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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1142519..1144581+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003169-T1 ID=KJC3_003169-T1|Name=KJC3_003169-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2063bp|location=Sequence derived from alignment at ch3:1142519..1144581+ (Aspergillus niger KJC3)
GCAGATACAGACTTACTCCAACCTGAATTCCGGGAATTCATCATACAGTG
CATCGACTTTACCTAAGGTTAATGTACCCATCCTTGAAGATGCTGAGAAG
ATCTGAGACTGATCAATGTGCTCTCAGCACGCATCATGCGCTCACCCTGG
CCTATCGCAGCCACTGCAATGCTGCTGCCTTTGGTGGCAGCTGACTGGCA
GTTTAAATCGCGCCCCGACTTGGCACCGCCCAAGTTGAACATTACTATCC
CTGCAGCCGCGGATGTAGAGAAGGGATACCTCTTTGTTGCTCCTTTTGCT
GGTATCGCAGATGGCCCCGGAGAGATGCACGGCCCTCGCCAGGCTTCTCC
TTACATCTTTCGGGATGATGGTGAGCTGGTCTGGTCTGGTTACTCCTACT
ACTCCATCTGGGCTACAAACTTTCAGAAAGCCCGATGGAAGGGCAAGGAT
GTCCTCTTCTGCTTCGAGGGTGATCATAACCCGGCTTATGGGCATGGTCA
TGGTCATGTCACAATCCTGGATCAGCACTACGAGACCATTCGTGAGCTGC
GTGCTGGTAACCATAAGATTATGGACAAGCATGAGTTCCACGTCATCAAT
GAGGAGACGGCATTGATACAGATTTACCAGCCTGTGCCAATGGACCTCAC
TCCCTGGGGAGCCAGTGCGGAGCAACAGTGGATTGTGGATGCTATTATCC
AAGGTAAGGATTTCATTCACATGAGAAGTATAAAGCTAACTGTATCGGCA
GAGCTTGACATTGCAACTGGTGATGTTCTGTTTGAGTGGTCCAGCTTGGA
TCATGTCCTTCCCGACGGTGGGTCTTCCTTTTCCACAGCACCCGCATGCA
ACCAACTAAACTTTCACAGAGGCAATCCTCCCCATAAATCCTGGCCAGGC
TGGGGCAGGCTATAATTCTTCAGATGCTTGGGACTACTTCCACATCAACT
CCGTTGACAAAGACACGGACGGTAACTACCTGATCTCCGCCCGCGATGCT
TGCGCCGTGCACAAAATCAACGGCAGCACCGGTGAGATCATCTGGCGCCT
GGGAGGAGTCAAGTCAGACTTCGAACTAGGACCCAACGTCAAGTTCTGCT
TCCAACATCACGCTCGGTTTGTTTCCAAAGACGGTGACTCTGAGGTCATA
TCCTTGTATGACAACTCCGCCCACGGCACCGAGAACGGTCGCGGCCACGA
AGTCCACACCCACCCATTCTCACAAGGAAAGATCATCAAAGTCAATACTG
CTACCTGGAAAGCATTCATCGTCCAAGCCTTCCAGCCACCCGATGGTCTA
TTGTCCAAGTCTCAAGGAGGCACCCAATTGCTACCCAACGGCAACGTCCT
CGTGAACTGGGGCTCAGAGGGTGCATTGACTGAATTTCGCCCTGACGGCA
CTCCGATTCTACACGCCTACATGGACTCGGGTTTTCTGGGTGAGGGCGTC
GAGAATTACCGTGCTTTCCGGTATAACTGGACCGGACTTCCTAATGAGAC
GCCAGCCATCGTATCATTGCAGAACGATGAAGGTACAGCCCTGTATGTCT
CCTGGAACGGTGACACTGAGACGAAGTTCTGGCGCTTTTATAGCGTGGTT
GACGAGTACGGCTCGCGCGAGTTCTTGGGTGATGCGAAGCGAACTGGATT
