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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:751062..753086+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003099-T1 ID=KJC3_003099-T1|Name=KJC3_003099-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2025bp|location=Sequence derived from alignment at ch3:751062..753086+ (Aspergillus niger KJC3)
GCTTTCCCATCGGTTTGAATGGCCGTTGCGTCCCTGTAGCCCGGCAGCGA
GACCATGACTACCCACCTTCCTTTGGCTGATGTCACTTTTCCAGCGACAA
TCGAGGTATTCCCTGCAATTCCCTCCTCTTCCTTCCCTTCTACTGCTGCC
GCCTCAACGGCTCAAGGGCGATCCACCGCAGTTCCGGTCGCGACTTTACG
ATCGAACGTAGTGAAACTGGAGAAGTCCTCCCCAATACCGTCCGCATTGA
CCTCTGCGGATGCGGAAACACTAGCAGGCCACAAACACAAGCTCAAAAGT
ACCTCTGCACGAGGTGTAGCGAATCTTACCCCCGAACAATTGGCGAAGAA
GCGAGTCAGGGACCGGCAGGCCCAGCGTGCCATTCGCGAAAAGACGAAGG
CTCATATTGATCTCCTGGAACGACGGGTCCGCGAACTATCGACGCAGAAG
CAGTTCTTGGATCTTCAGGCGGTATTGAGGCAAAATGAAATCATCCAAGC
AGAAAACCGGAAGATCAGGCAAGGGCTAAAGGCGATCATGGATATTCTTC
AGCCATTGCTGGGAGACCACAAGCTGAATACTCTGCCTTCCACGCCTTCC
ACAACCGCTACTCACATTTCCTCAGTAACATCAACGCCGCCTTTATCTAA
CAGCTTGTGTTTCTCAGCCAATTCCGAGAGGTCAGCCGCAGGCGAACAAC
CGTACACTGAGTCTGCTGCGAGCACAGGGGCATCTTCTTCCACCGCCCAA
GCGGCCGTCACATCTGGCACGGCACGCCATGATATCACAACGAGCGGTCC
AGCTTATTCTCGCATTGTGTTCGACGATCAGCGACATAATATGGCTCACG
GTCTGGCCTCTGGCGGAACGGATGAACGAATGGGCTTCAATTTCCTGCTT
GATGCATCGCAGCGAGTACCCAAAGTGGAGGGGCTTTGACGCTTCTCAGA
GACACTGTGGCCACCTTCGAACCCATCTTCAACATATTTGTCGAACCGCT
CATCTTTCGATGGCAGAACCGCACTTGCCTGCTCACCTAACCTAAATTCG
CAACGTTGCTCCTACATGCACTCTAGACGCCATCCTTTAGGACTTCCTTC
ATAACCGACAACATCAAGCAGCGAAGAGGGTATTGGAGCAGAGTGTCGTG
GGCTCCCCTTATCCCAGGGTCTTGTCCTCGCTCAGTAAGGAAAAAGGCGT
CTATCCGCATTCCTTATCAAACGTATTCAACGATATCTTGCGGACATTCC
CGGATATCTCCACCCCCCCAGAATAAGTGGCTGTACTGTTTCCCATATTC
CTCATGATGCGGTGGCAGATTTTTCCAATACCTGATGATTATGATCGATT
GCCTGAGTGGCTCAACCCTCGTCGGTCGCAGCTTCTCACAACCCGTCCGT
CGTGGATAGACTGCCTGCCCTGGCCGCGGATGCGAGATCATTTGATGATG
TCGTATCGGGGATTATCCCACCGAGAACTGGCTCATTCCCTTTACACGTA
CACTGTGTGAATTGGCCCTATGAAGCGACAGAACACGTCCCATCTTCCGG
TGATGGGGACGAGCTTCTGATAAATCTTGTCTTCGAAAGGCGCTTCCGCA
ATCCCGGCAACTGGTTGCTGGGACCTGCTTTTGCAGAAGCTTATCCTTCC
TTGGTTGACGATGAGGACCAGTGCTTCGCATGTATGATGACGATTCAAGG
GAACGTTTCAGCTTCTGCGCTCTGTCTCTACATCGCATCATTTCGAAATG
GGACATCACTCATCTGTGATACTCTTTTCATTGTTCTAGCTTCATCGTAT
TATGTTGGACGATGATGAAGTGAGTTTCTTTTTTTTTACTCTCGCCTGTG
CTTTCGTAAATCGTGGACAGACTCGTCAGGTTCTAAGGGACAGAGGCACC
GAAGCCCTGTGATGTAATTTTGTATGCTTGCTTTATCAAATTCCACAGCA
GTTGTACTGTACGACCGTTTTTTATTCCTGTCTTATCGACGCATGTACAT
ACCGTAGGTGACCCATTACGTGAGG back to topCoding sequence (CDS) from alignment at ch3:751062..753086+ >KJC3_003099-T1 ID=KJC3_003099-T1|Name=KJC3_003099-T1|organism=Aspergillus niger KJC3|type=CDS|length=885bp|location=Sequence derived from alignment at ch3:751062..753086+ (Aspergillus niger KJC3)
ATGACTACCCACCTTCCTTTGGCTGATGTCACTTTTCCAGCGACAATCGA
GGTATTCCCTGCAATTCCCTCCTCTTCCTTCCCTTCTACTGCTGCCGCCT
CAACGGCTCAAGGGCGATCCACCGCAGTTCCGGTCGCGACTTTACGATCG
AACGTAGTGAAACTGGAGAAGTCCTCCCCAATACCGTCCGCATTGACCTC
TGCGGATGCGGAAACACTAGCAGGCCACAAACACAAGCTCAAAAGTACCT
CTGCACGAGGTGTAGCGAATCTTACCCCCGAACAATTGGCGAAGAAGCGA
GTCAGGGACCGGCAGGCCCAGCGTGCCATTCGCGAAAAGACGAAGGCTCA
TATTGATCTCCTGGAACGACGGGTCCGCGAACTATCGACGCAGAAGCAGT
TCTTGGATCTTCAGGCGGTATTGAGGCAAAATGAAATCATCCAAGCAGAA
AACCGGAAGATCAGGCAAGGGCTAAAGGCGATCATGGATATTCTTCAGCC
ATTGCTGGGAGACCACAAGCTGAATACTCTGCCTTCCACGCCTTCCACAA
CCGCTACTCACATTTCCTCAGTAACATCAACGCCGCCTTTATCTAACAGC
TTGTGTTTCTCAGCCAATTCCGAGAGGTCAGCCGCAGGCGAACAACCGTA
CACTGAGTCTGCTGCGAGCACAGGGGCATCTTCTTCCACCGCCCAAGCGG
CCGTCACATCTGGCACGGCACGCCATGATATCACAACGAGCGGTCCAGCT
TATTCTCGCATTGTGTTCGACGATCAGCGACATAATATGGCTCACGGTCT
GGCCTCTGGCGGAACGGATGAACGAATGGGCTTCAATTTCCTGCTTGATG
CATCGCAGCGAGTACCCAAAGTGGAGGGGCTTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003099-T1.utr5p1 | KJC3_003099-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003099-T1.utr3p1 | KJC3_003099-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:751062..753086 + |
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