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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1131561..1132500- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003165-T1 ID=KJC3_003165-T1|Name=KJC3_003165-T1|organism=Aspergillus niger KJC3|type=mRNA|length=940bp|location=Sequence derived from alignment at ch3:1131561..1132500- (Aspergillus niger KJC3)
GACTACCTTCGCCATGCAGACCAAACCCCTTTCAATAAAAGCCATCTGGC
ATCTCGTTCTTCTGCTGTTGGCCACCTCGGCAACAGCAGCCCCATACCAA
ACCCGTATCCTCGAGACCGGGACCACCTTTGTCTCTCCAGACCCTTACGG
CCCATGGTCCTTGACTCCCTCCTTTGCCAACAAACCGGGGCCAGACCTGG
GCTACATCAAAACCAGTAACACTGGCACCGGCAAGGTGGAAGTCCACCTT
GCCTCCAGGGCTTCCAACTACCAGACCCGCACGCTGGAGCTTGGGACGAC
CTTCTGGCCTGAAGACAATGGCGTCTGGCAGCTGATCGACGCAGACGGTG
ACGGTCGAGATGACCTCGTCTACATCAAGACCCGGAACACTGGCAGCGGC
CGAGTGGAAGTGCACATTGCCTCGGCGGCGTCCAACTTCCAGACCCGTAT
CAAGGAAGTCGGCACGACTTTCTTGCCCGAAGATAACGGGACCTGGCAGA
TGGCCGATTTTGACGGCGATGGCATCCTCGACCTGATCTACATCAAGACT
CGGAATACCGGGACGGGACGGGTGGAGGTGCATGTCACCTCTGGCGCATC
CAACTACCAGACTCGCGTGCAGGAAGTCGGCACGACTTTCTTGCCCGAAG
ATAACGGGACCTGGCAGATGGCCGATTTTGGCGGTGATGGCATCCTCGAC
CTCATCTATATCAAGACTCGGAATACCGGGGCCGGACGGGTGGAGGTCCA
TGTTGCGTCGGGGGCGTCGACCTATCAGACCCGTGTCCAGGAGGTGGGCA
GCACGTTCTTTCCCGAGGACAATGGGTTTTGGCAGATGATTGATTTCGAT
AAGGATGGAGTGCTAGATTTGGCGTATATCAAGACGCAGAATACGGGGAC
CGGACGAATTGAGGTCCACGTTGCAACAGGCAGAAACTGA back to topCoding sequence (CDS) from alignment at ch3:1131561..1132500- >KJC3_003165-T1 ID=KJC3_003165-T1|Name=KJC3_003165-T1|organism=Aspergillus niger KJC3|type=CDS|length=927bp|location=Sequence derived from alignment at ch3:1131561..1132500- (Aspergillus niger KJC3)
ATGCAGACCAAACCCCTTTCAATAAAAGCCATCTGGCATCTCGTTCTTCT
GCTGTTGGCCACCTCGGCAACAGCAGCCCCATACCAAACCCGTATCCTCG
AGACCGGGACCACCTTTGTCTCTCCAGACCCTTACGGCCCATGGTCCTTG
ACTCCCTCCTTTGCCAACAAACCGGGGCCAGACCTGGGCTACATCAAAAC
CAGTAACACTGGCACCGGCAAGGTGGAAGTCCACCTTGCCTCCAGGGCTT
CCAACTACCAGACCCGCACGCTGGAGCTTGGGACGACCTTCTGGCCTGAA
GACAATGGCGTCTGGCAGCTGATCGACGCAGACGGTGACGGTCGAGATGA
CCTCGTCTACATCAAGACCCGGAACACTGGCAGCGGCCGAGTGGAAGTGC
ACATTGCCTCGGCGGCGTCCAACTTCCAGACCCGTATCAAGGAAGTCGGC
ACGACTTTCTTGCCCGAAGATAACGGGACCTGGCAGATGGCCGATTTTGA
CGGCGATGGCATCCTCGACCTGATCTACATCAAGACTCGGAATACCGGGA
CGGGACGGGTGGAGGTGCATGTCACCTCTGGCGCATCCAACTACCAGACT
CGCGTGCAGGAAGTCGGCACGACTTTCTTGCCCGAAGATAACGGGACCTG
GCAGATGGCCGATTTTGGCGGTGATGGCATCCTCGACCTCATCTATATCA
AGACTCGGAATACCGGGGCCGGACGGGTGGAGGTCCATGTTGCGTCGGGG
GCGTCGACCTATCAGACCCGTGTCCAGGAGGTGGGCAGCACGTTCTTTCC
CGAGGACAATGGGTTTTGGCAGATGATTGATTTCGATAAGGATGGAGTGC
TAGATTTGGCGTATATCAAGACGCAGAATACGGGGACCGGACGAATTGAG
GTCCACGTTGCAACAGGCAGAAACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003165-T1.utr5p1 | KJC3_003165-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-25) |
| DBxref | PFAM:PF13517 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1131561..1132500 - |
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