TGAGACTGCGCTGTCGCTTCCAGGTCGTGTGATTCATGCTGTGTCTGCGG
AGGCTATTGATTCCAGGGGAAGGGTTCTGACGACTACTGGTTCAGTGAGA
ACTAAGGCTGAAGTGCTACCTCCTAAGGCAGCTTCGGTTGGACAACACGA
GCACGGGGCCGCGCAATCCCAAATCCAAATTGGAGCAACTAGTCATTGGG
AGGAGTATATGATCTTGAAGTTGGATCGTTTCTATCGCGGATGAGGGTAT
GCAAAGCACCGGTTGGGGTTCTCCCGTGAAGGTCAAGCGTCGTGCGGGAG
GTGCCTGTTCGTCCAACCCATGGTACCTAGTGGCAAGTGCTTTTAGTGGC
AGCGTTGGAGCGGGGGATCCTATTTCAGGGTAATATTTATGATAGTAGCC
TAGGAGATAGCAG back to topCoding sequence (CDS) from alignment at ch3:1142519..1144581+ >KJC3_003169-T1 ID=KJC3_003169-T1|Name=KJC3_003169-T1|organism=Aspergillus niger KJC3|type=CDS|length=4977bp|location=Sequence derived from alignment at ch3:1142519..1144581+ (Aspergillus niger KJC3)
ATGCGCTCACCCTGGCCTATCGCAGCCACTGCAATGCTGCTGCCTTTGGT
GGCAGCTGACTGGCAGTTTAAATCGCGCCCCGACTTGGCACCGCCCAAGT
TGAACATTACTATCCCTGCAGCCGCGGATGTAGAGAAGGGATACCTCTTT
GTTGCTCCTTTTGCTGGTATCGCAGATGGCCCCGGAGAGATGCACGGCCC
TCGCCAGGCTTCTCCTTACATCTTTCGGGATGATGGTGAGCTGGTCTGGT
CTGGTTACTCCTACTACTCCATCTGGGCTACAAACTTTCAGAAAGCCCGA
TGGAAGGGCAAGGATGTCCTCTTCTGCTTCGAGGGTGATCATAACCCGGC
TTATGGGCATGGTCATGGTCATGTCACAATCCTGGATCAGCACTACGAGA
CCATTCGTGAGCTGCGTGCTGGTAACCATAAGATTATGGACAAGCATGAG
TTCCACGTCATCAATGAGGAGACGGCATTGATACAGATTTACCAGCCTGT
GCCAATGGACCTCACTCCCTGGGGAGCCAGTGCGGAGCAACAGTGGATTG
TGGATGCTATTATCCAAGAGCTTGACATTGCAACTGGTGATGTTCTGTTT
GAGTGGTCCAGCTTGGATCATGTCCTTCCCGACGAGGCAATCCTCCCCAT
AAATCCTGGCCAGGCTGGGGCAGGCTATAATTCTTCAGATGCTTGGGACT
ACTTCCACATCAACTCCGTTGACAAAGACACGGACGGTAACTACCTGATC
TCCGCCCGCGATGCTTGCGCCGTGCACAAAATCAACGGCAGCACCGGTGA
GATCATCTGGCGCCTGGGAGGAGTCAAGTCAGACTTCGAACTAGGACCCA
ACGTCAAGTTCTGCTTCCAACATCACGCTCGGTTTGTTTCCAAAGACGGT
GACTCTGAGGTCATATCCTTGTATGACAACTCCGCCCACGGCACCGAGAA
CGGTCGCGGCCACGAAGTCCACACCCACCCATTCTCACAAGGAAAGATCA
TCAAAGTCAATACTGCTACCTGGAAAGCATTCATCGTCCAAGCCTTCCAG
CCACCCGATGGTCTATTGTCCAAGTCTCAAGGAGGCACCCAATTGCTACC
CAACGGCAACGTCCTCGTGAACTGGGGCTCAGAGGGTGCATTGACTGAAT
TTCGCCCTGACGGCACTCCGATTCTACACGCCTACATGGACTCGGGTTTT
CTGGGTGAGGGCGTCGAGAATTACCGTGCTTTCCGGTATAACTGGACCGG
ACTTCCTAATGAGACGCCAGCCATCGTATCATTGCAGAACGATGAAGGTA
CAGCCCTGTATGTCTCCTGGAACGGTGACACTGAGACGAAGTTCTGGCGC
