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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1120609..1122098- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003162-T1 ID=KJC3_003162-T1|Name=KJC3_003162-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1490bp|location=Sequence derived from alignment at ch3:1120609..1122098- (Aspergillus niger KJC3)
GCCACCTACCCCCGCATCCACCGCCACTCCGTATCCATATCCACAACAAT
CAAGACTTGATTACCATCAATCATATTCAATATAAGCTATGCCTACTTCC
ATCGAGTCTACCGTGAGCACACAGACCAAGAACCGCCCCACCGTCCGGCT
CGCGGCCGTTGACGGGAATGCCGAACAGGTTCGTTATAACCCCGCTCTGC
TTGCTGAAATACAAAGCATTTCGCTCACCACGCTTGCTACAGCATCCCGA
TTGGCTGGTCGAACTGCACACCAAGGGTTGGACGGTTGTGCGCGGAGCCC
TACCCAGGGACCGAGCACTGGCGTATGCCGACAAGGGCTACGAATGGCTT
GAAAGCTGGAATCTGGGGTTCGACCGCAAGGACCCGTCCACTCGCAAGAC
AGCAAATCTTCCCTGGCACACTCGGGGAGGGCTTTACAACGGGTTTGTCA
TGAACACGGGTATCATGGACAGCGTGGTTGTCAGCGGCAACACTAACACT
GCCGGGAGCATAGGTACGGCATCGGTCACGAGCAGTTCGTATGGGATTTG
AAGTCCGAACCGAGTCTTGTGGAGAAGTGGGAACAGATATGGGGCACCCG
CGAGCTGCTAGTGTCATTTGGTATGTTCTACCCATTCTCTGGTTATGAAA
ATATTACTGACTGCGCAGACGGGGTGAACCTTTCCTTACCCGAAAGGGAA
CGTCCCAAGTCAGACCCTATTTTCGCGCCGTGGGCGCATGTCGACCAGTC
CCCGTTTAACAACAAATTCGACACCGTTCAGGGAATTGTGAACCTGCTAC
CCAATGGGCCCGAGGACGGCGGTCTGATGGTGCTTGAAGGGTCAAGCGCC
TACTATACTGAGTTGTGGCAGCATTTTGACCACAAGAAGGGCGAAAAAGG
ATGGAGCACGTGGGCCTTTCAATATGTTGACGACGAGATGTGCCAATGGT
TAGAGGCGAAGGGGTGCAAATGGATCAAGGTGTGCGCAGAGCCGGGCGAC
CTGCTGCTCTGGGACTCGGTGCGTGCTCCTGTCTTCAAGATATCTTGATT
TCGTGGTTGGCTAACAGCGCACTAGCGCACGATCCATTACGGCGCCGCCC
CTTCTTCGGTTAATGACCGCTTCGCTGCCTGTATGACCAACCTTCATTCC
ATGTAGTATAGGGATGCTAACGGTTTGAACTAAGATGTCTGTTACAAGCC
GGCCGCTGCCATCTCAGAGGAGGCCAAAAAGGTCCGCCTGCAGGCGTTTG
AAGCGAAGCAGAACACAACGCATGATCCAGCTGATTTCCGAGCCAGGGAG
TACCTGCCGCCGGCGGATCATCCTACATACGAGATGGCCACCAAACGGTC
TCTACCGAGCCCAATGCTTTCGAAGCGGGCGAAGGAACTGATCGGGCTGG
ATCCTTACTGATGGGTTTATTACGATTAGAGGTTATTTTAGCTAGTAATT
CACAGTTATTATCTTGCTACAAACTGCACTGGAATGCCTA back to topCoding sequence (CDS) from alignment at ch3:1120609..1122098- >KJC3_003162-T1 ID=KJC3_003162-T1|Name=KJC3_003162-T1|organism=Aspergillus niger KJC3|type=CDS|length=6174bp|location=Sequence derived from alignment at ch3:1120609..1122098- (Aspergillus niger KJC3)
ATGTCTGTTACAAGCCGGCCGCTGCCATCTCAGAGGAGGCCAAAAAGGTC
