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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1467791..1469571+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003268-T2 ID=KJC3_003268-T2|Name=KJC3_003268-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1781bp|location=Sequence derived from alignment at ch3:1467791..1469571+ (Aspergillus niger KJC3)
TGATCAGGATCCCGAGGCATGGCTGGTTCACGTGCCGGCTGCATGAGGTA
CAAGTCTATCCGTGAGGGGGCTGATTATAGAGTTACCTTTTGCTGTCAGC
ATCTGTTCTTTCATGTAAAAATCCTGAAATCGAAAGGCATTATTAAATAT
TTTCACACGCAATATGTCGGAGAACTACGGCGACTATCAGACTGAGATCT
ATGGCCGAGGAGCATTGACAGGCGTCCTGCCTAATGTCACTACCGACCCT
CGCTTACTTGAAAAACAGGCAAAGAAGGCCTTGGGCGCTCGTAGCTTCAA
CTATGTGGCTGGCGGTGCTGGAGAGAAGGCTACAATGGATAGCAATCGAC
TGGCTTTTCGACAATGGAAGCTGTGAGTTGAGTCGTTTCCGCCGCGATAT
TGCGATGTAGAGTCGGAAGACTGACGCGTATAACGCTTGATGAAATGAAA
AGAATCCCGCGGATGCTGAAACCGGTTAGTAGACTTCAGTCGCTTTCCCA
AGTCCCAGCGCTGACCAATGGTTGTGTCCGCGTAGATGAATGATCAGAAC
CTCGCGGTAAACCTTTTCGGCCAGCACTATCCAACCCCTCTTCTCATGGC
GCCGGTCGGCGTCCAGTCTATATTTCATGATGATAAGGAGTCTGGCCTTG
CAGAAGCTTGCGGGAATGTCGGGATCCCGTATATCCTGAGCACCGCGAGT
AGCAGCTCGATTGAGGAGGTTGCACAGGCAAATGGAGACGGTAAAAGATG
GTTCCAACTTTACTGGCCGCGCGACGATGATATTACGCTATCATTGCTGA
AACGCGCCAAAGACAATGGGTTCTCCGTCCTGGTAGTTACCCTAGACACT
TGGTCGCTCGCTTGGCGACCAGCGGACCTGGACAATGCCTACGTTCCGTT
CATACGGGGCGTCGGCAACACACTCGGTTTCACGGATCCCGTGTTCCGTT
CGAAATTTGAGAAGGAATCCGGTTCGACAGTAGAAGAGGACATCGTGGGG
GCATCCAAGGCATGGATTTCCCAGGTATTCTATGGTCAGCCACATGCGTG
GGAGCAAATTGCATTTTTGCGAAAGAATTGGGATGGTCCACTTGTGCTCA
AGGGCATTCAGCATGTAGATGATGCGAAGCTTGCCCTTGAGGCCGGATGT
GACGGTATTGTCGTTTCAAACCATGGAGGTATGTGGCAGCCACTCTCCAG
CGAGGCTTCTCTGTATTAATATGTATACAGGTCGACAGGTTGATGGTGCG
ATCGGCTCCCTCGAAGTTCTCCCTGAGATAGTTGATGCTGTTGGTGGCAA
GATGACAGTCCTGTTTGATTCAGGGGTTCGCACTGGAGCAGATATCATCA
AAGCGCTTTGTCTGGGAGCGGATGCTGTCTTGGTTGGTAGGCCCGTGATC
TATGGGTTGGCAATCGATGGAAAAAATGGGGCTGAAGCCGTGATGAAGGG
ACTTTTGGCGGATCTCTGGCAGACTATGAGTCTGTCAGGGATACGTACCG
TGGCCGAGTGCACCCGCGACAAGATCAGAAAAGTTGTGTACCCTGGAGAT
GGGAAGGCAATGTTGTGACATGTAGCATATTATTGGCCGGCAACGTGAAG
ATGCCCAATTCAGGAGAAGATCTGATGACGGAGTTTGGGGAAGGAATGAG
GGGAAACTGGAGCCTGTGGGGTAGCACCAAATCTTGAAACTTGTATACTT
GCTTCGCGATAATGTATTCGCGTTGCGAGCTCCACACAGAGGAAGAAGAA
ACAACTACCAGTGTCTATAATGAGTTAGTCG back to topCoding sequence (CDS) from alignment at ch3:1467791..1469571+ >KJC3_003268-T2 ID=KJC3_003268-T2|Name=KJC3_003268-T2|organism=Aspergillus niger KJC3|type=CDS|length=1962bp|location=Sequence derived from alignment at ch3:1467791..1469571+ (Aspergillus niger KJC3)
ATGAATGATCAGAACCTCGCGGTAAACCTTTTCGGCCAGCACTATCCAAC
