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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1593281..1594129+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003311-T1 ID=KJC3_003311-T1|Name=KJC3_003311-T1|organism=Aspergillus niger KJC3|type=mRNA|length=849bp|location=Sequence derived from alignment at ch3:1593281..1594129+ (Aspergillus niger KJC3)
ATGCCTCCCCTACGAACCAAAGTCTTCATCAACGTCGACCTCGGCGAGGG
CTACGGGAACTTCAAATGCGGCCCAGACGAAGAACTAATCCCCCTCATCG
ACCAGGCCAACGTAGCCTGCGGATTTCAGTAAGTAGCATAGCTATCCACC
GCGTCCCTTCAGCCACAAACCACCAAACCAAATCTAATCCCGAATTCCCT
TTTATTACCTAGTGCCGGTGACCCCCTCATCATGCAAGAGACCGTCTCCC
TATGCAAAAAGCACAACATAACCATCGGCGCCCACCCCGGCCTCCCCGAC
GTGCAAGGCTTCGGCCGCCGCGAAATGAAGCTCACAGCAGAAGAGCACAC
AGCCAACATAATATACCAAGTCGGGGCTTTGCAAGGCTTCCTAGCACGCG
AAAATATCCCCCTCCACCACGTCAAGCCGCACGGCGTGCTCTACGGCATG
ATGTGTCGCGATCTGGAAGTCGCACGGGCTGTAATAAGGGGAATACCTGC
TGGCGTGCCAGTGGTGGGCCTAGGAGGAACATACATGGAGCAGGCGGCGA
AGGAGCTCGGGGTGCCGTTTTGGGCGGAGCTGTTCGGGGATGTCAAGTAC
GGGCCCGATGGGATGCTGGTTATTGATCGGAAGAAGAAGCCATGGAAGAT
TGAGGATGTCAAGGCGCATGTGAGGCAGCAGGTGGAGGACTCATCGGCGA
CGGCTGTTGATGGGTCGGTGGTGCAGATGGGGGTCAAGGATTACCCGGTG
ACGATTTGTTGTCATTCGGATTCGCCGGGGTGTTTGGAGATTGTGAGGGC
TACAAGGGAGGTGGTTGATGAGTTTAATAAGGCGAATGGGTTTGCCTGA back to topCoding sequence (CDS) from alignment at ch3:1593281..1594129+ >KJC3_003311-T1 ID=KJC3_003311-T1|Name=KJC3_003311-T1|organism=Aspergillus niger KJC3|type=CDS|length=1530bp|location=Sequence derived from alignment at ch3:1593281..1594129+ (Aspergillus niger KJC3)
ATGCCTCCCCTACGAACCAAAGTCTTCATCAACGTCGACCTCGGCGAGGG
CTACGGGAACTTCAAATGCGGCCCAGACGAAGAACTAATCCCCCTCATCG
ACCAGGCCAACGTAGCCTGCGGATTTCATGCCGGTGACCCCCTCATCATG
CAAGAGACCGTCTCCCTATGCAAAAAGCACAACATAACCATCGGCGCCCA
CCCCGGCCTCCCCGACGTGCAAGGCTTCGGCCGCCGCGAAATGAAGCTCA
CAGCAGAAGAGCACACAGCCAACATAATATACCAAGTCGGGGCTTTGCAA
GGCTTCCTAGCACGCGAAAATATCCCCCTCCACCACGTCAAGCCGCACGG
CGTGCTCTACGGCATGATGTGTCGCGATCTGGAAGTCGCACGGGCTGTAA
TAAGGGGAATACCTGCTGGCGTGCCAGTGGTGGGCCTAGGAGGAACATAC
ATGGAGCAGGCGGCGAAGGAGCTCGGGGTGCCGTTTTGGGCGGAGCTGTT
CGGGGATGTCAAGTACGGGCCCGATGGGATGCTGGTTATTGATCGGAAGA
AGAAGCCATGGAAGATTGAGGATGTCAAGGCGCATGTGAGGCAGCAGGTG
GAGGACTCATCGGCGACGGCTGTTGATGGGTCGGTGGTGCAGATGGGGGT
CAAGGATTACCCGGTGACGATTTGTTGTCATTCGGATTCGCCGGGGTGTT
TGGAGATTGTGAGGGCTACAAGGGAGGTGGTTGATGAGTTTAATAAGGCG
AATGGGTTTGCCTGAATGCCTCCCCTACGAACCAAAGTCTTCATCAACGT
CGACCTCGGCGAGGGCTACGGGAACTTCAAATGCGGCCCAGACGAAGAAC
TAATCCCCCTCATCGACCAGGCCAACGTAGCCTGCGGATTTCATGCCGGT
GACCCCCTCATCATGCAAGAGACCGTCTCCCTATGCAAAAAGCACAACAT
AACCATCGGCGCCCACCCCGGCCTCCCCGACGTGCAAGGCTTCGGCCGCC
GCGAAATGAAGCTCACAGCAGAAGAGCACACAGCCAACATAATATACCAA
GTCGGGGCTTTGCAAGGCTTCCTAGCACGCGAAAATATCCCCCTCCACCA
CGTCAAGCCGCACGGCGTGCTCTACGGCATGATGTGTCGCGATCTGGAAG
TCGCACGGGCTGTAATAAGGGGAATACCTGCTGGCGTGCCAGTGGTGGGC
CTAGGAGGAACATACATGGAGCAGGCGGCGAAGGAGCTCGGGGTGCCGTT
TTGGGCGGAGCTGTTCGGGGATGTCAAGTACGGGCCCGATGGGATGCTGG
TTATTGATCGGAAGAAGAAGCCATGGAAGATTGAGGATGTCAAGGCGCAT
GTGAGGCAGCAGGTGGAGGACTCATCGGCGACGGCTGTTGATGGGTCGGT
GGTGCAGATGGGGGTCAAGGATTACCCGGTGACGATTTGTTGTCATTCGG
ATTCGCCGGGGTGTTTGGAGATTGTGAGGGCTACAAGGGAGGTGGTTGAT
GAGTTTAATAAGGCGAATGGGTTTGCCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011330 |
| DBxref | InterPro:IPR005501 |
| DBxref | PFAM:PF03746 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1593281..1594129 + |
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