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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1403436..1406460- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003248-T1 ID=KJC3_003248-T1|Name=KJC3_003248-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3025bp|location=Sequence derived from alignment at ch3:1403436..1406460- (Aspergillus niger KJC3)
CCATTCCATCATTCCAGACCCGGATCTTCTGCAGGGATCTTTAAAGCTTT
ATTCAACTCCAATCCCCCTCTCCTACAGTTTTAAATATATTAGATTCTGT
TCTACCCCTCGACATTTCCTTCGCACAAACACAACACAACCGGCCATCAT
GGCCTCCCATCCTGCGAAGCGCAAACCTGCTGCTCCCAACAACAATTTCT
CCGCCGCCGCCGCCCGCAAACGCCAAAAAACATTTGATGCGCGCTCGCTC
GCCGTGCAGGCCGCCGACGCGGCACTATCTGCCTCCGGCGAACTAGATGT
CGCTGCGTACGTGGAAGCAAGGGAATACGAGATCCGATCGCTCGAGTCGG
GGATCCAGCGATCGAAGAATGCGTTGACGAGTCGGGCGTTCCAGAAGGTG
CCGAGGTCTTTGAGGAGACGGACTGCGAGTCATAATGTGAAGAGGGTACC
GAAGAGATTGAGGGCGAGGGCGAAAAGAGAGGTATATTCTCCCTTTCGAC
AATTATTGGGGGTTTGGTGGTATGCAAGAACAAGAAGATTCTAATGTATG
ATTCTGTGTCCAGATGATAGAAGACAACACCCCCACGGTATCATCACGAA
CCCGCAAACCCACCGAACAAATGCGCATTCGGCTCGAAACCGCCCGCCGA
CTACAGAACCTGAACGCGAAGACGAAAGCCAAGCGCACGGCCCTGAAAGA
TCAGCGAGATAAAGAGGTCCGGAAGACGTTGGAAGAATCAGGTAGTCATG
CGTATGACATTGCGCCCCGGGTGCCCAAAATCAAGAAGAATAAACTGTCG
AGGCCGAATCCGCCGGAAGCCAGGTTCAAGAAACGCCAGCAGTGCAAGAC
TTGGTTGCCGACGCATATGTTTCATGCCAAGAGGGCGCATATGGCTACTT
CTAAGGATCCGTTGTGGCGGTTTGCGGTGCCGTTGTCGCCTACGGAGAAG
AGCTATCGGCCTACGCATCGGGCGAGGGGGTCGAGGGGCGCGGTGGCGTG
GGATATGAGCTATCTGGCTACAGTTCAGTTGGAGGGGACGGTGGGGGCGA
TTGAGGGGGTGTTGAGGGCTGTTGGAGTTGAGGGGGAAAAGGCGTGGGGT
GTTAAAGGGAGGAAGTGGAGGGGTGGCACGAGGGGTTTGCGTGCTTGGGC
ATATGAGTGGGAGGGTGAGAGGAGGCCGATTGCGCCGGTTACGTTGGTTT
GGTGTGCTGAGGTGAAAGGAGAGGATGTGGAGATGGTGGATGCTGATGAA
AGTGGGACGCAGAGGAAGGGAAAGAAGGACTGGAGGAAGGTGTTTGTTCG
AGTGCATCCGTCTGCGTTTTTGCAGTTGTGGAATGCCCTCCTGGGTGTCT
CGAAGAAGCAGAACCCTCCTGTTATGGTCGAGGATTTGCGGTTCGAGATT
GGCAGTATCGAAATTACTGGTCCCGGCGCAACGGAGGCATTGCTCGCGTC
GTTCAAGCCGGTTGCTATGGATGGGAAGGATATTGCTGAGGATAGTCCGG