CCCTCTTCTCATGGCGCCGGTCGGCGTCCAGTCTATATTTCATGATGATA
AGGAGTCTGGCCTTGCAGAAGCTTGCGGGAATGTCGGGATCCCGTATATC
CTGAGCACCGCGAGTAGCAGCTCGATTGAGGAGGTTGCACAGGCAAATGG
AGACGGTAAAAGATGGTTCCAACTTTACTGGCCGCGCGACGATGATATTA
CGCTATCATTGCTGAAACGCGCCAAAGACAATGGGTTCTCCGTCCTGGTA
GTTACCCTAGACACTTGGTCGCTCGCTTGGCGACCAGCGGACCTGGACAA
TGCCTACGTTCCGTTCATACGGGGCGTCGGCAACACACTCGGTTTCACGG
ATCCCGTGTTCCGTTCGAAATTTGAGAAGGAATCCGGTTCGACAGTAGAA
GAGGACATCGTGGGGGCATCCAAGGCATGGATTTCCCAGGTATTCTATGG
TCAGCCACATGCGTGGGAGCAAATTGCATTTTTGCGAAAGAATTGGGATG
GTCCACTTGTGCTCAAGGGCATTCAGCATGTAGATGATGCGAAGCTTGCC
CTTGAGGCCGGATGTGACGGTATTGTCGTTTCAAACCATGGAGGTCGACA
GGTTGATGGTGCGATCGGCTCCCTCGAAGTTCTCCCTGAGATAGTTGATG
CTGTTGGTGGCAAGATGACAGTCCTGTTTGATTCAGGGGTTCGCACTGGA
GCAGATATCATCAAAGCGCTTTGTCTGGGAGCGGATGCTGTCTTGGTTGG
TAGGCCCGTGATCTATGGGTTGGCAATCGATGGAAAAAATGGGGCTGAAG
CCGTGATGAAGGGACTTTTGGCGGATCTCTGGCAGACTATGAGTCTGTCA
GGGATACGTACCGTGGCCGAGTGCACCCGCGACAAGATCAGAAAAGTTGT
GTACCCTGGAGATGGGAAGGCAATGTTGTGAATGAATGATCAGAACCTCG
CGGTAAACCTTTTCGGCCAGCACTATCCAACCCCTCTTCTCATGGCGCCG
GTCGGCGTCCAGTCTATATTTCATGATGATAAGGAGTCTGGCCTTGCAGA
AGCTTGCGGGAATGTCGGGATCCCGTATATCCTGAGCACCGCGAGTAGCA
GCTCGATTGAGGAGGTTGCACAGGCAAATGGAGACGGTAAAAGATGGTTC
CAACTTTACTGGCCGCGCGACGATGATATTACGCTATCATTGCTGAAACG
CGCCAAAGACAATGGGTTCTCCGTCCTGGTAGTTACCCTAGACACTTGGT
CGCTCGCTTGGCGACCAGCGGACCTGGACAATGCCTACGTTCCGTTCATA
CGGGGCGTCGGCAACACACTCGGTTTCACGGATCCCGTGTTCCGTTCGAA
ATTTGAGAAGGAATCCGGTTCGACAGTAGAAGAGGACATCGTGGGGGCAT
CCAAGGCATGGATTTCCCAGGTATTCTATGGTCAGCCACATGCGTGGGAG
CAAATTGCATTTTTGCGAAAGAATTGGGATGGTCCACTTGTGCTCAAGGG
CATTCAGCATGTAGATGATGCGAAGCTTGCCCTTGAGGCCGGATGTGACG
GTATTGTCGTTTCAAACCATGGAGGTCGACAGGTTGATGGTGCGATCGGC
TCCCTCGAAGTTCTCCCTGAGATAGTTGATGCTGTTGGTGGCAAGATGAC
AGTCCTGTTTGATTCAGGGGTTCGCACTGGAGCAGATATCATCAAAGCGC
TTTGTCTGGGAGCGGATGCTGTCTTGGTTGGTAGGCCCGTGATCTATGGG
TTGGCAATCGATGGAAAAAATGGGGCTGAAGCCGTGATGAAGGGACTTTT
GGCGGATCTCTGGCAGACTATGAGTCTGTCAGGGATACGTACCGTGGCCG
AGTGCACCCGCGACAAGATCAGAAAAGTTGTGTACCCTGGAGATGGGAAG
GCAATGTTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0010181 | FMN binding |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003268-T2.utr5p1 | KJC3_003268-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003268-T2.utr3p1 | KJC3_003268-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037396 |
| DBxref | InterPro:IPR008259 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR012133 |
| DBxref | InterPro:IPR000262 |
| DBxref | PFAM:PF01070 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1467791..1469571 + |
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