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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1054885..1058450- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003139-T3 ID=KJC3_003139-T3|Name=KJC3_003139-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3566bp|location=Sequence derived from alignment at ch3:1054885..1058450- (Aspergillus niger KJC3)
GATGTTCGCGGGACCGAGGGTGGCGAGCAGGCCTCCTTTGGCAAGGAGTG
ACCGCCCCAAACGCGCATAAATAGCCATAGCCGTCTCCCTTCTTCCAGCG
ACATCATCCATTCTCCTCTACCTTTTCCTGTTGCCCATCGGGCGGTTCTC
ATGCGCAATGACGTATTCGGGCCTCCCTCGGAGGAAACATGCTCCAGGAG
ATGACAACCCTGGCCGCAAGTCCTACCTGTACTATGCGCAGCGGCGAAAG
CTGCACCTGGAAGGCGGGCCAACGCTACCGAAATACTCGCCAAACACCAA
TGTTTCTGCGGCATCAGTGAGAGGGAAATGGGTGAGGTATCGTTCGGTTA
GCTAAATTTCTAGTTTTATCACGGTATTACTTACTCCTGTCGTCGATAGA
TTCTGCACCGAGGCATGTCTGGACCCGGACGATCTCCTAAAAAACATGAC
TTCAGCAGACGTCAAATCCTGGTTCGACTGGATCGAAAGAAACTTCAAAG
GGTCTATCAAAGCCCACAGCGCGCTTGCCAACTACTGGAGAACTTTGAAG
AGGCTATACTCTTTGAAAAACCGCCGGGAGATGGATGCAGATATGAGGAG
AGATTGCCTCAACGTAGGTGATGGTCTCCAAGTACCTATTCATGAGATCT
ATCTAATGGCAAGCCCTAGTATATGAATGTTGTCAGTTCGAGAATGGCTT
TGCGTAAGCACCCACTGCCAAAGCCGACGGGCCAGTCGGAGGATCTTTTG
CAGTATCTTGTGTCCCATCTTGTGGATTGTGATTCGGTGTTCGCGGACGA
AAAGCAGCGTCTCTACGCCCTCTCGGGGCTCAATCTGTCCTGCATCTCTG
CCAGTCGAGCCGTATCTTTTTTTGATACGAGACACCGCCTTCAATTTCAG
GCGGACGGCACTTTGGTACCACCTGTAGACACGTCAGCTAAGGTTAGAAC
GCCTTTGTCTTCCATCGAGGAGCCCCTGTGTGATCCAGGCACCAAAATCA
ACTTGCAAAACGACGATCATGCGGAAGGAGGCTCGACATCCGAGACGAGC
TCGTATTCTGACTCGGAAGTGGATACGGCGAGCGACAGCGATCACCAGTC
GGACTGTTCCAGTGTCACAGATGACGGGTACCTTAACGGGAATGAGGAGA
CGGGCACTATTCTTTGGCGGCACGTGGAGTTCTACATTGTTCGTAACCCA
GTGCCTGGACGTCGCCATATCTTAGCCGCCATTGTGTCCATCCTGCATAC
TAAAGGGGAAGGAAGGAAGTTTCGGCTGTAAGTCATCGAGTAACGTGATA
ATGAGGTGGTGCCACGTACTTACTTAATCACCAGGAAGAGATACGTTATC
GAGCACGAGGATAATTTGATATTCGATGTGCTATCACAGCTTCTGGCGCT
GGCAATACATGATGATATCTTCGAGGCTACTATTCAAGATGTGTCCCATA
TATACACAGTACCAATTCCTGATCATCGAAAGGGCATCCAGCTGAAGATA
AAGAGAGAAAAGCTGGATGTATCGGTCTTCCGTGAGCCTGAACGTACTCC
CCAGGGCTACAGGACATCTGATTCGTGCCCTATGAAGTCCAAGACCTGGA
GCCGATATGTCAAACGGATTGGAGTGCGAAGTGGCCAGGAACGTAACCTT
ACACAGAAGGTGTTCCGGCGCGGTGCAATTAATGCCATTAATAGTAAGAC