AGGCTATTTGGACTTCGCTCCTTGGGGTAACGAACCCTGCATCTCTGCCG
CAGGACGCAGTCCTTGGGTTCTCTGTCTCCGACCCTCGCCTCGAATTTCC
GCCCAAGACTCTGAAGCCGTCGTCGTCAGAGGATGAGATGCAACGGCTGG
CTATACTACTTTCGTCGTGGTCGCCAGACAACACGCAGACAGCCCCTGCT
CTCTTCGATCGTCGCACCCGTCTAGCTGCCGCACGCCAGCTGCCTAGCCA
AAAGGCTATCAATCGGCGTCGTTCCGAAGCTGGTCCTGGTGTACGCCCGC
CCGCCAAAGATACCGACCCCAAGGTACCTGTGATGGTTCTCGCCAGTCGA
CCTGCTCACTCCAAGAGCAGCAGCGCCCCTGGAACCTGGACTGTCCTTCT
CCCATGGAAGTGTGTGCTTCCTTTTTGGTACTCGCTAATGTACTATCCTC
TCTCGAGCGGCGGAAACCCGAGATTCGGCGGTCTGAAAGAGCAGCAGCAA
CTCTCATTCGAGTCAGGAGAGCCTTGGTTCCCGGGAGACTTTCCAGGAAC
CCGCGCTGGCTGGGAATGGGGCCTGCGTGAGCGAGAAGAAGCGAAGCGCG
ACTGGGAGCGACGCCCCAAGGGACGCAGAACCGAGTTCGAGAGCGTCGAC
CTGCGGAATGGTCAAAAGGGCGAGATAGGACGCGGCTGGGCCTGCGACTG
GGAAAGACTCATTCAGGGAGCACCAGAGACGAGCAGTACAACAGACAAGG
AACAACCCGAAATCAAAGCCGACGACACCACCAGCCCTCAAGACAACAAC
ACCAATGCCATCCACCCACCACTGAATATCCACCAACTCTCAACATCTGA
AGCAGCACGCGCCCTAACCGACGCCTCAAACACCCCCATCAACACCTCAG
CCCTAGCAACTGTCAAACTTACCCTCCTCAACCGCGGCACACCCACACCC
CGAGCCCGCATCTACCGACTCCCTACCACCGATCCCGAGCTCCGCCAGAA
TTGGCTCTCGCTGTCATCAAACAATTCCAACGATAATCTTAGGGATCAGC
TGAAGAAGAAACAATCTCCTCGCGCCGCCCCTCTCGGCGAAGAAGATGTC
CGGCAACAGCTCGCTGCATCGCTTATCACCCCGTCTGCGGATGATGATGT
CCGTCAAAATCACTTGCCGGTTCCAACTGAGGAAGATCTCATTGGCTTCG
TCACGACGGGCAATTACAACCTTGCGGAAGGAAAGGGTACGGGTATTGGA
TCTGTTCTGTTGTCGAAGGTGGGGAAGGGGAAAGCGAGTGGCAGGAATAT
GTGTATTATAAGGAGTGCGGGGGAGACCGTGGCGAGGGTGGGATTTTGGG
AGTTGGTTTGATGGTCTGTGTATAGATGGATTGTTGTTGCATGATACCCT
GTGTGTCTTTGATTGATTGTTTGAGGAGGAGAGGGTTAGAAGCATAGAAA
ATGATAGAGCTGAATGTTGAAGTTCTGCCCATTTAGTTGGGAGAATTCAA
AGAATCCATACTTGCTCCAACCACA back to topCoding sequence (CDS) from alignment at ch3:1403436..1406460- >KJC3_003248-T1 ID=KJC3_003248-T1|Name=KJC3_003248-T1|organism=Aspergillus niger KJC3|type=CDS|length=5262bp|location=Sequence derived from alignment at ch3:1403436..1406460- (Aspergillus niger KJC3)
ATGATAGAAGACAACACCCCCACGGTATCATCACGAACCCGCAAACCCAC
CGAACAAATGCGCATTCGGCTCGAAACCGCCCGCCGACTACAGAACCTGA
