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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1455344..1456813- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003264-T1 ID=KJC3_003264-T1|Name=KJC3_003264-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1470bp|location=Sequence derived from alignment at ch3:1455344..1456813- (Aspergillus niger KJC3)
AACGGATCCTTTCTCAAGGCCGCTCCTTTTCATCCAAAACATCACCTACT
ATCCTTCTACTTTACGGACACTCTCCCAGACCCTGGTTTACTTCTTTCTT
GCCTGCATCTAGTATACCAAAGGCGATCCACTCTATTTTCCGAGATGGAG
TACCACTTCGTTCCTCCGGAGGAGCGCGCCAGAGACGACAAGGGTAACCT
CCTACCCTGGGGCTACGTTTACAAAGAGTAAGTCTTATATCATTGCATCC
ATTTTTCAACCCGCTTCAACCCGATCTCATTCATCACCTTTTCCAGTGAA
TCTCGCAATCCCCGCCGCCCCCCCGAAGAGTCCGGCCCTTTTGGCAAGCG
CAGAAACGCCCGCTACGAACACACCCGATCTCGCACACGCACTGGCACGC
CAGCAGCAAAGCGCGAAAACCCCAATGTAGCAGAATTCGGGCGTCTATTC
GCCCAACAACAAGAAGAGGAGAAAGCGCGCAGCAACACCCTGCCCAAGTC
GTCCTCCGCTTCCAACCTTGACAACGCCCGGAAGCAACAGACAGAAAAGG
TCGCAACAGAGTGCATACTATACGGATACAAGAGCAAGGATTTCGAATGG
AAAGTGATAGACAAGTACGAGCGGATCTCTCGCGGTTTCATCTGTGAGGA
CTATCCGCGGACAGACCCCAATGCTTCGAACGGGTATTCGCAGCTTTTGA
GCGGCGGTGATGTGGTCATCCGGGCGAACTTGTCAGCGGACGCGAATCGC
AAATCGAAGCGCTATGCGGGCGGATTTCACTGGATTAAAGTCACGTTTGA
TTCGACGACAGCGGCCGATCGCGCGTGCTTTTACTCTCCGCAGGAAATCG
ATGGCCATTTGGTCTTTTGTGAGCTGTATCATGGCCAGGGACCTGCGGAG
GACGCCCCTATCGTGCAAGGATCTGCGGAGGCGACTCGTCTCCAGTCGAA
GGCGGCGCCTCGCACTCTGACTTCGTCGCATTCGACGAGTTTCCTCCAAC
CGAAGGACACAGCCACCAAGGAACGCCATACGCTGCCGAGATCTTTCGCC
TCGAATAACCTGTCCAGTATCCTCGACGCCCATGAGGAGGAATCCCAGGA
ATCATCATCAACCCCCACCGCTAGCTCCGCAACAGCCACCGCCATCGAGC
AACCAGCACCTCTGCAACAGCGTACAGTCGTCAAGGAGCCCAAGCCTGAA
TCAGACTTCATGACGCATATCCCGACGGTGCGTCGGACGAAACTCCGCCC
CATCACAGAAGCCCTTCCGCCTCAGCCTACGGTCACGGAGCGGGTGCTAC
GCTCAATCCCCATTCTCAGCTGGTTCACGGGCGATATTGTGGGCGATGGA
CCTCAACTCCGCGAAGACGGGGCATTCGATTTCGACAAGTCGAATACTTA
CTGGAAATTCTGGTACATGGTTGATAGAATTTTGGGGACGGATATCTGCG
GACTGAAGGAAGAATCATGA back to topCoding sequence (CDS) from alignment at ch3:1455344..1456813- >KJC3_003264-T1 ID=KJC3_003264-T1|Name=KJC3_003264-T1|organism=Aspergillus niger KJC3|type=CDS|length=2514bp|location=Sequence derived from alignment at ch3:1455344..1456813- (Aspergillus niger KJC3)
TGAATCTCGCAATCCCCGCCGCCCCCCCGAAGAGTCCGGCCCTTTTGGCA
AGCGCAGAAACGCCCGCTACGAACACACCCGATCTCGCACACGCACTGGC
ACGCCAGCAGCAAAGCGCGAAAACCCCAATGTAGCAGAATTCGGGCGTCT
ATTCGCCCAACAACAAGAAGAGGAGAAAGCGCGCAGCAACACCCTGCCCA
AGTCGTCCTCCGCTTCCAACCTTGACAACGCCCGGAAGCAACAGACAGAA
AAGGTCGCAACAGAGTGCATACTATACGGATACAAGAGCAAGGATTTCGA
ATGGAAAGTGATAGACAAGTACGAGCGGATCTCTCGCGGTTTCATCTGTG
