You are here

Home

KJC3_003245-T1, KJC3_003245-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003245-T1
Unique NameKJC3_003245-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1395815..1397658-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003245-T1 ID=KJC3_003245-T1|Name=KJC3_003245-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1844bp|location=Sequence derived from alignment at ch3:1395815..1397658- (Aspergillus niger KJC3)
ATGGATGCTGCCAACGTTCAGAAGCAGCAGGGACCGTTTGCTGAACTGAA
ACCATTCAAAGTCACGCAGACAGAGGGAAACGGTTCCGCTAGAAGCAAAG
ACAGTACACTCGTCGACTCTGCGCGAGCTACCTCCCCTCACTCACAGACG
GTCGAAGCAAAGCATGAGCCCAAAACACCCAGCTCGATACATAGCCATGG
AAATGCGGAACCTGAGCCGGAATATCCCACTTCGTGGAGACTCGCGCTGA
TCGTGATTGGGCTCTGTCTTTCGATCTTCTGCATGGCTTTGGTGAGTATT
CCAAGTACATACGCAAGCGATCGTGCTAATGGCATCAGGACAACACCATT
CTGGCGACTGCAATCCCCAAAATCACAGACCAATTCCAGTCACTCGGTGA
CGTGGGTTGGTACGGCAGTTCCTACCTCCTTACAACGTGCTGCCTCATCC
TGGCCTTTGGCAAGCTGTACACTTTCTACTCCACCAAATGGGTCTATCTG
ATGGGGCTCGCGATCTTCGAGATTGGTTCTCTGATCTGCGGAGTGGCTCC
CAACTCGGTTGCGCTGATTATCGGACGGGCGATAGCTGGCCTTGGGGCCG
CCGGAGTTTTCTCGGGAGCCATGATCATTATCTCGCAGACTGCACCGCTC
AAATGGAGGCCTTTCCTTACCGGTTCTATCACCTCCATGTATGGAATTGC
CAGCGTAGCAGGGCCCCTGATGGGTGGTGCGTTCACAGATCATGTCAGCT
GGCGATGGTGTTTCTATATCAACCTTCCAATTGGCGGCGCGACCATCTTC
TTCATCCTGATATTCTTCAAGGCACCCAAATCAGTCAAGAGTACCACGGG
GCTTAAGGATAAGCTGTCGCAGTTTGACCTGCCTGGTACATTTGTCTTTT
TGCCAGGAGTCATCTGCGTCCTGCTCGCACTGCAATGGGGCGGGACCACT
TACGAATGGGGGAATGGTCGCATCATCGCCCTGCTGGTGTTGTTCGGGGT
CCTCATCGGTATATTCATAGTGCTACAAATGTGGGGTAACGAGAAAGCCA
CGATCGCTCCGCGACTTATCAAGAATCGAAACGTATGGGGCGCTGCACTG
TTCAGCTTCTGCGTTGGCGGTTCATTTTTCGTGGCTGTCTATTACGTGCG
TGACCCTCCTTTCAAATTCCTTTAGAAACCTGCTAACATCCACCAGCTCC
CCATCTGGTTCCAAGCCATCAAAGGTGTTAGTGCCACCAAATCCGGCATC
ATGAACCTCCCCATGTTGCTCAGCGTCGTCATCTTCTCCATCGTAGCAGG
CGGCCTGGTCTCCACATTCGGATACTACACCCCATTCATGCTGATAGCCC
CAGCTTTCGTAGCCGTCGGCGGCGGCCTTCTCTCCACTATGGGCGTGCAC
TCCTCGGCGGGCCACTGGATCGGATACCAGATCATCTTCGGCGTGGGCGC
AGGCCTGGGCATGCAACAGCCGATGATGGTGGTGCAGGCGGCGCTGAAAA
TCGCCGATGTGCCCAGCGCGACGGCTATCGTGGCGTTCACGCAGACACTA
GGAGGAGCATTGTTCGTCTCCGTGGCGCAGAACGTCTTCCAGAATGAACT
GCGCAAGAACCTGTCACAGATATCGGGCGTTGATCCTGCTTCTGTCATGC