ACGCGAAGACGAAAGCCAAGCGCACGGCCCTGAAAGATCAGCGAGATAAA
GAGGTCCGGAAGACGTTGGAAGAATCAGGTAGTCATGCGTATGACATTGC
GCCCCGGGTGCCCAAAATCAAGAAGAATAAACTGTCGAGGCCGAATCCGC
CGGAAGCCAGGTTCAAGAAACGCCAGCAGTGCAAGACTTGGTTGCCGACG
CATATGTTTCATGCCAAGAGGGCGCATATGGCTACTTCTAAGGATCCGTT
GTGGCGGTTTGCGGTGCCGTTGTCGCCTACGGAGAAGAGCTATCGGCCTA
CGCATCGGGCGAGGGGGTCGAGGGGCGCGGTGGCGTGGGATATGAGCTAT
CTGGCTACAGTTCAGTTGGAGGGGACGGTGGGGGCGATTGAGGGGGTGTT
GAGGGCTGTTGGAGTTGAGGGGGAAAAGGCGTGGGGTGTTAAAGGGAGGA
AGTGGAGGGGTGGCACGAGGGGTTTGCGTGCTTGGGCATATGAGTGGGAG
GGTGAGAGGAGGCCGATTGCGCCGGTTACGTTGGTTTGGTGTGCTGAGGT
GAAAGGAGAGGATGTGGAGATGGTGGATGCTGATGAAAGTGGGACGCAGA
GGAAGGGAAAGAAGGACTGGAGGAAGGTGTTTGTTCGAGTGCATCCGTCT
GCGTTTTTGCAGTTGTGGAATGCCCTCCTGGGTGTCTCGAAGAAGCAGAA
CCCTCCTGTTATGGTCGAGGATTTGCGGTTCGAGATTGGCAGTATCGAAA
TTACTGGTCCCGGCGCAACGGAGGCATTGCTCGCGTCGTTCAAGCCGGTT
GCTATGGATGGGAAGGATATTGCTGAGGATAGTCCGGAGGCTATTTGGAC
TTCGCTCCTTGGGGTAACGAACCCTGCATCTCTGCCGCAGGACGCAGTCC
TTGGGTTCTCTGTCTCCGACCCTCGCCTCGAATTTCCGCCCAAGACTCTG
AAGCCGTCGTCGTCAGAGGATGAGATGCAACGGCTGGCTATACTACTTTC
GTCGTGGTCGCCAGACAACACGCAGACAGCCCCTGCTCTCTTCGATCGTC
GCACCCGTCTAGCTGCCGCACGCCAGCTGCCTAGCCAAAAGGCTATCAAT
CGGCGTCGTTCCGAAGCTGGTCCTGGTGTACGCCCGCCCGCCAAAGATAC
CGACCCCAAGGTACCTGTGATGGTTCTCGCCAGTCGACCTGCTCACTCCA
AGAGCAGCAGCGCCCCTGGAACCTGGACTGTCCTTCTCCCATGGAAGTGT
GTGCTTCCTTTTTGGTACTCGCTAATGTACTATCCTCTCTCGAGCGGCGG
AAACCCGAGATTCGGCGGTCTGAAAGAGCAGCAGCAACTCTCATTCGAGT
CAGGAGAGCCTTGGTTCCCGGGAGACTTTCCAGGAACCCGCGCTGGCTGG
GAATGGGGCCTGCGTGAGCGAGAAGAAGCGAAGCGCGACTGGGAGCGACG
CCCCAAGGGACGCAGAACCGAGTTCGAGAGCGTCGACCTGCGGAATGGTC
AAAAGGGCGAGATAGGACGCGGCTGGGCCTGCGACTGGGAAAGACTCATT
CAGGGAGCACCAGAGACGAGCAGTACAACAGACAAGGAACAACCCGAAAT
CAAAGCCGACGACACCACCAGCCCTCAAGACAACAACACCAATGCCATCC
ACCCACCACTGAATATCCACCAACTCTCAACATCTGAAGCAGCACGCGCC
CTAACCGACGCCTCAAACACCCCCATCAACACCTCAGCCCTAGCAACTGT
CAAACTTACCCTCCTCAACCGCGGCACACCCACACCCCGAGCCCGCATCT
ACCGACTCCCTACCACCGATCCCGAGCTCCGCCAGAATTGGCTCTCGCTG