CGCCTGCAGGCGTTTGAAGCGAAGCAGAACACAACGCATGATCCAGCTGA
TTTCCGAGCCAGGGAGTACCTGCCGCCGGCGGATCATCCTACATACGAGA
TGGCCACCAAACGGTCTCTACCGAGCCCAATGCTTTCGAAGCGGGCGAAG
GAACTGATCGGGCTGGATCCTTACTGACGCACGATCCATTACGGCGCCGC
CCCTTCTTCGGTTAATGACCGCTTCGCTGCCTACGGGGTGAACCTTTCCT
TACCCGAAAGGGAACGTCCCAAGTCAGACCCTATTTTCGCGCCGTGGGCG
CATGTCGACCAGTCCCCGTTTAACAACAAATTCGACACCGTTCAGGGAAT
TGTGAACCTGCTACCCAATGGGCCCGAGGACGGCGGTCTGATGGTGCTTG
AAGGGTCAAGCGCCTACTATACTGAGTTGTGGCAGCATTTTGACCACAAG
AAGGGCGAAAAAGGATGGAGCACGTGGGCCTTTCAATATGTTGACGACGA
GATGTGCCAATGGTTAGAGGCGAAGGGGTGCAAATGGATCAAGGTGTGCG
CAGAGCCGGGCGACCTGCTGCTCTGGGACTCGGTACGGCATCGGTCACGA
GCAGTTCGTATGGGATTTGAAGTCCGAACCGAGTCTTGTGGAGAAGTGGG
AACAGATATGGGGCACCCGCGAGCTGCTAGTGTCATTTGCATCCCGATTG
GCTGGTCGAACTGCACACCAAGGGTTGGACGGTTGTGCGCGGAGCCCTAC
CCAGGGACCGAGCACTGGCGTATGCCGACAAGGGCTACGAATGGCTTGAA
AGCTGGAATCTGGGGTTCGACCGCAAGGACCCGTCCACTCGCAAGACAGC
AAATCTTCCCTGGCACACTCGGGGAGGGCTTTACAACGGATGCCTACTTC
CATCGAGTCTACCGTGAGCACACAGACCAAGAACCGCCCCACCGTCCGGC
TCGCGGCCGTTGACGGGAATGCCGAACAGATGTCTGTTACAAGCCGGCCG
CTGCCATCTCAGAGGAGGCCAAAAAGGTCCGCCTGCAGGCGTTTGAAGCG
AAGCAGAACACAACGCATGATCCAGCTGATTTCCGAGCCAGGGAGTACCT
GCCGCCGGCGGATCATCCTACATACGAGATGGCCACCAAACGGTCTCTAC
CGAGCCCAATGCTTTCGAAGCGGGCGAAGGAACTGATCGGGCTGGATCCT
TACTGACGCACGATCCATTACGGCGCCGCCCCTTCTTCGGTTAATGACCG
CTTCGCTGCCTACGGGGTGAACCTTTCCTTACCCGAAAGGGAACGTCCCA
AGTCAGACCCTATTTTCGCGCCGTGGGCGCATGTCGACCAGTCCCCGTTT
AACAACAAATTCGACACCGTTCAGGGAATTGTGAACCTGCTACCCAATGG
GCCCGAGGACGGCGGTCTGATGGTGCTTGAAGGGTCAAGCGCCTACTATA
CTGAGTTGTGGCAGCATTTTGACCACAAGAAGGGCGAAAAAGGATGGAGC
ACGTGGGCCTTTCAATATGTTGACGACGAGATGTGCCAATGGTTAGAGGC
GAAGGGGTGCAAATGGATCAAGGTGTGCGCAGAGCCGGGCGACCTGCTGC
TCTGGGACTCGGTACGGCATCGGTCACGAGCAGTTCGTATGGGATTTGAA
GTCCGAACCGAGTCTTGTGGAGAAGTGGGAACAGATATGGGGCACCCGCG
AGCTGCTAGTGTCATTTGCATCCCGATTGGCTGGTCGAACTGCACACCAA
GGGTTGGACGGTTGTGCGCGGAGCCCTACCCAGGGACCGAGCACTGGCGT
ATGCCGACAAGGGCTACGAATGGCTTGAAAGCTGGAATCTGGGGTTCGAC
CGCAAGGACCCGTCCACTCGCAAGACAGCAAATCTTCCCTGGCACACTCG
GGGAGGGCTTTACAACGGATGCCTACTTCCATCGAGTCTACCGTGAGCAC
ACAGACCAAGAACCGCCCCACCGTCCGGCTCGCGGCCGTTGACGGGAATG
CCGAACAGATGTCTGTTACAAGCCGGCCGCTGCCATCTCAGAGGAGGCCA
AAAAGGTCCGCCTGCAGGCGTTTGAAGCGAAGCAGAACACAACGCATGAT
CCAGCTGATTTCCGAGCCAGGGAGTACCTGCCGCCGGCGGATCATCCTAC
