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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1376545..1378301- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003236-T1 ID=KJC3_003236-T1|Name=KJC3_003236-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1757bp|location=Sequence derived from alignment at ch3:1376545..1378301- (Aspergillus niger KJC3)
ATCATCATGTCGCTCGGTGCTGGGGTCGGTGATATTCTGGCCTGCGCAAG
TCTTGCTTATAAGATTTACCAGGAGCTGTCTGAAATGAACGGTGTCTCTG
AAGAATATCAAGCTCTGACATCGAAGCTTCTTATTGTCCACAAACTCCTA
CTTCAAGTGGAAAAGCTCAGAGCGTCTAATCAGCTCGCTCAGTCAACCTT
GAATGCCATTCGCTTCTTGACGAGCCGGATGGGTGAGGCAATTGGCGAGT
TTTCAACCAAATTAGAAAAAGATAGTCGAGCATCTCAAGCTGGAGAATAT
GGAATAGCTTTGAAGAATATCTTCTCAAAGGGTAAATCATCTTTGGCAAT
GACATATGAGGTTAGTTTATCTGGTATATGCTGTTGACTTCCACTAAGAA
TATCTAATATGACATAGGCTCCGAGGCTATCTAGCATCCTCCATTCTAAC
TTGTTGTCTCTGAGTAGCCTTTTGCGAATGGCTTGCTATTCCATGTAGGT
TGTGTCTATGGTCGAGAGGCGAATTACTCATACTTCTCCCAGCTCTGACG
ATAAATCTCGGTATAATGCAAGTTATACTCCGAGATGGATCGATGAAAGG
TCTGGATTTCCGAATGTCAGACTAAGCGCAATTATCACAAGAAGGGAGAC
ATGTTGTGCAAGACCTAGTTAGTACTGGTACAGACTGCGATGTATACCAG
CTAATATACTTCCCAGATTTTGAAAAAGTGCCTAGTCCTACTACCTTCTT
CAGACCTGGGCGGGTATTTACGGTAGCCATACGAGGTATATTAACAGCCA
CGGGAGATGAAGACATTGACTACACACATCTCCCCTTGGAATGGACCCCA
TTAGACTCCATTCTAGACCCGTCTGGACGTGAGAAGGAACGAATTTTCCG
ACAGAAGAGGAATTACGAGGCGGTTATAAAGCTTCCCTTAGCAGCAATGT
TCCAATATGGCGACGTGCAGAAGAATGGACAAGTTCAATGTCATCTGTGC
CCAAGCGACGTTCAATTTCCAAAGGACTTTTGGGTTGATAGACACTTCAG
GATGTATCACCACGAGACGTTTAGAAGACTGGACGATGTATCAAGTCTTG
ACGAAAGAAGTGACTATATTTGTCCAAATGAGATAAGCACCAGTCGTCCT
ATTCTGTCTGAGCCAGAAGTTGAAGAATTGACCGCCAACGAATATAACCT
TCCCACCTGGGGTATGGATGCCTGGGTAGGAGCCATTACCCTGCGCCGTT
TCGTGGTCGTCCAGCAGGGTACTAAATCCTGCCTCTGTCTGGGTATACAT
ACGTGAGATCCCCTCGTCTTTAGAGGCTCTGGTAATTCCATACCGTTGTT
GACGAACATCGATTCACAGTTACTCTGGAAGAGGGTGTTCCGATCAACCT
GATCAGGAGCTGTTTGCCATACTCCACTCGTTGAAGTACGTCCCCGATCC
ATTGCCAGAAGAAACGAGAATGGGCATCCAGCCTTTACGCCTAAAGCCTG
AGCATCCATCAACTGTATTACCCAGCACCGCCCGTATTCACTTCGGCCGC
GTCTATGAGATCAAGCACGATGTGGAGCTGAAGAACATTGGCCTGATCCA
TAGCTCATCCATGAATATACTCTCGTCACAATTCGAATCTCATTGTCCGA
TAGATACTCCGAATGGTCTAGGAGCTTCACAGGACAAGGATCAAGCAGGT
ACATCCGCAGATGACACAGTCCACAGGCCGGTGTCAGGATTTAGAAATGA