CACTTTTGGTACTGCTCATTCTTTATGGCTTACATGAACATCGACTTAGA
CAGTGCTCCATCCTCGATCCGTGATCAAGTCGCGGATCACGAATCTAATG
CCGTGAAATACTACCTCAATGAGATAGTCGATTTTGATACAGCGGCAGCG
TTTCACAAACGCCCATCGAACAAGGTCGTTCAACGTGAGCTGAGATCAGC
GACCTTGCTGGCAGATAAAACCGCACCTATTGGATTGACGGCTACCCAGG
CTAAAAAAATCACTACAGACCCAGAGGTCCATCGTCTTCGAAGAGTCTGT
CGCGCATTGACTGCGGAAATTCGCAGCCAGGGCTATAAACGTGTGAAGGA
TGCCGCAGGCACCGAGATTGGTGAGCGGAAGAAACGTGCAGATGCCGAGC
TCAACAGTACACTTACGAAGCTCCGAGAGGAGGAGAAGGAGAGGAATCGC
CGAAGGCACTTTAGGAAGACAGACACGGCTATTTTCAACCAACAGTACGA
GCTCGATCGGACCTCTCCTGAGGCTAAACTACAGCCTCATGTGGCCCGGA
CCTACCAAATCCTCGAGCGCAAGGAGCTCGTTGATCTGCTCTGCTATTCA
ACTCCTACCAAAACAGACGAAGAAGCTCATCTTCGACGGTTAAGGTACAT
CCGCCTTATGGTCCGATGGCAAGACCGGAAGGAGAGCCCTCGGCGGGGTA
AGCAGTCAGTGACCATATCAAAGCCCCAGGCAGCGAACCCTTCATCTGCC
TGTGTCGTCGAAAATTTCGACCCACTGCAATGTCCATTTTGCCTTTCGGA
CACGCGCCTCTCACCTGCTGACCGCACGAAGCGAAAGAGCAAAACAAACA
AGCTCTGGGACCACGTGGAAAAGATTCATGAGCAAGAGCTTGCAGCATTT
GACTCGGGATTTCGCAAATGCGGACTATGTAGGCTGAAGGATATTGACTT
TGTGCCATCTAGCGTGTCCAATTTCAAGAACCACACCCACACCGTCCATG
GAATCAGACTTAGACCCTAGTTTGATTCGCTCAAATAGATGAATTCGACT
TCGTGAAACTTGCACGGACTTTACCAATTTAAGAATAAATTTCCATCATC
TTCTCGAAAGGTGCTGGCTGCCTTCCGACGATAGTCTATTCCGTGAGAGC
CTGGAGAATAAATTGAGACCAAGAAGCCAGAACAGCAGCGGGATTCCCGC
CTACTCTGTCGGTTCATCGACTCACGCCAGCTGGAAATTTGCAATGCTAC
TGCCACCGCCACGTCGCGAGTCCTCCGCTGCGTCGGGATAAGAGGTTGGG
AAGTAGATCATTATATGCAAAGACTTCCCAAAACAGCGGCCGTCCTGCTC
ACTGTAGTATATATTGGGGTTCTCGTCTGCATTTTTTGGGTGTTTGTTTC
CCCTTTATTCTGCGTTACAGTCTATCTCTTACTACATATGCTGTATTGAG
CTCCAGAAGAGACATTTCTAATATACAGCGGTGTTGGTGGTGAATTCATA
CTGGCCCCTCGCCTAGGCGAGACCGCTACCCAATTCCTATATACGTCTTA
CGGTACACCATTGATTTTCGGCAGATTTGGAGCCTCATCCAGGCCTTTGG
TGGTCTACATGTCTGGTGTTCCGTTCCGCGGCCTTGCGGCGCGCGGCTCA
GCTATCTTGGAGTCCAGATTGAAGGGCTCCTCGCTAGTGCCCTTAGCAAT
CATATTTTACTACAGAACACTCATACGACGATTACCTTGGGCCTAGAATG
GCCAACCAGGTCGGGCAGTACCGTTGCCTGCTTCTAGTGCCAGCTGCTTG
GAGACGCTTTCTCGAAGCAATGCAGTCCATAGAGATTCAACCTTCATAGG
TAGAGTCACATGTGCC back to topCoding sequence (CDS) from alignment at ch3:1054885..1058450- >KJC3_003139-T3 ID=KJC3_003139-T3|Name=KJC3_003139-T3|organism=Aspergillus niger KJC3|type=CDS|length=5805bp|location=Sequence derived from alignment at ch3:1054885..1058450- (Aspergillus niger KJC3)
