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KJC3_003280-T1, KJC3_003280-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003280-T1
Unique NameKJC3_003280-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1513234..1515306+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003280-T1 ID=KJC3_003280-T1|Name=KJC3_003280-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2073bp|location=Sequence derived from alignment at ch3:1513234..1515306+ (Aspergillus niger KJC3)
ATGTCCCACGAAGAGGATCTCATCGACTACTCCGACGAGGAGCTTCAGAC
CACTGACGCGGCGGCCACCACCGCTGCTCCCGCCTCTAACGGAGAGGCTA
AGAAGGGCGACTTGACGGTTTCTGGCGGCCGTCCGGACAAGAAGGGTAGT
TACGTCGGTATCCATTCGACCGGTTTCCGCGACTTTTTGCTCAAAGAGGA
ACTCCTACGTGCCATCACCGATTGCGGTTTCGAACATCCATCGGAGGGTT
AGTCTATCACGTATTCTTTCCCAAAGCTCCCTCCATTGCTCCATGTTCCA
ACGTCCGTCCATCTCCGCGGGGAAAATCCATAGTCGTTTTGGGGCGCCCA
TCTCGCCTCAGCTTGCGGGTGGCATGAGGATGTCTGTTTCGCGTCATACA
TAAGACGAGTCGCCCTGCGGCAGTAGTGCATCTACAGCCTTTGCTTGTTT
GCTTCACTTTACTCTGGTGAATTACGGCAACACCATGCTCAGGGAATACC
ACAGATTGGTTTGTTCGCCTGCAGAGATTCTGGATGAATCGTGGTTTGCT
TCCGAAGAACACGGGTCGGACGCTTTTCCACCGTTCTCTGAATTGCAGCC
GTCCTCCTGCCGCCTGCAGAAAGAGCTCTGAACAAGATGTCTTACTGCAG
CTGACACAATTTTCGACTGTGTGCAAGTTCATTTGACTTTCGTTGTTTGG
TGGAAGAAAATGTGGGACTATAATGCATCCCTTCAGACTCAAAACCTCGG
GGATGGACGGACGCTGCGACGCGAATTGCTTTTTCTCTTTCTCAAAACTT
ATGGGTCGAGTACAAGTCTAACATACGGTTCCGCCTCACTACAGTCCAGC
AAGTCTGCATTCCTACCGCCATTCTGAACGTCGATGTTCTCTGCCAGGCC
AAGTCTGGTCTCGGAAAGACCGCGGTCTTCGTTTTGACCACTCTGCACCA
GCTGGAGCCGGTTCCTGGCGAGTGCTCTATCCTTGTTATGTGCCACACCC
GCGAGTTGGCATACCAGATCAAGAACGAGTACGCTCGTTTCAGCAAGTAC
CTTCCTGATGTCAAGACTGCTGTCTTCTACGGAGGTACCCCTATTCAGAA
GGACGTTGAATTGCTATCCAACAAGGAGTCCTACCCCAACATTGTTGTTG
GTACTCCTGGTCGTCTGAACGCCTTGGTCCGTGACAAGAAGCTTTCTCTG
CGCAACGTCAAGGCTTTCGTTCTCGACGAGTGTGATAAGATGCTGGACCA
GATCGGTGAGTTTATTTATGTGAGGTTATCTTACGCCGTACTGATGATTC
GTAATAGACATGCGTCGTGATGTCCAGGAGATCTTCCGTGCCACCCCTGC
CGACAAGCAGGTTATGATGTTCAGTGCCACTCTTTCTCAGGAGATCCGCC
CCGTGTGCAAGAAGTTCATGAGGAACCCTCTCGAGGTCTACGTCGATGAC
GACACGAAGCTCACGCTGCACGGTCTGCAGCAATATTACATTAAGCTCAG
CGAAGCGGAGAAGAACCGCAAGCTGAACGAGCTCCTGGATAGCCTGGAGT
TCAACCAGGTTATCATCTTCGTCAAGAGCACCCTGCGTGCGAATGAGCTC