GCTGTGA back to topCoding sequence (CDS) from alignment at ch3:1376545..1378301- >KJC3_003236-T1 ID=KJC3_003236-T1|Name=KJC3_003236-T1|organism=Aspergillus niger KJC3|type=CDS|length=5988bp|location=Sequence derived from alignment at ch3:1376545..1378301- (Aspergillus niger KJC3)
TTACTCTGGAAGAGGGTGTTCCGATCAACCTGATCAGGAGCTGTTTGCCA
TACTCCACTCGTTGAAGTACGTCCCCGATCCATTGCCAGAAGAAACGAGA
ATGGGCATCCAGCCTTTACGCCTAAAGCCTGAGCATCCATCAACTGTATT
ACCCAGCACCGCCCGTATTCACTTCGGCCGCGTCTATGAGATCAAGCACG
ATGTGGAGCTGAAGAACATTGGCCTGATCCATAGCTCATCCATGAATATA
CTCTCGTCACAATTCGAATCTCATTGTCCGATAGATACTCCGAATGGTCT
AGGAGCTTCACAGGACAAGGATCAAGCAGGTACATCCGCAGATGACACAG
TCCACAGGCCGGTGTCAGGATTTAGAAATGAGCTGTGAATTTTGAAAAAG
TGCCTAGTCCTACTACCTTCTTCAGACCTGGGCGGGTATTTACGGTAGCC
ATACGAGGTATATTAACAGCCACGGGAGATGAAGACATTGACTACACACA
TCTCCCCTTGGAATGGACCCCATTAGACTCCATTCTAGACCCGTCTGGAC
GTGAGAAGGAACGAATTTTCCGACAGAAGAGGAATTACGAGGCGGTTATA
AAGCTTCCCTTAGCAGCAATGTTCCAATATGGCGACGTGCAGAAGAATGG
ACAAGTTCAATGTCATCTGTGCCCAAGCGACGTTCAATTTCCAAAGGACT
TTTGGGTTGATAGACACTTCAGGATGTATCACCACGAGACGTTTAGAAGA
CTGGACGATGTATCAAGTCTTGACGAAAGAAGTGACTATATTTGTCCAAA
TGAGATAAGCACCAGTCGTCCTATTCTGTCTGAGCCAGAAGTTGAAGAAT
TGACCGCCAACGAATATAACCTTCCCACCTGGGGTATGGATGCCTGGGTA
GGAGCCATTACCCTGCGCCGTTTCGTGGTCGTCCAGCAGGGTACTAAATC
CTGCCTCTGTCTGGGTATACATACGTTGTGTCTATGGTCGAGAGGCGAAT
TACTCATACTTCTCCCAGCTCTGACGATAAATCTCGGTATAATGCAAGTT
ATACTCCGAGATGGATCGATGAAAGGTCTGGATTTCCGAATGTCAGACTA
AGCGCAATTATCACAAGAAGGGAGACATGTTGTGCAAGACCTAATGTCGC
TCGGTGCTGGGGTCGGTGATATTCTGGCCTGCGCAAGTCTTGCTTATAAG
ATTTACCAGGAGCTGTCTGAAATGAACGGTGTCTCTGAAGAATATCAAGC
TCTGACATCGAAGCTTCTTATTGTCCACAAACTCCTACTTCAAGTGGAAA
AGCTCAGAGCGTCTAATCAGCTCGCTCAGTCAACCTTGAATGCCATTCGC
TTCTTGACGAGCCGGATGGGTGAGGCAATTGGCGAGTTTTCAACCAAATT
AGAAAAAGATAGTCGAGCATCTCAAGCTGGAGAATATGGAATAGCTTTGA
AGAATATCTTCTCAAAGGGTAAATCATCTTTGGCAATGACATATGAGTTA
CTCTGGAAGAGGGTGTTCCGATCAACCTGATCAGGAGCTGTTTGCCATAC
TCCACTCGTTGAAGTACGTCCCCGATCCATTGCCAGAAGAAACGAGAATG
GGCATCCAGCCTTTACGCCTAAAGCCTGAGCATCCATCAACTGTATTACC
CAGCACCGCCCGTATTCACTTCGGCCGCGTCTATGAGATCAAGCACGATG
TGGAGCTGAAGAACATTGGCCTGATCCATAGCTCATCCATGAATATACTC
TCGTCACAATTCGAATCTCATTGTCCGATAGATACTCCGAATGGTCTAGG
AGCTTCACAGGACAAGGATCAAGCAGGTACATCCGCAGATGACACAGTCC
ACAGGCCGGTGTCAGGATTTAGAAATGAGCTGTGAATTTTGAAAAAGTGC