ACAGTGCTCCATCCTCGATCCGTGATCAAGTCGCGGATCACGAATCTAAT
GCCGTGAAATACTACCTCAATGAGATAGTCGATTTTGATACAGCGGCAGC
GTTTCACAAACGCCCATCGAACAAGGTCGTTCAACGTGAGCTGAGATCAG
CGACCTTGCTGGCAGATAAAACCGCACCTATTGGATTGACGGCTACCCAG
GCTAAAAAAATCACTACAGACCCAGAGGTCCATCGTCTTCGAAGAGTCTG
TCGCGCATTGACTGCGGAAATTCGCAGCCAGGGCTATAAACGTGTGAAGG
ATGCCGCAGGCACCGAGATTGGTGAGCGGAAGAAACGTGCAGATGCCGAG
CTCAACAGTACACTTACGAAGCTCCGAGAGGAGGAGAAGGAGAGGAATCG
CCGAAGGCACTTTAGGAAGACAGACACGGCTATTTTCAACCAACAGTACG
AGCTCGATCGGACCTCTCCTGAGGCTAAACTACAGCCTCATGTGGCCCGG
ACCTACCAAATCCTCGAGCGCAAGGAGCTCGTTGATCTGCTCTGCTATTC
AACTCCTACCAAAACAGACGAAGAAGCTCATCTTCGACGGTTAAGGTACA
TCCGCCTTATGGTCCGATGGCAAGACCGGAAGGAGAGCCCTCGGCGGGGT
AAGCAGTCAGTGACCATATCAAAGCCCCAGGCAGCGAACCCTTCATCTGC
CTGTGTCGTCGAAAATTTCGACCCACTGCAATGTCCATTTTGCCTTTCGG
ACACGCGCCTCTCACCTGCTGACCGCACGAAGCGAAAGAGCAAAACAAAC
AAGCTCTGGGACCACGTGGAAAAGATTCATGAGCAAGAGCTTGCAGCATT
TGACTCGGGATTTCGCAAATGCGGACTATGTAGGCTGAAGGATATTGACT
TTGTGCCATCTAGCGTGTCCAATTTCAAGAACCACACCCACACCGTCCAT
GGAATCAGACTTAGACCCTAGGAAGAGATACGTTATCGAGCACGAGGATA
ATTTGATATTCGATGTGCTATCACAGCTTCTGGCGCTGGCAATACATGAT
GATATCTTCGAGGCTACTATTCAAGATGTGTCCCATATATACACAGTACC
AATTCCTGATCATCGAAAGGGCATCCAGCTGAAGATAAAGAGAGAAAAGC
TGGATGTATCGGTCTTCCGTGAGCCTGAACGTACTCCCCAGGGCTACAGG
ACATCTGATTCGTGCCCTATGAAGTCCAAGACCTGGAGCCGATATGTCAA
ACGGATTGGAGTGCGAAGTGGCCAGGAACGTAACCTTACACAGAAGGTGT
TCCGGCGCGGTGCAATTAATGCCATTAATAATGAATGTTGTCAGTTCGAG
AATGGCTTTGCGTAAGCACCCACTGCCAAAGCCGACGGGCCAGTCGGAGG
ATCTTTTGCAGTATCTTGTGTCCCATCTTGTGGATTGTGATTCGGTGTTC
GCGGACGAAAAGCAGCGTCTCTACGCCCTCTCGGGGCTCAATCTGTCCTG
CATCTCTGCCAGTCGAGCCGTATCTTTTTTTGATACGAGACACCGCCTTC
AATTTCAGGCGGACGGCACTTTGGTACCACCTGTAGACACGTCAGCTAAG
GTTAGAACGCCTTTGTCTTCCATCGAGGAGCCCCTGTGTGATCCAGGCAC
CAAAATCAACTTGCAAAACGACGATCATGCGGAAGGAGGCTCGACATCCG
AGACGAGCTCGTATTCTGACTCGGAAGTGGATACGGCGAGCGACAGCGAT
CACCAGTCGGACTGTTCCAGTGTCACAGATGACGGGTACCTTAACGGGAA
TGAGGAGACGGGCACTATTCTTTGGCGGCACGTGGAGTTCTACATTGTTC
GTAACCCAGTGCCTGGACGTCGCCATATCTTAGCCGCCATTGTGTCCATC
CTGCATACTAAAGGGGAAGGAAGGAAGTTTCGGCTACAGTGCTCCATCCT
CGATCCGTGATCAAGTCGCGGATCACGAATCTAATGCCGTGAAATACTAC