ATACGAGATGGCCACCAAACGGTCTCTACCGAGCCCAATGCTTTCGAAGC
GGGCGAAGGAACTGATCGGGCTGGATCCTTACTGACGCACGATCCATTAC
GGCGCCGCCCCTTCTTCGGTTAATGACCGCTTCGCTGCCTACGGGGTGAA
CCTTTCCTTACCCGAAAGGGAACGTCCCAAGTCAGACCCTATTTTCGCGC
CGTGGGCGCATGTCGACCAGTCCCCGTTTAACAACAAATTCGACACCGTT
CAGGGAATTGTGAACCTGCTACCCAATGGGCCCGAGGACGGCGGTCTGAT
GGTGCTTGAAGGGTCAAGCGCCTACTATACTGAGTTGTGGCAGCATTTTG
ACCACAAGAAGGGCGAAAAAGGATGGAGCACGTGGGCCTTTCAATATGTT
GACGACGAGATGTGCCAATGGTTAGAGGCGAAGGGGTGCAAATGGATCAA
GGTGTGCGCAGAGCCGGGCGACCTGCTGCTCTGGGACTCGGTACGGCATC
GGTCACGAGCAGTTCGTATGGGATTTGAAGTCCGAACCGAGTCTTGTGGA
GAAGTGGGAACAGATATGGGGCACCCGCGAGCTGCTAGTGTCATTTGCAT
CCCGATTGGCTGGTCGAACTGCACACCAAGGGTTGGACGGTTGTGCGCGG
AGCCCTACCCAGGGACCGAGCACTGGCGTATGCCGACAAGGGCTACGAAT
GGCTTGAAAGCTGGAATCTGGGGTTCGACCGCAAGGACCCGTCCACTCGC
AAGACAGCAAATCTTCCCTGGCACACTCGGGGAGGGCTTTACAACGGATG
CCTACTTCCATCGAGTCTACCGTGAGCACACAGACCAAGAACCGCCCCAC
CGTCCGGCTCGCGGCCGTTGACGGGAATGCCGAACAGATGTCTGTTACAA
GCCGGCCGCTGCCATCTCAGAGGAGGCCAAAAAGGTCCGCCTGCAGGCGT
TTGAAGCGAAGCAGAACACAACGCATGATCCAGCTGATTTCCGAGCCAGG
GAGTACCTGCCGCCGGCGGATCATCCTACATACGAGATGGCCACCAAACG
GTCTCTACCGAGCCCAATGCTTTCGAAGCGGGCGAAGGAACTGATCGGGC
TGGATCCTTACTGACGCACGATCCATTACGGCGCCGCCCCTTCTTCGGTT
AATGACCGCTTCGCTGCCTACGGGGTGAACCTTTCCTTACCCGAAAGGGA
ACGTCCCAAGTCAGACCCTATTTTCGCGCCGTGGGCGCATGTCGACCAGT
CCCCGTTTAACAACAAATTCGACACCGTTCAGGGAATTGTGAACCTGCTA
CCCAATGGGCCCGAGGACGGCGGTCTGATGGTGCTTGAAGGGTCAAGCGC
CTACTATACTGAGTTGTGGCAGCATTTTGACCACAAGAAGGGCGAAAAAG
GATGGAGCACGTGGGCCTTTCAATATGTTGACGACGAGATGTGCCAATGG
TTAGAGGCGAAGGGGTGCAAATGGATCAAGGTGTGCGCAGAGCCGGGCGA
CCTGCTGCTCTGGGACTCGGTACGGCATCGGTCACGAGCAGTTCGTATGG
GATTTGAAGTCCGAACCGAGTCTTGTGGAGAAGTGGGAACAGATATGGGG
CACCCGCGAGCTGCTAGTGTCATTTGCATCCCGATTGGCTGGTCGAACTG
CACACCAAGGGTTGGACGGTTGTGCGCGGAGCCCTACCCAGGGACCGAGC
ACTGGCGTATGCCGACAAGGGCTACGAATGGCTTGAAAGCTGGAATCTGG
GGTTCGACCGCAAGGACCCGTCCACTCGCAAGACAGCAAATCTTCCCTGG
CACACTCGGGGAGGGCTTTACAACGGATGCCTACTTCCATCGAGTCTACC
GTGAGCACACAGACCAAGAACCGCCCCACCGTCCGGCTCGCGGCCGTTGA
CGGGAATGCCGAACAGATGTCTGTTACAAGCCGGCCGCTGCCATCTCAGA
GGAGGCCAAAAAGGTCCGCCTGCAGGCGTTTGAAGCGAAGCAGAACACAA
CGCATGATCCAGCTGATTTCCGAGCCAGGGAGTACCTGCCGCCGGCGGAT
CATCCTACATACGAGATGGCCACCAAACGGTCTCTACCGAGCCCAATGCT
TTCGAAGCGGGCGAAGGAACTGATCGGGCTGGATCCTTACTGACGCACGA
TCCATTACGGCGCCGCCCCTTCTTCGGTTAATGACCGCTTCGCTGCCTAC