CTAGTCCTACTACCTTCTTCAGACCTGGGCGGGTATTTACGGTAGCCATA
CGAGGTATATTAACAGCCACGGGAGATGAAGACATTGACTACACACATCT
CCCCTTGGAATGGACCCCATTAGACTCCATTCTAGACCCGTCTGGACGTG
AGAAGGAACGAATTTTCCGACAGAAGAGGAATTACGAGGCGGTTATAAAG
CTTCCCTTAGCAGCAATGTTCCAATATGGCGACGTGCAGAAGAATGGACA
AGTTCAATGTCATCTGTGCCCAAGCGACGTTCAATTTCCAAAGGACTTTT
GGGTTGATAGACACTTCAGGATGTATCACCACGAGACGTTTAGAAGACTG
GACGATGTATCAAGTCTTGACGAAAGAAGTGACTATATTTGTCCAAATGA
GATAAGCACCAGTCGTCCTATTCTGTCTGAGCCAGAAGTTGAAGAATTGA
CCGCCAACGAATATAACCTTCCCACCTGGGGTATGGATGCCTGGGTAGGA
GCCATTACCCTGCGCCGTTTCGTGGTCGTCCAGCAGGGTACTAAATCCTG
CCTCTGTCTGGGTATACATACGTTGTGTCTATGGTCGAGAGGCGAATTAC
TCATACTTCTCCCAGCTCTGACGATAAATCTCGGTATAATGCAAGTTATA
CTCCGAGATGGATCGATGAAAGGTCTGGATTTCCGAATGTCAGACTAAGC
GCAATTATCACAAGAAGGGAGACATGTTGTGCAAGACCTAATGTCGCTCG
GTGCTGGGGTCGGTGATATTCTGGCCTGCGCAAGTCTTGCTTATAAGATT
TACCAGGAGCTGTCTGAAATGAACGGTGTCTCTGAAGAATATCAAGCTCT
GACATCGAAGCTTCTTATTGTCCACAAACTCCTACTTCAAGTGGAAAAGC
TCAGAGCGTCTAATCAGCTCGCTCAGTCAACCTTGAATGCCATTCGCTTC
TTGACGAGCCGGATGGGTGAGGCAATTGGCGAGTTTTCAACCAAATTAGA
AAAAGATAGTCGAGCATCTCAAGCTGGAGAATATGGAATAGCTTTGAAGA
ATATCTTCTCAAAGGGTAAATCATCTTTGGCAATGACATATGAGTTACTC
TGGAAGAGGGTGTTCCGATCAACCTGATCAGGAGCTGTTTGCCATACTCC
ACTCGTTGAAGTACGTCCCCGATCCATTGCCAGAAGAAACGAGAATGGGC
ATCCAGCCTTTACGCCTAAAGCCTGAGCATCCATCAACTGTATTACCCAG
CACCGCCCGTATTCACTTCGGCCGCGTCTATGAGATCAAGCACGATGTGG
AGCTGAAGAACATTGGCCTGATCCATAGCTCATCCATGAATATACTCTCG
TCACAATTCGAATCTCATTGTCCGATAGATACTCCGAATGGTCTAGGAGC
TTCACAGGACAAGGATCAAGCAGGTACATCCGCAGATGACACAGTCCACA
GGCCGGTGTCAGGATTTAGAAATGAGCTGTGAATTTTGAAAAAGTGCCTA
GTCCTACTACCTTCTTCAGACCTGGGCGGGTATTTACGGTAGCCATACGA
GGTATATTAACAGCCACGGGAGATGAAGACATTGACTACACACATCTCCC
CTTGGAATGGACCCCATTAGACTCCATTCTAGACCCGTCTGGACGTGAGA
AGGAACGAATTTTCCGACAGAAGAGGAATTACGAGGCGGTTATAAAGCTT
CCCTTAGCAGCAATGTTCCAATATGGCGACGTGCAGAAGAATGGACAAGT
TCAATGTCATCTGTGCCCAAGCGACGTTCAATTTCCAAAGGACTTTTGGG
TTGATAGACACTTCAGGATGTATCACCACGAGACGTTTAGAAGACTGGAC
GATGTATCAAGTCTTGACGAAAGAAGTGACTATATTTGTCCAAATGAGAT
AAGCACCAGTCGTCCTATTCTGTCTGAGCCAGAAGTTGAAGAATTGACCG
CCAACGAATATAACCTTCCCACCTGGGGTATGGATGCCTGGGTAGGAGCC
ATTACCCTGCGCCGTTTCGTGGTCGTCCAGCAGGGTACTAAATCCTGCCT
CTGTCTGGGTATACATACGTTGTGTCTATGGTCGAGAGGCGAATTACTCA
TACTTCTCCCAGCTCTGACGATAAATCTCGGTATAATGCAAGTTATACTC
