTATACGTCTACACC
TTCTATGCATTCCCACAGCTGCAACTTTTCTGTTCCGCTTTACCATGATC
GCCAGCCGCGTGGCTATGATCATGATTTACATGGAGGTACTGCATTGAGT
ACTATGCCTGTGCCTGAGCAGCATGTACGACACCTGCAAATACTTCACGA
TGTAGAAGTGGAGGCTAAGATCTGTGCACTTCTACCTCAAATGGATAATT
GGTTAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCATGATCTTGGC
GTTATTGTTCCGTCTGTGGATGTTGATAGGCCATTGATCCCAGTCCGAGA
CCTGCTATACAAAGGGTTCGGAACATTCGCCCTCATACGCACATCCAAGG
ATGTTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGTGCTCAGA
GTAGACGGGCCAGGCCTAATCGGCAACCAGAAAGTGGCCATAGGCGAGTC
AATCTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATCCTTCTGA
TCGGCGTTTTCCCAACGGTAGTAGTTGGACAGAAGGTCTAGATGCCCAGG
AAAATGTCTAGACTCGAAAGGAGCTTCAATACCCAAAGTATGGTTCTCCA
GAAGTCAAGAATAAAATATTTATGTCCAAAGTGCCTCCAAGGTTTCTCCC
GCTCCGACGTTTTATACCAGCATTTCCGACAGAAGGCAGATGCGATCCAT
AAAGGGCTTGATTCGAATAAAAGCAATTTCGCACTGTTCCTTTCAAGCTA
TCAGGGATGTATGGGAGCTCTGATTCCAGCTGCAAAGCTACCGAAAGCGC
CAGATTGTTTTGATGTTTTTTTTGTTATTGAACACTATGGCGAAGAAACA
GAAAGCCCAAACATATCAGATTATGCCCAGTCCTATACGTCTACACCTTC
TATGCATTCCCACAGCTGCAACTTTTCTGTTCCGCTTTACCATGATCGCC
AGCCGCGTGGCTATGATCATGATTTACATGGAGGTACTGCATTGAGTACT
ATGCCTGTGCCTGAGCAGCATGTACGACACCTGCAAATACTTCACGATGT
AGAAGTGGAGGCTAAGATCTGTGCACTTCTACCTCAAATGGATAATTGGT
TAGATGGGACTTTGCCTCTTTCGGATCAGCCCCATCATGATCTTGGCGTT
ATTGTTCCGTCTGTGGATGTTGATAGGCCATTGATCCCAGTCCGAGACCT
GCTATACAAAGGGTTCGGAACATTCGCCCTCATACGCACATCCAAGGATG
TTTTCTCGCCTCAAAACATCCCCGAGGCTGTCTATACGGTGCTCAGAGTA
GACGGGCCAGGCCTAATCGGCAACCAGAAAGTGGCCATAGGCGAGTCAAT
CTGGGTTAGCCATCAGACAACCTTATCCGCTGGTCTGATCCTTCTGATCG
GCGTTTTCCCAACGGTAGTAGTTGGACAGAAGGTCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003080KJC3_003080Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003080-T1KJC3_003080-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003080-T1.utr5p1KJC3_003080-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003080-T1.exon1KJC3_003080-T1.exon1Aspergillus niger KJC3exon
KJC3_003080-T1.exon2KJC3_003080-T1.exon2Aspergillus niger KJC3exon
KJC3_003080-T1.exon3KJC3_003080-T1.exon3Aspergillus niger KJC3exon
KJC3_003080-T1.exon4KJC3_003080-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003080-T1.cdsKJC3_003080-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003080-T1.utr3p1KJC3_003080-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013087
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:611282..612646 +
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