GACAAGCTGTTGCGCGAGTGCAACTTCCCCAGTATTGCGGTGCACTCTGG
TGTGAGCCAGGAGGAGCGGTAGGAGTACTTGTTATTCATGTCTTTACTAT
GTACTAACGGTTGGTAGTATCAAACGCTACAAGGAGTTCAAGGAATTCAA
CAAGCGTATCTGTGTTGCGACCGACGTGTTCGGACGTGGTATCGATATTG
AGCGTATCAACCTTGCCATCAACTACGACTTGCCGGCTGATGCCGACTCC
TACCTGCACCGTGTCGGTCGTGCGGGTCGTTTCGGTACCAAGGGTCTGTC
GATTTCTTTTGTCAGCACCGAGGATGACGAGAAGGTGCTCAAGGACATCG
AGAAGCGCTTCGAGGTTGCCCTTCCGTAAGTACAGACCGATGCTTATAAC
CATGCGGGCGAAGCTAATGAATACCAGTGAATACCCCGAGGGCGGCGTCG
ACTCGAGCACTTACATGGCCTAG
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Coding sequence (CDS) from alignment at ch3:1513234..1515306+

>KJC3_003280-T1 ID=KJC3_003280-T1|Name=KJC3_003280-T1|organism=Aspergillus niger KJC3|type=CDS|length=6615bp|location=Sequence derived from alignment at ch3:1513234..1515306+ (Aspergillus niger KJC3)
ATGTCCCACGAAGAGGATCTCATCGACTACTCCGACGAGGAGCTTCAGAC
CACTGACGCGGCGGCCACCACCGCTGCTCCCGCCTCTAACGGAGAGGCTA
AGAAGGGCGACTTGACGGTTTCTGGCGGCCGTCCGGACAAGAAGGGTAGT
TACGTCGGTATCCATTCGACCGGTTTCCGCGACTTTTTGCTCAAAGAGGA
ACTCCTACGTGCCATCACCGATTGCGGTTTCGAACATCCATCGGAGGTCC
AGCAAGTCTGCATTCCTACCGCCATTCTGAACGTCGATGTTCTCTGCCAG
GCCAAGTCTGGTCTCGGAAAGACCGCGGTCTTCGTTTTGACCACTCTGCA
CCAGCTGGAGCCGGTTCCTGGCGAGTGCTCTATCCTTGTTATGTGCCACA
CCCGCGAGTTGGCATACCAGATCAAGAACGAGTACGCTCGTTTCAGCAAG
TACCTTCCTGATGTCAAGACTGCTGTCTTCTACGGAGGTACCCCTATTCA
GAAGGACGTTGAATTGCTATCCAACAAGGAGTCCTACCCCAACATTGTTG
TTGGTACTCCTGGTCGTCTGAACGCCTTGGTCCGTGACAAGAAGCTTTCT
CTGCGCAACGTCAAGGCTTTCGTTCTCGACGAGTGTGATAAGATGCTGGA
CCAGATCGACATGCGTCGTGATGTCCAGGAGATCTTCCGTGCCACCCCTG
CCGACAAGCAGGTTATGATGTTCAGTGCCACTCTTTCTCAGGAGATCCGC
CCCGTGTGCAAGAAGTTCATGAGGAACCCTCTCGAGGTCTACGTCGATGA
CGACACGAAGCTCACGCTGCACGGTCTGCAGCAATATTACATTAAGCTCA
GCGAAGCGGAGAAGAACCGCAAGCTGAACGAGCTCCTGGATAGCCTGGAG
TTCAACCAGGTTATCATCTTCGTCAAGAGCACCCTGCGTGCGAATGAGCT
CGACAAGCTGTTGCGCGAGTGCAACTTCCCCAGTATTGCGGTGCACTCTG
GTGTGAGCCAGGAGGAGCGTATCAAACGCTACAAGGAGTTCAAGGAATTC
AACAAGCGTATCTGTGTTGCGACCGACGTGTTCGGACGTGGTATCGATAT
TGAGCGTATCAACCTTGCCATCAACTACGACTTGCCGGCTGATGCCGACT
CCTACCTGCACCGTGTCGGTCGTGCGGGTCGTTTCGGTACCAAGGGTCTG
TCGATTTCTTTTGTCAGCACCGAGGATGACGAGAAGGTGCTCAAGGACAT
CGAGAAGCGCTTCGAGGTTGCCCTTCCTGAATACCCCGAGGGCGGCGTCG