CTCAATGAGATAGTCGATTTTGATACAGCGGCAGCGTTTCACAAACGCCC
ATCGAACAAGGTCGTTCAACGTGAGCTGAGATCAGCGACCTTGCTGGCAG
ATAAAACCGCACCTATTGGATTGACGGCTACCCAGGCTAAAAAAATCACT
ACAGACCCAGAGGTCCATCGTCTTCGAAGAGTCTGTCGCGCATTGACTGC
GGAAATTCGCAGCCAGGGCTATAAACGTGTGAAGGATGCCGCAGGCACCG
AGATTGGTGAGCGGAAGAAACGTGCAGATGCCGAGCTCAACAGTACACTT
ACGAAGCTCCGAGAGGAGGAGAAGGAGAGGAATCGCCGAAGGCACTTTAG
GAAGACAGACACGGCTATTTTCAACCAACAGTACGAGCTCGATCGGACCT
CTCCTGAGGCTAAACTACAGCCTCATGTGGCCCGGACCTACCAAATCCTC
GAGCGCAAGGAGCTCGTTGATCTGCTCTGCTATTCAACTCCTACCAAAAC
AGACGAAGAAGCTCATCTTCGACGGTTAAGGTACATCCGCCTTATGGTCC
GATGGCAAGACCGGAAGGAGAGCCCTCGGCGGGGTAAGCAGTCAGTGACC
ATATCAAAGCCCCAGGCAGCGAACCCTTCATCTGCCTGTGTCGTCGAAAA
TTTCGACCCACTGCAATGTCCATTTTGCCTTTCGGACACGCGCCTCTCAC
CTGCTGACCGCACGAAGCGAAAGAGCAAAACAAACAAGCTCTGGGACCAC
GTGGAAAAGATTCATGAGCAAGAGCTTGCAGCATTTGACTCGGGATTTCG
CAAATGCGGACTATGTAGGCTGAAGGATATTGACTTTGTGCCATCTAGCG
TGTCCAATTTCAAGAACCACACCCACACCGTCCATGGAATCAGACTTAGA
CCCTAGGAAGAGATACGTTATCGAGCACGAGGATAATTTGATATTCGATG
TGCTATCACAGCTTCTGGCGCTGGCAATACATGATGATATCTTCGAGGCT
ACTATTCAAGATGTGTCCCATATATACACAGTACCAATTCCTGATCATCG
AAAGGGCATCCAGCTGAAGATAAAGAGAGAAAAGCTGGATGTATCGGTCT
TCCGTGAGCCTGAACGTACTCCCCAGGGCTACAGGACATCTGATTCGTGC
CCTATGAAGTCCAAGACCTGGAGCCGATATGTCAAACGGATTGGAGTGCG
AAGTGGCCAGGAACGTAACCTTACACAGAAGGTGTTCCGGCGCGGTGCAA
TTAATGCCATTAATAATGAATGTTGTCAGTTCGAGAATGGCTTTGCGTAA
GCACCCACTGCCAAAGCCGACGGGCCAGTCGGAGGATCTTTTGCAGTATC
TTGTGTCCCATCTTGTGGATTGTGATTCGGTGTTCGCGGACGAAAAGCAG
CGTCTCTACGCCCTCTCGGGGCTCAATCTGTCCTGCATCTCTGCCAGTCG
AGCCGTATCTTTTTTTGATACGAGACACCGCCTTCAATTTCAGGCGGACG
GCACTTTGGTACCACCTGTAGACACGTCAGCTAAGGTTAGAACGCCTTTG
TCTTCCATCGAGGAGCCCCTGTGTGATCCAGGCACCAAAATCAACTTGCA
AAACGACGATCATGCGGAAGGAGGCTCGACATCCGAGACGAGCTCGTATT
CTGACTCGGAAGTGGATACGGCGAGCGACAGCGATCACCAGTCGGACTGT
TCCAGTGTCACAGATGACGGGTACCTTAACGGGAATGAGGAGACGGGCAC
TATTCTTTGGCGGCACGTGGAGTTCTACATTGTTCGTAACCCAGTGCCTG
GACGTCGCCATATCTTAGCCGCCATTGTGTCCATCCTGCATACTAAAGGG
GAAGGAAGGAAGTTTCGGCTACAGTGCTCCATCCTCGATCCGTGATCAAG
TCGCGGATCACGAATCTAATGCCGTGAAATACTACCTCAATGAGATAGTC
GATTTTGATACAGCGGCAGCGTTTCACAAACGCCCATCGAACAAGGTCGT
TCAACGTGAGCTGAGATCAGCGACCTTGCTGGCAGATAAAACCGCACCTA