CGAGATGGATCGATGAAAGGTCTGGATTTCCGAATGTCAGACTAAGCGCA
ATTATCACAAGAAGGGAGACATGTTGTGCAAGACCTAATGTCGCTCGGTG
CTGGGGTCGGTGATATTCTGGCCTGCGCAAGTCTTGCTTATAAGATTTAC
CAGGAGCTGTCTGAAATGAACGGTGTCTCTGAAGAATATCAAGCTCTGAC
ATCGAAGCTTCTTATTGTCCACAAACTCCTACTTCAAGTGGAAAAGCTCA
GAGCGTCTAATCAGCTCGCTCAGTCAACCTTGAATGCCATTCGCTTCTTG
ACGAGCCGGATGGGTGAGGCAATTGGCGAGTTTTCAACCAAATTAGAAAA
AGATAGTCGAGCATCTCAAGCTGGAGAATATGGAATAGCTTTGAAGAATA
TCTTCTCAAAGGGTAAATCATCTTTGGCAATGACATATGAGTTACTCTGG
AAGAGGGTGTTCCGATCAACCTGATCAGGAGCTGTTTGCCATACTCCACT
CGTTGAAGTACGTCCCCGATCCATTGCCAGAAGAAACGAGAATGGGCATC
CAGCCTTTACGCCTAAAGCCTGAGCATCCATCAACTGTATTACCCAGCAC
CGCCCGTATTCACTTCGGCCGCGTCTATGAGATCAAGCACGATGTGGAGC
TGAAGAACATTGGCCTGATCCATAGCTCATCCATGAATATACTCTCGTCA
CAATTCGAATCTCATTGTCCGATAGATACTCCGAATGGTCTAGGAGCTTC
ACAGGACAAGGATCAAGCAGGTACATCCGCAGATGACACAGTCCACAGGC
CGGTGTCAGGATTTAGAAATGAGCTGTGAATTTTGAAAAAGTGCCTAGTC
CTACTACCTTCTTCAGACCTGGGCGGGTATTTACGGTAGCCATACGAGGT
ATATTAACAGCCACGGGAGATGAAGACATTGACTACACACATCTCCCCTT
GGAATGGACCCCATTAGACTCCATTCTAGACCCGTCTGGACGTGAGAAGG
AACGAATTTTCCGACAGAAGAGGAATTACGAGGCGGTTATAAAGCTTCCC
TTAGCAGCAATGTTCCAATATGGCGACGTGCAGAAGAATGGACAAGTTCA
ATGTCATCTGTGCCCAAGCGACGTTCAATTTCCAAAGGACTTTTGGGTTG
ATAGACACTTCAGGATGTATCACCACGAGACGTTTAGAAGACTGGACGAT
GTATCAAGTCTTGACGAAAGAAGTGACTATATTTGTCCAAATGAGATAAG
CACCAGTCGTCCTATTCTGTCTGAGCCAGAAGTTGAAGAATTGACCGCCA
ACGAATATAACCTTCCCACCTGGGGTATGGATGCCTGGGTAGGAGCCATT
ACCCTGCGCCGTTTCGTGGTCGTCCAGCAGGGTACTAAATCCTGCCTCTG
TCTGGGTATACATACGTTGTGTCTATGGTCGAGAGGCGAATTACTCATAC
TTCTCCCAGCTCTGACGATAAATCTCGGTATAATGCAAGTTATACTCCGA
GATGGATCGATGAAAGGTCTGGATTTCCGAATGTCAGACTAAGCGCAATT
ATCACAAGAAGGGAGACATGTTGTGCAAGACCTAATGTCGCTCGGTGCTG
GGGTCGGTGATATTCTGGCCTGCGCAAGTCTTGCTTATAAGATTTACCAG
GAGCTGTCTGAAATGAACGGTGTCTCTGAAGAATATCAAGCTCTGACATC
GAAGCTTCTTATTGTCCACAAACTCCTACTTCAAGTGGAAAAGCTCAGAG
CGTCTAATCAGCTCGCTCAGTCAACCTTGAATGCCATTCGCTTCTTGACG
AGCCGGATGGGTGAGGCAATTGGCGAGTTTTCAACCAAATTAGAAAAAGA
TAGTCGAGCATCTCAAGCTGGAGAATATGGAATAGCTTTGAAGAATATCT
TCTCAAAGGGTAAATCATCTTTGGCAATGACATATGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003236-T1.utr5p1 | KJC3_003236-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1376545..1378301 - |
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