TCATCAAACAATTCCAACGATAATCTTAGGGATCAGCTGAAGAAGAAACA
ATCTCCTCGCGCCGCCCCTCTCGGCGAAGAAGATGTCCGGCAACAGCTCG
CTGCATCGCTTATCACCCCGTCTGCGGATGATGATGTCCGTCAAAATCAC
TTGCCGGTTCCAACTGAGGAAGATCTCATTGGCTTCGTCACGACGGGCAA
TTACAACCTTGCGGAAGGAAAGGGTACGGGTATTGGATCTGTTCTGTTGT
CGAAGGTGGGGAAGGGGAAAGCGAGTGGCAGGAATATGTGTATTATAAGG
AGTGCGGGGGAGACCGTGGCGAGGGTGGGATTTTGGGAGTTGGTTTGAAT
GGCCTCCCATCCTGCGAAGCGCAAACCTGCTGCTCCCAACAACAATTTCT
CCGCCGCCGCCGCCCGCAAACGCCAAAAAACATTTGATGCGCGCTCGCTC
GCCGTGCAGGCCGCCGACGCGGCACTATCTGCCTCCGGCGAACTAGATGT
CGCTGCGTACGTGGAAGCAAGGGAATACGAGATCCGATCGCTCGAGTCGG
GGATCCAGCGATCGAAGAATGCGTTGACGAGTCGGGCGTTCCAGAAGGTG
CCGAGGTCTTTGAGGAGACGGACTGCGAGTCATAATGTGAAGAGGGTACC
GAAGAGATTGAGGGCGAGGGCGAAAAGAGAGATGATAGAAGACAACACCC
CCACGGTATCATCACGAACCCGCAAACCCACCGAACAAATGCGCATTCGG
CTCGAAACCGCCCGCCGACTACAGAACCTGAACGCGAAGACGAAAGCCAA
GCGCACGGCCCTGAAAGATCAGCGAGATAAAGAGGTCCGGAAGACGTTGG
AAGAATCAGGTAGTCATGCGTATGACATTGCGCCCCGGGTGCCCAAAATC
AAGAAGAATAAACTGTCGAGGCCGAATCCGCCGGAAGCCAGGTTCAAGAA
ACGCCAGCAGTGCAAGACTTGGTTGCCGACGCATATGTTTCATGCCAAGA
GGGCGCATATGGCTACTTCTAAGGATCCGTTGTGGCGGTTTGCGGTGCCG
TTGTCGCCTACGGAGAAGAGCTATCGGCCTACGCATCGGGCGAGGGGGTC
GAGGGGCGCGGTGGCGTGGGATATGAGCTATCTGGCTACAGTTCAGTTGG
AGGGGACGGTGGGGGCGATTGAGGGGGTGTTGAGGGCTGTTGGAGTTGAG
GGGGAAAAGGCGTGGGGTGTTAAAGGGAGGAAGTGGAGGGGTGGCACGAG
GGGTTTGCGTGCTTGGGCATATGAGTGGGAGGGTGAGAGGAGGCCGATTG
CGCCGGTTACGTTGGTTTGGTGTGCTGAGGTGAAAGGAGAGGATGTGGAG
ATGGTGGATGCTGATGAAAGTGGGACGCAGAGGAAGGGAAAGAAGGACTG
GAGGAAGGTGTTTGTTCGAGTGCATCCGTCTGCGTTTTTGCAGTTGTGGA
ATGCCCTCCTGGGTGTCTCGAAGAAGCAGAACCCTCCTGTTATGGTCGAG
GATTTGCGGTTCGAGATTGGCAGTATCGAAATTACTGGTCCCGGCGCAAC
GGAGGCATTGCTCGCGTCGTTCAAGCCGGTTGCTATGGATGGGAAGGATA
TTGCTGAGGATAGTCCGGAGGCTATTTGGACTTCGCTCCTTGGGGTAACG
AACCCTGCATCTCTGCCGCAGGACGCAGTCCTTGGGTTCTCTGTCTCCGA
CCCTCGCCTCGAATTTCCGCCCAAGACTCTGAAGCCGTCGTCGTCAGAGG
ATGAGATGCAACGGCTGGCTATACTACTTTCGTCGTGGTCGCCAGACAAC
ACGCAGACAGCCCCTGCTCTCTTCGATCGTCGCACCCGTCTAGCTGCCGC
ACGCCAGCTGCCTAGCCAAAAGGCTATCAATCGGCGTCGTTCCGAAGCTG