TTGGATTGACGGCTACCCAGGCTAAAAAAATCACTACAGACCCAGAGGTC
CATCGTCTTCGAAGAGTCTGTCGCGCATTGACTGCGGAAATTCGCAGCCA
GGGCTATAAACGTGTGAAGGATGCCGCAGGCACCGAGATTGGTGAGCGGA
AGAAACGTGCAGATGCCGAGCTCAACAGTACACTTACGAAGCTCCGAGAG
GAGGAGAAGGAGAGGAATCGCCGAAGGCACTTTAGGAAGACAGACACGGC
TATTTTCAACCAACAGTACGAGCTCGATCGGACCTCTCCTGAGGCTAAAC
TACAGCCTCATGTGGCCCGGACCTACCAAATCCTCGAGCGCAAGGAGCTC
GTTGATCTGCTCTGCTATTCAACTCCTACCAAAACAGACGAAGAAGCTCA
TCTTCGACGGTTAAGGTACATCCGCCTTATGGTCCGATGGCAAGACCGGA
AGGAGAGCCCTCGGCGGGGTAAGCAGTCAGTGACCATATCAAAGCCCCAG
GCAGCGAACCCTTCATCTGCCTGTGTCGTCGAAAATTTCGACCCACTGCA
ATGTCCATTTTGCCTTTCGGACACGCGCCTCTCACCTGCTGACCGCACGA
AGCGAAAGAGCAAAACAAACAAGCTCTGGGACCACGTGGAAAAGATTCAT
GAGCAAGAGCTTGCAGCATTTGACTCGGGATTTCGCAAATGCGGACTATG
TAGGCTGAAGGATATTGACTTTGTGCCATCTAGCGTGTCCAATTTCAAGA
ACCACACCCACACCGTCCATGGAATCAGACTTAGACCCTAGGAAGAGATA
CGTTATCGAGCACGAGGATAATTTGATATTCGATGTGCTATCACAGCTTC
TGGCGCTGGCAATACATGATGATATCTTCGAGGCTACTATTCAAGATGTG
TCCCATATATACACAGTACCAATTCCTGATCATCGAAAGGGCATCCAGCT
GAAGATAAAGAGAGAAAAGCTGGATGTATCGGTCTTCCGTGAGCCTGAAC
GTACTCCCCAGGGCTACAGGACATCTGATTCGTGCCCTATGAAGTCCAAG
ACCTGGAGCCGATATGTCAAACGGATTGGAGTGCGAAGTGGCCAGGAACG
TAACCTTACACAGAAGGTGTTCCGGCGCGGTGCAATTAATGCCATTAATA
ATGAATGTTGTCAGTTCGAGAATGGCTTTGCGTAAGCACCCACTGCCAAA
GCCGACGGGCCAGTCGGAGGATCTTTTGCAGTATCTTGTGTCCCATCTTG
TGGATTGTGATTCGGTGTTCGCGGACGAAAAGCAGCGTCTCTACGCCCTC
TCGGGGCTCAATCTGTCCTGCATCTCTGCCAGTCGAGCCGTATCTTTTTT
TGATACGAGACACCGCCTTCAATTTCAGGCGGACGGCACTTTGGTACCAC
CTGTAGACACGTCAGCTAAGGTTAGAACGCCTTTGTCTTCCATCGAGGAG
CCCCTGTGTGATCCAGGCACCAAAATCAACTTGCAAAACGACGATCATGC
GGAAGGAGGCTCGACATCCGAGACGAGCTCGTATTCTGACTCGGAAGTGG
ATACGGCGAGCGACAGCGATCACCAGTCGGACTGTTCCAGTGTCACAGAT
GACGGGTACCTTAACGGGAATGAGGAGACGGGCACTATTCTTTGGCGGCA
CGTGGAGTTCTACATTGTTCGTAACCCAGTGCCTGGACGTCGCCATATCT
TAGCCGCCATTGTGTCCATCCTGCATACTAAAGGGGAAGGAAGGAAGTTT
CGGCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003139-T3.utr3p1 | KJC3_003139-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021842 |
| DBxref | PFAM:PF11917 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1054885..1058450 - |
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