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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1572720..1574098- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003303-T1 ID=KJC3_003303-T1|Name=KJC3_003303-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1379bp|location=Sequence derived from alignment at ch3:1572720..1574098- (Aspergillus niger KJC3)
GCTCTTACCCGCTCGGAAGCAAGTCTTGCATGAGTATAAAACCATCGAGG
GTTCCTGTGTAGCATCTATCCCACGGCACTTTCGCTCTTCAGATCGCCCC
GATTCCTCAATCTTCACCACCATGAAGCTCCCTATCCTCTACCTCGCATC
TCTTGCGCCCTTGGTCGCCGCCCACTTCGAGCTCAAGTACCCTACCAGCC
GTGATGGATCTGAAGAGGAGATGACCCAATTCCCCTGCGGTGGAGCTGCC
CAGTCCAGCAACCGTACACAGGTGTCTATCTCCGCCGGTTCTTTCCCAGT
CGCATTGTCCATGGGCCATTCCCAGACTGCTGTCGAGGTCCTCCTGGCAC
TGGGTTCCGATCCCGGAACCAACTACAACATTACCCTTCATCAGACCTTT
GAAATCCAGGGATTGGGTGCTTTCTGCCTTCCGCACATCAAGTTCGACGA
ATCCATCCTCGGCACCAACATCACCGACGGAATGAACGCAACCGTGCAGG
TCCAGAGTAATGGTGACCCCACCGGAGGCCTCTACGCTGTATGTTGCCCT
GTCGATTACTCGGTGTGAGAAGATGCTAACTTCGCCCAGTGCGCCGACAT
CCAGTTCTCCTCGACCGTCGATTACGAAGAACCGTCCTCCTGCTCGAACA
ACACCGGTGTGACTGCTGTGGCCTTCACTGGAGCTGCAGCAGAGCGCAAC
GCCAATGAATCCACTGCCTCTGGAGAAGCGCAGAGCAGCTCCTCTTCTAG
CACTTCTTCGGGCAGTTCAACCGCTGCGACCTCCACTGGTGGTGCTGTTG
CTTTGGAGACTGCTGCGTGGGGTATGCTGGGCGCTGCAGTTGTTGGTGGA
ATGGCTCTGTTGTAAGAGATAGGGCCAAATACCACAACTGTCTATGTTGT
ATTATGCAACCTGGTACACCGGGAGATGAACTGGGCTCGAACCTACCTTG
CCTTCTCATGTTTATTCTTCTAGCGTTGAGGGTCTACGAGAATAACATCA
TATTCGGGCTTCTGGATTGTCCCTCACCGACAATTCCATTGCCTCGATTA
CATCTTGTCGCCGTATTACTCCCATGTGCGCAAGATTATCCAATTCATGT
ACCAAATTATGGAGCCATATATTGTGATCACTAGTGTGTCCGAACTCCGA
ACGCACATCTTGGATATACATTCTCGGGTTCCCAAGCTCAACTTGTCGAG
GTGAAAGTGCAGCATACGTTTTATGATTTATGAAATACCCATTGTAACTA
GCGAGAGCCAATAATCAAAGCGAAATTACTCAAATCACTGGAAATAAATC
TCAAAATAGTTGTATTCTGGCATTGTATCGTCTTGTTATTTACCATGTGT
ATATTCAATACCTGGTGTCATACCGTCGC back to topCoding sequence (CDS) from alignment at ch3:1572720..1574098- >KJC3_003303-T1 ID=KJC3_003303-T1|Name=KJC3_003303-T1|organism=Aspergillus niger KJC3|type=CDS|length=1386bp|location=Sequence derived from alignment at ch3:1572720..1574098- (Aspergillus niger KJC3)
TGCGCCGACATCCAGTTCTCCTCGACCGTCGATTACGAAGAACCGTCCTC
CTGCTCGAACAACACCGGTGTGACTGCTGTGGCCTTCACTGGAGCTGCAG
CAGAGCGCAACGCCAATGAATCCACTGCCTCTGGAGAAGCGCAGAGCAGC
TCCTCTTCTAGCACTTCTTCGGGCAGTTCAACCGCTGCGACCTCCACTGG
TGGTGCTGTTGCTTTGGAGACTGCTGCGTGGGGTATGCTGGGCGCTGCAG
TTGTTGGTGGAATGGCTCTGTTGTAAATGAAGCTCCCTATCCTCTACCTC
GCATCTCTTGCGCCCTTGGTCGCCGCCCACTTCGAGCTCAAGTACCCTAC
CAGCCGTGATGGATCTGAAGAGGAGATGACCCAATTCCCCTGCGGTGGAG
CTGCCCAGTCCAGCAACCGTACACAGGTGTCTATCTCCGCCGGTTCTTTC
CCAGTCGCATTGTCCATGGGCCATTCCCAGACTGCTGTCGAGGTCCTCCT
GGCACTGGGTTCCGATCCCGGAACCAACTACAACATTACCCTTCATCAGA
CCTTTGAAATCCAGGGATTGGGTGCTTTCTGCCTTCCGCACATCAAGTTC
GACGAATCCATCCTCGGCACCAACATCACCGACGGAATGAACGCAACCGT
GCAGGTCCAGAGTAATGGTGACCCCACCGGAGGCCTCTACGCTTGCGCCG
ACATCCAGTTCTCCTCGACCGTCGATTACGAAGAACCGTCCTCCTGCTCG
AACAACACCGGTGTGACTGCTGTGGCCTTCACTGGAGCTGCAGCAGAGCG
CAACGCCAATGAATCCACTGCCTCTGGAGAAGCGCAGAGCAGCTCCTCTT
CTAGCACTTCTTCGGGCAGTTCAACCGCTGCGACCTCCACTGGTGGTGCT
GTTGCTTTGGAGACTGCTGCGTGGGGTATGCTGGGCGCTGCAGTTGTTGG
TGGAATGGCTCTGTTGTAAATGAAGCTCCCTATCCTCTACCTCGCATCTC
TTGCGCCCTTGGTCGCCGCCCACTTCGAGCTCAAGTACCCTACCAGCCGT
GATGGATCTGAAGAGGAGATGACCCAATTCCCCTGCGGTGGAGCTGCCCA
GTCCAGCAACCGTACACAGGTGTCTATCTCCGCCGGTTCTTTCCCAGTCG
CATTGTCCATGGGCCATTCCCAGACTGCTGTCGAGGTCCTCCTGGCACTG
GGTTCCGATCCCGGAACCAACTACAACATTACCCTTCATCAGACCTTTGA
AATCCAGGGATTGGGTGCTTTCTGCCTTCCGCACATCAAGTTCGACGAAT
CCATCCTCGGCACCAACATCACCGACGGAATGAACGCAACCGTGCAGGTC
CAGAGTAATGGTGACCCCACCGGAGGCCTCTACGCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003303-T1.utr3p1 | KJC3_003303-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003303-T1.utr5p1 | KJC3_003303-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-17) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1572720..1574098 - |
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