GTCCTGGTGTACGCCCGCCCGCCAAAGATACCGACCCCAAGGTACCTGTG
ATGGTTCTCGCCAGTCGACCTGCTCACTCCAAGAGCAGCAGCGCCCCTGG
AACCTGGACTGTCCTTCTCCCATGGAAGTGTGTGCTTCCTTTTTGGTACT
CGCTAATGTACTATCCTCTCTCGAGCGGCGGAAACCCGAGATTCGGCGGT
CTGAAAGAGCAGCAGCAACTCTCATTCGAGTCAGGAGAGCCTTGGTTCCC
GGGAGACTTTCCAGGAACCCGCGCTGGCTGGGAATGGGGCCTGCGTGAGC
GAGAAGAAGCGAAGCGCGACTGGGAGCGACGCCCCAAGGGACGCAGAACC
GAGTTCGAGAGCGTCGACCTGCGGAATGGTCAAAAGGGCGAGATAGGACG
CGGCTGGGCCTGCGACTGGGAAAGACTCATTCAGGGAGCACCAGAGACGA
GCAGTACAACAGACAAGGAACAACCCGAAATCAAAGCCGACGACACCACC
AGCCCTCAAGACAACAACACCAATGCCATCCACCCACCACTGAATATCCA
CCAACTCTCAACATCTGAAGCAGCACGCGCCCTAACCGACGCCTCAAACA
CCCCCATCAACACCTCAGCCCTAGCAACTGTCAAACTTACCCTCCTCAAC
CGCGGCACACCCACACCCCGAGCCCGCATCTACCGACTCCCTACCACCGA
TCCCGAGCTCCGCCAGAATTGGCTCTCGCTGTCATCAAACAATTCCAACG
ATAATCTTAGGGATCAGCTGAAGAAGAAACAATCTCCTCGCGCCGCCCCT
CTCGGCGAAGAAGATGTCCGGCAACAGCTCGCTGCATCGCTTATCACCCC
GTCTGCGGATGATGATGTCCGTCAAAATCACTTGCCGGTTCCAACTGAGG
AAGATCTCATTGGCTTCGTCACGACGGGCAATTACAACCTTGCGGAAGGA
AAGGGTACGGGTATTGGATCTGTTCTGTTGTCGAAGGTGGGGAAGGGGAA
AGCGAGTGGCAGGAATATGTGTATTATAAGGAGTGCGGGGGAGACCGTGG
CGAGGGTGGGATTTTGGGAGTTGGTTTGAATGGCCTCCCATCCTGCGAAG
CGCAAACCTGCTGCTCCCAACAACAATTTCTCCGCCGCCGCCGCCCGCAA
ACGCCAAAAAACATTTGATGCGCGCTCGCTCGCCGTGCAGGCCGCCGACG
CGGCACTATCTGCCTCCGGCGAACTAGATGTCGCTGCGTACGTGGAAGCA
AGGGAATACGAGATCCGATCGCTCGAGTCGGGGATCCAGCGATCGAAGAA
TGCGTTGACGAGTCGGGCGTTCCAGAAGGTGCCGAGGTCTTTGAGGAGAC
GGACTGCGAGTCATAATGTGAAGAGGGTACCGAAGAGATTGAGGGCGAGG
GCGAAAAGAGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003248-T1.utr3p1 | KJC3_003248-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003248-T1.utr5p1 | KJC3_003248-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260TPT |
| DBxref | InterPro:IPR012590 |
| DBxref | InterPro:IPR009723 |
| DBxref | PFAM:PF08170 |
| DBxref | PFAM:PF06978 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1403436..1406460 - |
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