AGGCTGGGGCAACGATGCTACGACATGTCGTATCTGCGGACCAGCTGCCC
GCCGTGCTGGAGGCATATAATGGAGCCGTGACCACGACGTTCTATGTAGC
GGTAGCTATGGGAGCATTGAGTATCTTTGGGGCGTTGCCTATTCAGTGGA
TTTCTGTGAAGGGGAAGAAGATGGGACCGCCGGCAGCAGCATAA
back to top

Coding sequence (CDS) from alignment at ch3:1395815..1397658-

>KJC3_003245-T1 ID=KJC3_003245-T1|Name=KJC3_003245-T1|organism=Aspergillus niger KJC3|type=CDS|length=5238bp|location=Sequence derived from alignment at ch3:1395815..1397658- (Aspergillus niger KJC3)
CTCCCCATCTGGTTCCAAGCCATCAAAGGTGTTAGTGCCACCAAATCCGG
CATCATGAACCTCCCCATGTTGCTCAGCGTCGTCATCTTCTCCATCGTAG
CAGGCGGCCTGGTCTCCACATTCGGATACTACACCCCATTCATGCTGATA
GCCCCAGCTTTCGTAGCCGTCGGCGGCGGCCTTCTCTCCACTATGGGCGT
GCACTCCTCGGCGGGCCACTGGATCGGATACCAGATCATCTTCGGCGTGG
GCGCAGGCCTGGGCATGCAACAGCCGATGATGGTGGTGCAGGCGGCGCTG
AAAATCGCCGATGTGCCCAGCGCGACGGCTATCGTGGCGTTCACGCAGAC
ACTAGGAGGAGCATTGTTCGTCTCCGTGGCGCAGAACGTCTTCCAGAATG
AACTGCGCAAGAACCTGTCACAGATATCGGGCGTTGATCCTGCTTCTGTC
ATGCAGGCTGGGGCAACGATGCTACGACATGTCGTATCTGCGGACCAGCT
GCCCGCCGTGCTGGAGGCATATAATGGAGCCGTGACCACGACGTTCTATG
TAGCGGTAGCTATGGGAGCATTGAGTATCTTTGGGGCGTTGCCTATTCAG
TGGATTTCTGTGAAGGGGAAGAAGATGGGACCGCCGGCAGCAGCATAAGA
CAACACCATTCTGGCGACTGCAATCCCCAAAATCACAGACCAATTCCAGT
CACTCGGTGACGTGGGTTGGTACGGCAGTTCCTACCTCCTTACAACGTGC
TGCCTCATCCTGGCCTTTGGCAAGCTGTACACTTTCTACTCCACCAAATG
GGTCTATCTGATGGGGCTCGCGATCTTCGAGATTGGTTCTCTGATCTGCG
GAGTGGCTCCCAACTCGGTTGCGCTGATTATCGGACGGGCGATAGCTGGC
CTTGGGGCCGCCGGAGTTTTCTCGGGAGCCATGATCATTATCTCGCAGAC
TGCACCGCTCAAATGGAGGCCTTTCCTTACCGGTTCTATCACCTCCATGT
ATGGAATTGCCAGCGTAGCAGGGCCCCTGATGGGTGGTGCGTTCACAGAT
CATGTCAGCTGGCGATGGTGTTTCTATATCAACCTTCCAATTGGCGGCGC
GACCATCTTCTTCATCCTGATATTCTTCAAGGCACCCAAATCAGTCAAGA
GTACCACGGGGCTTAAGGATAAGCTGTCGCAGTTTGACCTGCCTGGTACA
TTTGTCTTTTTGCCAGGAGTCATCTGCGTCCTGCTCGCACTGCAATGGGG
CGGGACCACTTACGAATGGGGGAATGGTCGCATCATCGCCCTGCTGGTGT
TGTTCGGGGTCCTCATCGGTATATTCATAGTGCTACAAATGTGGGGTAAC
GAGAAAGCCACGATCGCTCCGCGACTTATCAAGAATCGAAACGTATGGGG
CGCTGCACTGTTCAGCTTCTGCGTTGGCGGTTCATTTTTCGTGGCTGTCT
ATTACATGGATGCTGCCAACGTTCAGAAGCAGCAGGGACCGTTTGCTGAA
CTGAAACCATTCAAAGTCACGCAGACAGAGGGAAACGGTTCCGCTAGAAG
CAAAGACAGTACACTCGTCGACTCTGCGCGAGCTACCTCCCCTCACTCAC