ACTCGAGCACTTACATGGCCTAGATGTCCCACGAAGAGGATCTCATCGAC
TACTCCGACGAGGAGCTTCAGACCACTGACGCGGCGGCCACCACCGCTGC
TCCCGCCTCTAACGGAGAGGCTAAGAAGGGCGACTTGACGGTTTCTGGCG
GCCGTCCGGACAAGAAGGGTAGTTACGTCGGTATCCATTCGACCGGTTTC
CGCGACTTTTTGCTCAAAGAGGAACTCCTACGTGCCATCACCGATTGCGG
TTTCGAACATCCATCGGAGGTCCAGCAAGTCTGCATTCCTACCGCCATTC
TGAACGTCGATGTTCTCTGCCAGGCCAAGTCTGGTCTCGGAAAGACCGCG
GTCTTCGTTTTGACCACTCTGCACCAGCTGGAGCCGGTTCCTGGCGAGTG
CTCTATCCTTGTTATGTGCCACACCCGCGAGTTGGCATACCAGATCAAGA
ACGAGTACGCTCGTTTCAGCAAGTACCTTCCTGATGTCAAGACTGCTGTC
TTCTACGGAGGTACCCCTATTCAGAAGGACGTTGAATTGCTATCCAACAA
GGAGTCCTACCCCAACATTGTTGTTGGTACTCCTGGTCGTCTGAACGCCT
TGGTCCGTGACAAGAAGCTTTCTCTGCGCAACGTCAAGGCTTTCGTTCTC
GACGAGTGTGATAAGATGCTGGACCAGATCGACATGCGTCGTGATGTCCA
GGAGATCTTCCGTGCCACCCCTGCCGACAAGCAGGTTATGATGTTCAGTG
CCACTCTTTCTCAGGAGATCCGCCCCGTGTGCAAGAAGTTCATGAGGAAC
CCTCTCGAGGTCTACGTCGATGACGACACGAAGCTCACGCTGCACGGTCT
GCAGCAATATTACATTAAGCTCAGCGAAGCGGAGAAGAACCGCAAGCTGA
ACGAGCTCCTGGATAGCCTGGAGTTCAACCAGGTTATCATCTTCGTCAAG
AGCACCCTGCGTGCGAATGAGCTCGACAAGCTGTTGCGCGAGTGCAACTT
CCCCAGTATTGCGGTGCACTCTGGTGTGAGCCAGGAGGAGCGTATCAAAC
GCTACAAGGAGTTCAAGGAATTCAACAAGCGTATCTGTGTTGCGACCGAC
GTGTTCGGACGTGGTATCGATATTGAGCGTATCAACCTTGCCATCAACTA
CGACTTGCCGGCTGATGCCGACTCCTACCTGCACCGTGTCGGTCGTGCGG
GTCGTTTCGGTACCAAGGGTCTGTCGATTTCTTTTGTCAGCACCGAGGAT
GACGAGAAGGTGCTCAAGGACATCGAGAAGCGCTTCGAGGTTGCCCTTCC
TGAATACCCCGAGGGCGGCGTCGACTCGAGCACTTACATGGCCTAGATGT
CCCACGAAGAGGATCTCATCGACTACTCCGACGAGGAGCTTCAGACCACT
GACGCGGCGGCCACCACCGCTGCTCCCGCCTCTAACGGAGAGGCTAAGAA
GGGCGACTTGACGGTTTCTGGCGGCCGTCCGGACAAGAAGGGTAGTTACG
TCGGTATCCATTCGACCGGTTTCCGCGACTTTTTGCTCAAAGAGGAACTC
CTACGTGCCATCACCGATTGCGGTTTCGAACATCCATCGGAGGTCCAGCA
AGTCTGCATTCCTACCGCCATTCTGAACGTCGATGTTCTCTGCCAGGCCA
AGTCTGGTCTCGGAAAGACCGCGGTCTTCGTTTTGACCACTCTGCACCAG
CTGGAGCCGGTTCCTGGCGAGTGCTCTATCCTTGTTATGTGCCACACCCG
CGAGTTGGCATACCAGATCAAGAACGAGTACGCTCGTTTCAGCAAGTACC
TTCCTGATGTCAAGACTGCTGTCTTCTACGGAGGTACCCCTATTCAGAAG
GACGTTGAATTGCTATCCAACAAGGAGTCCTACCCCAACATTGTTGTTGG
TACTCCTGGTCGTCTGAACGCCTTGGTCCGTGACAAGAAGCTTTCTCTGC
GCAACGTCAAGGCTTTCGTTCTCGACGAGTGTGATAAGATGCTGGACCAG
ATCGACATGCGTCGTGATGTCCAGGAGATCTTCCGTGCCACCCCTGCCGA