AGGACTATCCGCGGACAGACCCCAATGCTTCGAACGGGTATTCGCAGCTT
TTGAGCGGCGGTGATGTGGTCATCCGGGCGAACTTGTCAGCGGACGCGAA
TCGCAAATCGAAGCGCTATGCGGGCGGATTTCACTGGATTAAAGTCACGT
TTGATTCGACGACAGCGGCCGATCGCGCGTGCTTTTACTCTCCGCAGGAA
ATCGATGGCCATTTGGTCTTTTGTGAGCTGTATCATGGCCAGGGACCTGC
GGAGGACGCCCCTATCGTGCAAGGATCTGCGGAGGCGACTCGTCTCCAGT
CGAAGGCGGCGCCTCGCACTCTGACTTCGTCGCATTCGACGAGTTTCCTC
CAACCGAAGGACACAGCCACCAAGGAACGCCATACGCTGCCGAGATCTTT
CGCCTCGAATAACCTGTCCAGTATCCTCGACGCCCATGAGGAGGAATCCC
AGGAATCATCATCAACCCCCACCGCTAGCTCCGCAACAGCCACCGCCATC
GAGCAACCAGCACCTCTGCAACAGCGTACAGTCGTCAAGGAGCCCAAGCC
TGAATCAGACTTCATGACGCATATCCCGACGGTGCGTCGGACGAAACTCC
GCCCCATCACAGAAGCCCTTCCGCCTCAGCCTACGGTCACGGAGCGGGTG
CTACGCTCAATCCCCATTCTCAGCTGGTTCACGGGCGATATTGTGGGCGA
TGGACCTCAACTCCGCGAAGACGGGGCATTCGATTTCGACAAGTCGAATA
CTTACTGGAAATTCTGGTACATGGTTGATAGAATTTTGGGGACGGATATC
TGCGGACTGAAGGAAGAATCATGAATGGAGTACCACTTCGTTCCTCCGGA
GGAGCGCGCCAGAGACGACAAGGGTAACCTCCTACCCTGGGGCTACGTTT
ACAAAGATGAATCTCGCAATCCCCGCCGCCCCCCCGAAGAGTCCGGCCCT
TTTGGCAAGCGCAGAAACGCCCGCTACGAACACACCCGATCTCGCACACG
CACTGGCACGCCAGCAGCAAAGCGCGAAAACCCCAATGTAGCAGAATTCG
GGCGTCTATTCGCCCAACAACAAGAAGAGGAGAAAGCGCGCAGCAACACC
CTGCCCAAGTCGTCCTCCGCTTCCAACCTTGACAACGCCCGGAAGCAACA
GACAGAAAAGGTCGCAACAGAGTGCATACTATACGGATACAAGAGCAAGG
ATTTCGAATGGAAAGTGATAGACAAGTACGAGCGGATCTCTCGCGGTTTC
ATCTGTGAGGACTATCCGCGGACAGACCCCAATGCTTCGAACGGGTATTC
GCAGCTTTTGAGCGGCGGTGATGTGGTCATCCGGGCGAACTTGTCAGCGG
ACGCGAATCGCAAATCGAAGCGCTATGCGGGCGGATTTCACTGGATTAAA
GTCACGTTTGATTCGACGACAGCGGCCGATCGCGCGTGCTTTTACTCTCC
GCAGGAAATCGATGGCCATTTGGTCTTTTGTGAGCTGTATCATGGCCAGG
GACCTGCGGAGGACGCCCCTATCGTGCAAGGATCTGCGGAGGCGACTCGT
CTCCAGTCGAAGGCGGCGCCTCGCACTCTGACTTCGTCGCATTCGACGAG
TTTCCTCCAACCGAAGGACACAGCCACCAAGGAACGCCATACGCTGCCGA
GATCTTTCGCCTCGAATAACCTGTCCAGTATCCTCGACGCCCATGAGGAG
GAATCCCAGGAATCATCATCAACCCCCACCGCTAGCTCCGCAACAGCCAC
CGCCATCGAGCAACCAGCACCTCTGCAACAGCGTACAGTCGTCAAGGAGC
CCAAGCCTGAATCAGACTTCATGACGCATATCCCGACGGTGCGTCGGACG
AAACTCCGCCCCATCACAGAAGCCCTTCCGCCTCAGCCTACGGTCACGGA
GCGGGTGCTACGCTCAATCCCCATTCTCAGCTGGTTCACGGGCGATATTG
TGGGCGATGGACCTCAACTCCGCGAAGACGGGGCATTCGATTTCGACAAG
TCGAATACTTACTGGAAATTCTGGTACATGGTTGATAGAATTTTGGGGAC
GGATATCTGCGGACTGAAGGAAGAATCATGAATGGAGTACCACTTCGTTC
CTCCGGAGGAGCGCGCCAGAGACGACAAGGGTAACCTCCTACCCTGGGGC
TACGTTTACAAAGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003264-T1.utr5p1 | KJC3_003264-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012677 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1455344..1456813 - |
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