GGGGTGAACCTTTCCTTACCCGAAAGGGAACGTCCCAAGTCAGACCCTAT
TTTCGCGCCGTGGGCGCATGTCGACCAGTCCCCGTTTAACAACAAATTCG
ACACCGTTCAGGGAATTGTGAACCTGCTACCCAATGGGCCCGAGGACGGC
GGTCTGATGGTGCTTGAAGGGTCAAGCGCCTACTATACTGAGTTGTGGCA
GCATTTTGACCACAAGAAGGGCGAAAAAGGATGGAGCACGTGGGCCTTTC
AATATGTTGACGACGAGATGTGCCAATGGTTAGAGGCGAAGGGGTGCAAA
TGGATCAAGGTGTGCGCAGAGCCGGGCGACCTGCTGCTCTGGGACTCGGT
ACGGCATCGGTCACGAGCAGTTCGTATGGGATTTGAAGTCCGAACCGAGT
CTTGTGGAGAAGTGGGAACAGATATGGGGCACCCGCGAGCTGCTAGTGTC
ATTTGCATCCCGATTGGCTGGTCGAACTGCACACCAAGGGTTGGACGGTT
GTGCGCGGAGCCCTACCCAGGGACCGAGCACTGGCGTATGCCGACAAGGG
CTACGAATGGCTTGAAAGCTGGAATCTGGGGTTCGACCGCAAGGACCCGT
CCACTCGCAAGACAGCAAATCTTCCCTGGCACACTCGGGGAGGGCTTTAC
AACGGATGCCTACTTCCATCGAGTCTACCGTGAGCACACAGACCAAGAAC
CGCCCCACCGTCCGGCTCGCGGCCGTTGACGGGAATGCCGAACAGATGTC
TGTTACAAGCCGGCCGCTGCCATCTCAGAGGAGGCCAAAAAGGTCCGCCT
GCAGGCGTTTGAAGCGAAGCAGAACACAACGCATGATCCAGCTGATTTCC
GAGCCAGGGAGTACCTGCCGCCGGCGGATCATCCTACATACGAGATGGCC
ACCAAACGGTCTCTACCGAGCCCAATGCTTTCGAAGCGGGCGAAGGAACT
GATCGGGCTGGATCCTTACTGACGCACGATCCATTACGGCGCCGCCCCTT
CTTCGGTTAATGACCGCTTCGCTGCCTACGGGGTGAACCTTTCCTTACCC
GAAAGGGAACGTCCCAAGTCAGACCCTATTTTCGCGCCGTGGGCGCATGT
CGACCAGTCCCCGTTTAACAACAAATTCGACACCGTTCAGGGAATTGTGA
ACCTGCTACCCAATGGGCCCGAGGACGGCGGTCTGATGGTGCTTGAAGGG
TCAAGCGCCTACTATACTGAGTTGTGGCAGCATTTTGACCACAAGAAGGG
CGAAAAAGGATGGAGCACGTGGGCCTTTCAATATGTTGACGACGAGATGT
GCCAATGGTTAGAGGCGAAGGGGTGCAAATGGATCAAGGTGTGCGCAGAG
CCGGGCGACCTGCTGCTCTGGGACTCGGTACGGCATCGGTCACGAGCAGT
TCGTATGGGATTTGAAGTCCGAACCGAGTCTTGTGGAGAAGTGGGAACAG
ATATGGGGCACCCGCGAGCTGCTAGTGTCATTTGCATCCCGATTGGCTGG
TCGAACTGCACACCAAGGGTTGGACGGTTGTGCGCGGAGCCCTACCCAGG
GACCGAGCACTGGCGTATGCCGACAAGGGCTACGAATGGCTTGAAAGCTG
GAATCTGGGGTTCGACCGCAAGGACCCGTCCACTCGCAAGACAGCAAATC
TTCCCTGGCACACTCGGGGAGGGCTTTACAACGGATGCCTACTTCCATCG
AGTCTACCGTGAGCACACAGACCAAGAACCGCCCCACCGTCCGGCTCGCG
GCCGTTGACGGGAATGCCGAACAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003162-T1.utr3p1 | KJC3_003162-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003162-T1.utr5p1 | KJC3_003162-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008775 |
| DBxref | PFAM:PF05721 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1120609..1122098 - |
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