TTTTATAGCGTGGTTGACGAGTACGGCTCGCGCGAGTTCTTGGGTGATGC
GAAGCGAACTGGATTTGAGACTGCGCTGTCGCTTCCAGGTCGTGTGATTC
ATGCTGTGTCTGCGGAGGCTATTGATTCCAGGGGAAGGGTTCTGACGACT
ACTGGTTCAGTGAGAACTAAGGCTGAAGTGCTACCTCCTAAGGCAGCTTC
GGTTGGACAACACGAGCACGGGGCCGCGCAATCCCAAATCCAAATTGGAG
CAACTAGTCATTGGGAGGAGTATATGATCTTGAAGTTGGATCGTTTCTAT
CGCGGATGAATGCGCTCACCCTGGCCTATCGCAGCCACTGCAATGCTGCT
GCCTTTGGTGGCAGCTGACTGGCAGTTTAAATCGCGCCCCGACTTGGCAC
CGCCCAAGTTGAACATTACTATCCCTGCAGCCGCGGATGTAGAGAAGGGA
TACCTCTTTGTTGCTCCTTTTGCTGGTATCGCAGATGGCCCCGGAGAGAT
GCACGGCCCTCGCCAGGCTTCTCCTTACATCTTTCGGGATGATGGTGAGC
TGGTCTGGTCTGGTTACTCCTACTACTCCATCTGGGCTACAAACTTTCAG
AAAGCCCGATGGAAGGGCAAGGATGTCCTCTTCTGCTTCGAGGGTGATCA
TAACCCGGCTTATGGGCATGGTCATGGTCATGTCACAATCCTGGATCAGC
ACTACGAGACCATTCGTGAGCTGCGTGCTGGTAACCATAAGATTATGGAC
AAGCATGAGTTCCACGTCATCAATGAGGAGACGGCATTGATACAGATTTA
CCAGCCTGTGCCAATGGACCTCACTCCCTGGGGAGCCAGTGCGGAGCAAC
AGTGGATTGTGGATGCTATTATCCAAGAGCTTGACATTGCAACTGGTGAT
GTTCTGTTTGAGTGGTCCAGCTTGGATCATGTCCTTCCCGACGAGGCAAT
CCTCCCCATAAATCCTGGCCAGGCTGGGGCAGGCTATAATTCTTCAGATG
CTTGGGACTACTTCCACATCAACTCCGTTGACAAAGACACGGACGGTAAC
TACCTGATCTCCGCCCGCGATGCTTGCGCCGTGCACAAAATCAACGGCAG
CACCGGTGAGATCATCTGGCGCCTGGGAGGAGTCAAGTCAGACTTCGAAC
TAGGACCCAACGTCAAGTTCTGCTTCCAACATCACGCTCGGTTTGTTTCC
AAAGACGGTGACTCTGAGGTCATATCCTTGTATGACAACTCCGCCCACGG
CACCGAGAACGGTCGCGGCCACGAAGTCCACACCCACCCATTCTCACAAG
GAAAGATCATCAAAGTCAATACTGCTACCTGGAAAGCATTCATCGTCCAA
GCCTTCCAGCCACCCGATGGTCTATTGTCCAAGTCTCAAGGAGGCACCCA
ATTGCTACCCAACGGCAACGTCCTCGTGAACTGGGGCTCAGAGGGTGCAT
TGACTGAATTTCGCCCTGACGGCACTCCGATTCTACACGCCTACATGGAC
TCGGGTTTTCTGGGTGAGGGCGTCGAGAATTACCGTGCTTTCCGGTATAA
CTGGACCGGACTTCCTAATGAGACGCCAGCCATCGTATCATTGCAGAACG
ATGAAGGTACAGCCCTGTATGTCTCCTGGAACGGTGACACTGAGACGAAG
TTCTGGCGCTTTTATAGCGTGGTTGACGAGTACGGCTCGCGCGAGTTCTT
GGGTGATGCGAAGCGAACTGGATTTGAGACTGCGCTGTCGCTTCCAGGTC
GTGTGATTCATGCTGTGTCTGCGGAGGCTATTGATTCCAGGGGAAGGGTT
CTGACGACTACTGGTTCAGTGAGAACTAAGGCTGAAGTGCTACCTCCTAA
GGCAGCTTCGGTTGGACAACACGAGCACGGGGCCGCGCAATCCCAAATCC
AAATTGGAGCAACTAGTCATTGGGAGGAGTATATGATCTTGAAGTTGGAT
CGTTTCTATCGCGGATGAATGCGCTCACCCTGGCCTATCGCAGCCACTGC
AATGCTGCTGCCTTTGGTGGCAGCTGACTGGCAGTTTAAATCGCGCCCCG