AGACGGTCGAAGCAAAGCATGAGCCCAAAACACCCAGCTCGATACATAGC
CATGGAAATGCGGAACCTGAGCCGGAATATCCCACTTCGTGGAGACTCGC
GCTGATCGTGATTGGGCTCTGTCTTTCGATCTTCTGCATGGCTTTGCTCC
CCATCTGGTTCCAAGCCATCAAAGGTGTTAGTGCCACCAAATCCGGCATC
ATGAACCTCCCCATGTTGCTCAGCGTCGTCATCTTCTCCATCGTAGCAGG
CGGCCTGGTCTCCACATTCGGATACTACACCCCATTCATGCTGATAGCCC
CAGCTTTCGTAGCCGTCGGCGGCGGCCTTCTCTCCACTATGGGCGTGCAC
TCCTCGGCGGGCCACTGGATCGGATACCAGATCATCTTCGGCGTGGGCGC
AGGCCTGGGCATGCAACAGCCGATGATGGTGGTGCAGGCGGCGCTGAAAA
TCGCCGATGTGCCCAGCGCGACGGCTATCGTGGCGTTCACGCAGACACTA
GGAGGAGCATTGTTCGTCTCCGTGGCGCAGAACGTCTTCCAGAATGAACT
GCGCAAGAACCTGTCACAGATATCGGGCGTTGATCCTGCTTCTGTCATGC
AGGCTGGGGCAACGATGCTACGACATGTCGTATCTGCGGACCAGCTGCCC
GCCGTGCTGGAGGCATATAATGGAGCCGTGACCACGACGTTCTATGTAGC
GGTAGCTATGGGAGCATTGAGTATCTTTGGGGCGTTGCCTATTCAGTGGA
TTTCTGTGAAGGGGAAGAAGATGGGACCGCCGGCAGCAGCATAAGACAAC
ACCATTCTGGCGACTGCAATCCCCAAAATCACAGACCAATTCCAGTCACT
CGGTGACGTGGGTTGGTACGGCAGTTCCTACCTCCTTACAACGTGCTGCC
TCATCCTGGCCTTTGGCAAGCTGTACACTTTCTACTCCACCAAATGGGTC
TATCTGATGGGGCTCGCGATCTTCGAGATTGGTTCTCTGATCTGCGGAGT
GGCTCCCAACTCGGTTGCGCTGATTATCGGACGGGCGATAGCTGGCCTTG
GGGCCGCCGGAGTTTTCTCGGGAGCCATGATCATTATCTCGCAGACTGCA
CCGCTCAAATGGAGGCCTTTCCTTACCGGTTCTATCACCTCCATGTATGG
AATTGCCAGCGTAGCAGGGCCCCTGATGGGTGGTGCGTTCACAGATCATG
TCAGCTGGCGATGGTGTTTCTATATCAACCTTCCAATTGGCGGCGCGACC
ATCTTCTTCATCCTGATATTCTTCAAGGCACCCAAATCAGTCAAGAGTAC
CACGGGGCTTAAGGATAAGCTGTCGCAGTTTGACCTGCCTGGTACATTTG
TCTTTTTGCCAGGAGTCATCTGCGTCCTGCTCGCACTGCAATGGGGCGGG
ACCACTTACGAATGGGGGAATGGTCGCATCATCGCCCTGCTGGTGTTGTT
CGGGGTCCTCATCGGTATATTCATAGTGCTACAAATGTGGGGTAACGAGA
AAGCCACGATCGCTCCGCGACTTATCAAGAATCGAAACGTATGGGGCGCT
GCACTGTTCAGCTTCTGCGTTGGCGGTTCATTTTTCGTGGCTGTCTATTA
CATGGATGCTGCCAACGTTCAGAAGCAGCAGGGACCGTTTGCTGAACTGA
AACCATTCAAAGTCACGCAGACAGAGGGAAACGGTTCCGCTAGAAGCAAA
GACAGTACACTCGTCGACTCTGCGCGAGCTACCTCCCCTCACTCACAGAC
GGTCGAAGCAAAGCATGAGCCCAAAACACCCAGCTCGATACATAGCCATG
GAAATGCGGAACCTGAGCCGGAATATCCCACTTCGTGGAGACTCGCGCTG
ATCGTGATTGGGCTCTGTCTTTCGATCTTCTGCATGGCTTTGCTCCCCAT
CTGGTTCCAAGCCATCAAAGGTGTTAGTGCCACCAAATCCGGCATCATGA
ACCTCCCCATGTTGCTCAGCGTCGTCATCTTCTCCATCGTAGCAGGCGGC
CTGGTCTCCACATTCGGATACTACACCCCATTCATGCTGATAGCCCCAGC