CAAGCAGGTTATGATGTTCAGTGCCACTCTTTCTCAGGAGATCCGCCCCG
TGTGCAAGAAGTTCATGAGGAACCCTCTCGAGGTCTACGTCGATGACGAC
ACGAAGCTCACGCTGCACGGTCTGCAGCAATATTACATTAAGCTCAGCGA
AGCGGAGAAGAACCGCAAGCTGAACGAGCTCCTGGATAGCCTGGAGTTCA
ACCAGGTTATCATCTTCGTCAAGAGCACCCTGCGTGCGAATGAGCTCGAC
AAGCTGTTGCGCGAGTGCAACTTCCCCAGTATTGCGGTGCACTCTGGTGT
GAGCCAGGAGGAGCGTATCAAACGCTACAAGGAGTTCAAGGAATTCAACA
AGCGTATCTGTGTTGCGACCGACGTGTTCGGACGTGGTATCGATATTGAG
CGTATCAACCTTGCCATCAACTACGACTTGCCGGCTGATGCCGACTCCTA
CCTGCACCGTGTCGGTCGTGCGGGTCGTTTCGGTACCAAGGGTCTGTCGA
TTTCTTTTGTCAGCACCGAGGATGACGAGAAGGTGCTCAAGGACATCGAG
AAGCGCTTCGAGGTTGCCCTTCCTGAATACCCCGAGGGCGGCGTCGACTC
GAGCACTTACATGGCCTAGATGTCCCACGAAGAGGATCTCATCGACTACT
CCGACGAGGAGCTTCAGACCACTGACGCGGCGGCCACCACCGCTGCTCCC
GCCTCTAACGGAGAGGCTAAGAAGGGCGACTTGACGGTTTCTGGCGGCCG
TCCGGACAAGAAGGGTAGTTACGTCGGTATCCATTCGACCGGTTTCCGCG
ACTTTTTGCTCAAAGAGGAACTCCTACGTGCCATCACCGATTGCGGTTTC
GAACATCCATCGGAGGTCCAGCAAGTCTGCATTCCTACCGCCATTCTGAA
CGTCGATGTTCTCTGCCAGGCCAAGTCTGGTCTCGGAAAGACCGCGGTCT
TCGTTTTGACCACTCTGCACCAGCTGGAGCCGGTTCCTGGCGAGTGCTCT
ATCCTTGTTATGTGCCACACCCGCGAGTTGGCATACCAGATCAAGAACGA
GTACGCTCGTTTCAGCAAGTACCTTCCTGATGTCAAGACTGCTGTCTTCT
ACGGAGGTACCCCTATTCAGAAGGACGTTGAATTGCTATCCAACAAGGAG
TCCTACCCCAACATTGTTGTTGGTACTCCTGGTCGTCTGAACGCCTTGGT
CCGTGACAAGAAGCTTTCTCTGCGCAACGTCAAGGCTTTCGTTCTCGACG
AGTGTGATAAGATGCTGGACCAGATCGACATGCGTCGTGATGTCCAGGAG
ATCTTCCGTGCCACCCCTGCCGACAAGCAGGTTATGATGTTCAGTGCCAC
TCTTTCTCAGGAGATCCGCCCCGTGTGCAAGAAGTTCATGAGGAACCCTC
TCGAGGTCTACGTCGATGACGACACGAAGCTCACGCTGCACGGTCTGCAG
CAATATTACATTAAGCTCAGCGAAGCGGAGAAGAACCGCAAGCTGAACGA
GCTCCTGGATAGCCTGGAGTTCAACCAGGTTATCATCTTCGTCAAGAGCA
CCCTGCGTGCGAATGAGCTCGACAAGCTGTTGCGCGAGTGCAACTTCCCC
AGTATTGCGGTGCACTCTGGTGTGAGCCAGGAGGAGCGTATCAAACGCTA
CAAGGAGTTCAAGGAATTCAACAAGCGTATCTGTGTTGCGACCGACGTGT
TCGGACGTGGTATCGATATTGAGCGTATCAACCTTGCCATCAACTACGAC
TTGCCGGCTGATGCCGACTCCTACCTGCACCGTGTCGGTCGTGCGGGTCG
TTTCGGTACCAAGGGTCTGTCGATTTCTTTTGTCAGCACCGAGGATGACG
AGAAGGTGCTCAAGGACATCGAGAAGCGCTTCGAGGTTGCCCTTCCTGAA
TACCCCGAGGGCGGCGTCGACTCGAGCACTTACATGGCCTAGATGTCCCA
CGAAGAGGATCTCATCGACTACTCCGACGAGGAGCTTCAGACCACTGACG
CGGCGGCCACCACCGCTGCTCCCGCCTCTAACGGAGAGGCTAAGAAGGGC
GACTTGACGGTTTCTGGCGGCCGTCCGGACAAGAAGGGTAGTTACGTCGG
