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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1630425..1631065- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003322-T1 ID=KJC3_003322-T1|Name=KJC3_003322-T1|organism=Aspergillus niger KJC3|type=mRNA|length=641bp|location=Sequence derived from alignment at ch3:1630425..1631065- (Aspergillus niger KJC3)
CTGTGATCAGCTTCAAGCTCCCATTATCGGTCCCTGACCCCTCCGTCGCC
CCCAATTGATACCCTGTGCCGATTTTTACGGGGCTAATTTTTGTTGTTGA
CTTTCGTTGCGAACTCCGGTCCTCCCGTCTATCACGATCTTCCCCCACAA
TGTCGTCCAAGTACGTCTTCACCAAGGGTCTGAAGGAGCTGCGCTTCCTT
TTCTGCCAGACCTCTCAGGCTAGTGCTGCTACTCGGTGAGTCTCCAATGT
ACCCATTTGCTATCATTCTAGGGAGTTACTGACAACTGGTATCTGTAGCT
CGTTCTTGCAGCGCGCATACCCGACCATGAAGAAGCACAACCCTTACACC
CCCATCCTGATGCGCGAGGCAGCTGGTACTGTGCCTAGGGTGTACGCCAG
ATACGGTACGACAAAGTTCTCGAAACGACACCAATGATGGATGATTACAT
GGCTAATAATCTCGCAGCTTTCGGCCAAGAGAAGCAGGAAGCTCTGACCG
GTAAGATTCTTGAGCGGAGAATATAAAGGCAAAACTGACCATGCTATTCC
CCCAGGCTTGACGGATCAGCAGATCGAAGAGAAGATCACTCAGTTGGTGA
AGGCGTCTTCATAGCGAAATCACGACGCGTCCGTATATGTT back to topCoding sequence (CDS) from alignment at ch3:1630425..1631065- >KJC3_003322-T1 ID=KJC3_003322-T1|Name=KJC3_003322-T1|organism=Aspergillus niger KJC3|type=CDS|length=1140bp|location=Sequence derived from alignment at ch3:1630425..1631065- (Aspergillus niger KJC3)
GCTTGACGGATCAGCAGATCGAAGAGAAGATCACTCAGTTGGTGAAGGCG
TCTTCATAGCTTTCGGCCAAGAGAAGCAGGAAGCTCTGACCGCTCGTTCT
TGCAGCGCGCATACCCGACCATGAAGAAGCACAACCCTTACACCCCCATC
CTGATGCGCGAGGCAGCTGGTACTGTGCCTAGGGTGTACGCCAGATACGA
TGTCGTCCAAGTACGTCTTCACCAAGGGTCTGAAGGAGCTGCGCTTCCTT
TTCTGCCAGACCTCTCAGGCTAGTGCTGCTACTCGGCTTGACGGATCAGC
AGATCGAAGAGAAGATCACTCAGTTGGTGAAGGCGTCTTCATAGCTTTCG
GCCAAGAGAAGCAGGAAGCTCTGACCGCTCGTTCTTGCAGCGCGCATACC
CGACCATGAAGAAGCACAACCCTTACACCCCCATCCTGATGCGCGAGGCA
GCTGGTACTGTGCCTAGGGTGTACGCCAGATACGATGTCGTCCAAGTACG
TCTTCACCAAGGGTCTGAAGGAGCTGCGCTTCCTTTTCTGCCAGACCTCT
CAGGCTAGTGCTGCTACTCGGCTTGACGGATCAGCAGATCGAAGAGAAGA
TCACTCAGTTGGTGAAGGCGTCTTCATAGCTTTCGGCCAAGAGAAGCAGG
AAGCTCTGACCGCTCGTTCTTGCAGCGCGCATACCCGACCATGAAGAAGC
ACAACCCTTACACCCCCATCCTGATGCGCGAGGCAGCTGGTACTGTGCCT
AGGGTGTACGCCAGATACGATGTCGTCCAAGTACGTCTTCACCAAGGGTC
TGAAGGAGCTGCGCTTCCTTTTCTGCCAGACCTCTCAGGCTAGTGCTGCT
ACTCGGCTTGACGGATCAGCAGATCGAAGAGAAGATCACTCAGTTGGTGA
AGGCGTCTTCATAGCTTTCGGCCAAGAGAAGCAGGAAGCTCTGACCGCTC
GTTCTTGCAGCGCGCATACCCGACCATGAAGAAGCACAACCCTTACACCC
CCATCCTGATGCGCGAGGCAGCTGGTACTGTGCCTAGGGTGTACGCCAGA
TACGATGTCGTCCAAGTACGTCTTCACCAAGGGTCTGAAGGAGCTGCGCT
TCCTTTTCTGCCAGACCTCTCAGGCTAGTGCTGCTACTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003322-T1.utr3p1 | KJC3_003322-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003322-T1.utr5p1 | KJC3_003322-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016464 |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR007741 |
| DBxref | PFAM:PF05047 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1630425..1631065 - |
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