TTTCGTAGCCGTCGGCGGCGGCCTTCTCTCCACTATGGGCGTGCACTCCT
CGGCGGGCCACTGGATCGGATACCAGATCATCTTCGGCGTGGGCGCAGGC
CTGGGCATGCAACAGCCGATGATGGTGGTGCAGGCGGCGCTGAAAATCGC
CGATGTGCCCAGCGCGACGGCTATCGTGGCGTTCACGCAGACACTAGGAG
GAGCATTGTTCGTCTCCGTGGCGCAGAACGTCTTCCAGAATGAACTGCGC
AAGAACCTGTCACAGATATCGGGCGTTGATCCTGCTTCTGTCATGCAGGC
TGGGGCAACGATGCTACGACATGTCGTATCTGCGGACCAGCTGCCCGCCG
TGCTGGAGGCATATAATGGAGCCGTGACCACGACGTTCTATGTAGCGGTA
GCTATGGGAGCATTGAGTATCTTTGGGGCGTTGCCTATTCAGTGGATTTC
TGTGAAGGGGAAGAAGATGGGACCGCCGGCAGCAGCATAAGACAACACCA
TTCTGGCGACTGCAATCCCCAAAATCACAGACCAATTCCAGTCACTCGGT
GACGTGGGTTGGTACGGCAGTTCCTACCTCCTTACAACGTGCTGCCTCAT
CCTGGCCTTTGGCAAGCTGTACACTTTCTACTCCACCAAATGGGTCTATC
TGATGGGGCTCGCGATCTTCGAGATTGGTTCTCTGATCTGCGGAGTGGCT
CCCAACTCGGTTGCGCTGATTATCGGACGGGCGATAGCTGGCCTTGGGGC
CGCCGGAGTTTTCTCGGGAGCCATGATCATTATCTCGCAGACTGCACCGC
TCAAATGGAGGCCTTTCCTTACCGGTTCTATCACCTCCATGTATGGAATT
GCCAGCGTAGCAGGGCCCCTGATGGGTGGTGCGTTCACAGATCATGTCAG
CTGGCGATGGTGTTTCTATATCAACCTTCCAATTGGCGGCGCGACCATCT
TCTTCATCCTGATATTCTTCAAGGCACCCAAATCAGTCAAGAGTACCACG
GGGCTTAAGGATAAGCTGTCGCAGTTTGACCTGCCTGGTACATTTGTCTT
TTTGCCAGGAGTCATCTGCGTCCTGCTCGCACTGCAATGGGGCGGGACCA
CTTACGAATGGGGGAATGGTCGCATCATCGCCCTGCTGGTGTTGTTCGGG
GTCCTCATCGGTATATTCATAGTGCTACAAATGTGGGGTAACGAGAAAGC
CACGATCGCTCCGCGACTTATCAAGAATCGAAACGTATGGGGCGCTGCAC
TGTTCAGCTTCTGCGTTGGCGGTTCATTTTTCGTGGCTGTCTATTACATG
GATGCTGCCAACGTTCAGAAGCAGCAGGGACCGTTTGCTGAACTGAAACC
ATTCAAAGTCACGCAGACAGAGGGAAACGGTTCCGCTAGAAGCAAAGACA
GTACACTCGTCGACTCTGCGCGAGCTACCTCCCCTCACTCACAGACGGTC
GAAGCAAAGCATGAGCCCAAAACACCCAGCTCGATACATAGCCATGGAAA
TGCGGAACCTGAGCCGGAATATCCCACTTCGTGGAGACTCGCGCTGATCG
TGATTGGGCTCTGTCTTTCGATCTTCTGCATGGCTTTG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003245KJC3_003245Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003245-T1KJC3_003245-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003245-T1.cdsKJC3_003245-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003245-T1.exon3KJC3_003245-T1.exon3Aspergillus niger KJC3exon
KJC3_003245-T1.exon2KJC3_003245-T1.exon2Aspergillus niger KJC3exon
KJC3_003245-T1.exon1KJC3_003245-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1395815..1397658 -
Powered by Drupal