ACTTGGCACCGCCCAAGTTGAACATTACTATCCCTGCAGCCGCGGATGTA
GAGAAGGGATACCTCTTTGTTGCTCCTTTTGCTGGTATCGCAGATGGCCC
CGGAGAGATGCACGGCCCTCGCCAGGCTTCTCCTTACATCTTTCGGGATG
ATGGTGAGCTGGTCTGGTCTGGTTACTCCTACTACTCCATCTGGGCTACA
AACTTTCAGAAAGCCCGATGGAAGGGCAAGGATGTCCTCTTCTGCTTCGA
GGGTGATCATAACCCGGCTTATGGGCATGGTCATGGTCATGTCACAATCC
TGGATCAGCACTACGAGACCATTCGTGAGCTGCGTGCTGGTAACCATAAG
ATTATGGACAAGCATGAGTTCCACGTCATCAATGAGGAGACGGCATTGAT
ACAGATTTACCAGCCTGTGCCAATGGACCTCACTCCCTGGGGAGCCAGTG
CGGAGCAACAGTGGATTGTGGATGCTATTATCCAAGAGCTTGACATTGCA
ACTGGTGATGTTCTGTTTGAGTGGTCCAGCTTGGATCATGTCCTTCCCGA
CGAGGCAATCCTCCCCATAAATCCTGGCCAGGCTGGGGCAGGCTATAATT
CTTCAGATGCTTGGGACTACTTCCACATCAACTCCGTTGACAAAGACACG
GACGGTAACTACCTGATCTCCGCCCGCGATGCTTGCGCCGTGCACAAAAT
CAACGGCAGCACCGGTGAGATCATCTGGCGCCTGGGAGGAGTCAAGTCAG
ACTTCGAACTAGGACCCAACGTCAAGTTCTGCTTCCAACATCACGCTCGG
TTTGTTTCCAAAGACGGTGACTCTGAGGTCATATCCTTGTATGACAACTC
CGCCCACGGCACCGAGAACGGTCGCGGCCACGAAGTCCACACCCACCCAT
TCTCACAAGGAAAGATCATCAAAGTCAATACTGCTACCTGGAAAGCATTC
ATCGTCCAAGCCTTCCAGCCACCCGATGGTCTATTGTCCAAGTCTCAAGG
AGGCACCCAATTGCTACCCAACGGCAACGTCCTCGTGAACTGGGGCTCAG
AGGGTGCATTGACTGAATTTCGCCCTGACGGCACTCCGATTCTACACGCC
TACATGGACTCGGGTTTTCTGGGTGAGGGCGTCGAGAATTACCGTGCTTT
CCGGTATAACTGGACCGGACTTCCTAATGAGACGCCAGCCATCGTATCAT
TGCAGAACGATGAAGGTACAGCCCTGTATGTCTCCTGGAACGGTGACACT
GAGACGAAGTTCTGGCGCTTTTATAGCGTGGTTGACGAGTACGGCTCGCG
CGAGTTCTTGGGTGATGCGAAGCGAACTGGATTTGAGACTGCGCTGTCGC
TTCCAGGTCGTGTGATTCATGCTGTGTCTGCGGAGGCTATTGATTCCAGG
GGAAGGGTTCTGACGACTACTGGTTCAGTGAGAACTAAGGCTGAAGTGCT
ACCTCCTAAGGCAGCTTCGGTTGGACAACACGAGCACGGGGCCGCGCAAT
CCCAAATCCAAATTGGAGCAACTAGTCATTGGGAGGAGTATATGATCTTG
AAGTTGGATCGTTTCTATCGCGGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003169-T1.utr5p1 | KJC3_003169-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003169-T1.utr3p1 | KJC3_003169-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR011047 |
| DBxref | InterPro:IPR039535 |
| DBxref | PFAM:PF14269 |
| DBxref | PFAM:PF05935 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1142519..1144581 + |
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