TATCCATTCGACCGGTTTCCGCGACTTTTTGCTCAAAGAGGAACTCCTAC
GTGCCATCACCGATTGCGGTTTCGAACATCCATCGGAGGTCCAGCAAGTC
TGCATTCCTACCGCCATTCTGAACGTCGATGTTCTCTGCCAGGCCAAGTC
TGGTCTCGGAAAGACCGCGGTCTTCGTTTTGACCACTCTGCACCAGCTGG
AGCCGGTTCCTGGCGAGTGCTCTATCCTTGTTATGTGCCACACCCGCGAG
TTGGCATACCAGATCAAGAACGAGTACGCTCGTTTCAGCAAGTACCTTCC
TGATGTCAAGACTGCTGTCTTCTACGGAGGTACCCCTATTCAGAAGGACG
TTGAATTGCTATCCAACAAGGAGTCCTACCCCAACATTGTTGTTGGTACT
CCTGGTCGTCTGAACGCCTTGGTCCGTGACAAGAAGCTTTCTCTGCGCAA
CGTCAAGGCTTTCGTTCTCGACGAGTGTGATAAGATGCTGGACCAGATCG
ACATGCGTCGTGATGTCCAGGAGATCTTCCGTGCCACCCCTGCCGACAAG
CAGGTTATGATGTTCAGTGCCACTCTTTCTCAGGAGATCCGCCCCGTGTG
CAAGAAGTTCATGAGGAACCCTCTCGAGGTCTACGTCGATGACGACACGA
AGCTCACGCTGCACGGTCTGCAGCAATATTACATTAAGCTCAGCGAAGCG
GAGAAGAACCGCAAGCTGAACGAGCTCCTGGATAGCCTGGAGTTCAACCA
GGTTATCATCTTCGTCAAGAGCACCCTGCGTGCGAATGAGCTCGACAAGC
TGTTGCGCGAGTGCAACTTCCCCAGTATTGCGGTGCACTCTGGTGTGAGC
CAGGAGGAGCGTATCAAACGCTACAAGGAGTTCAAGGAATTCAACAAGCG
TATCTGTGTTGCGACCGACGTGTTCGGACGTGGTATCGATATTGAGCGTA
TCAACCTTGCCATCAACTACGACTTGCCGGCTGATGCCGACTCCTACCTG
CACCGTGTCGGTCGTGCGGGTCGTTTCGGTACCAAGGGTCTGTCGATTTC
TTTTGTCAGCACCGAGGATGACGAGAAGGTGCTCAAGGACATCGAGAAGC
GCTTCGAGGTTGCCCTTCCTGAATACCCCGAGGGCGGCGTCGACTCGAGC
ACTTACATGGCCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SUB2KJC3_003280Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003280-T1KJC3_003280-T1-proteinAspergillus niger KJC3polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003280-T1.exon1KJC3_003280-T1.exon1Aspergillus niger KJC3exon
KJC3_003280-T1.exon2KJC3_003280-T1.exon2Aspergillus niger KJC3exon
KJC3_003280-T1.exon3KJC3_003280-T1.exon3Aspergillus niger KJC3exon
KJC3_003280-T1.exon4KJC3_003280-T1.exon4Aspergillus niger KJC3exon
KJC3_003280-T1.exon5KJC3_003280-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003280-T1.cdsKJC3_003280-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
NoteBUSCO:EOG09262E4Q
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
ProductSuppressor of the cold-sensitive snRNP bioproteinsis mutant brr1-1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1513234..1515306 +
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