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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1679803..1680899+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003345-T1 ID=KJC3_003345-T1|Name=KJC3_003345-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1097bp|location=Sequence derived from alignment at ch3:1679803..1680899+ (Aspergillus niger KJC3)
CCCAACCACTTCCATCTCACAAACTACACAGCCAACAACACTATACCACT
CCCGTCCTAGACAGACCGTCCCTCCTCTCCCAAGCCATTCCCCAACACAC
CACACCACACCACACCTCTCTTACCCACCCCCAACTCCCTATCTACTCAA
CCGCCACCACCACCATGCCCCCCCAAATAGCCTTCATATCCGGCCCAATC
GACACCGGCCCCAACGAATCCTACTTCCACACGCACTACCCCCCGCTCCT
CACCGCCGCCATCGCTCGCAATGACTCCTTCGTCCTCGGCCCCCTCCCCT
ACGGCGTCGACTCTGATGCCCTCTCCTACCTCCTCCAGTACCCAGTCTCT
CCCGCCCGCATCACCATCTTCGTGACCTCACGCGAGGACAGCCTCTGGGG
AATGCAGTTTCGCGCGCTCGGGGTCAATGTGCATGTTGTCGAGGGGGATA
GTACCCACGATCGGGACGTCGCTATGACTGCCGCCAGTACGTATGATATC
CTGAGGATCAGGACGGAGGAGGAGGCGAAGCAGATGTATGGGAGGTTGTG
GAGGGAGGGGTACGTGACGAATACGGAGAGGAACTGGAGGAGGAGGAGGG
GAGTGGGGGAGGATGAGAGGGTGGAAGCGGAGGTGGTTAACGGAGTGTTG
GGGGTGAATGGGGGGAAGAAGAAGAAGAAGAGGTTTTTGGGGAAGGTTTT
GGGGAGGTGATACATATTGTTCTTTATTTGGCTGTATCTAGATGTAGGGG
TTGTGTTGTGTATGTGTGCATTGCTGATACAAGGGAGACACATGTTGTGC
TACTTGGTAGCCCTAATTCGGGAATTTAAACACAATCTTGACACCATTTC
CCCAACAATGTCCCAGTAATCGGTCCCAAGGATGAAAATCTAAGACTAAC
CATCCGAGCCTGTGTCGTTTCCACCGGCGGAAGCCACCGCACACCCAGGA
GGAGAAAACCGGGTTTCATCGTTAGTGTCATTGCGGCTTGCTTCGCACAA
CTGGGTTAGACTCTAACCCGTAGACCCCGACGAATGTAGGATAGGGCATT
TCTCATTCTGCAGCTCAGCAAACGATCCATTGAAGTGATAGTGCTCT back to topCoding sequence (CDS) from alignment at ch3:1679803..1680899+ >KJC3_003345-T1 ID=KJC3_003345-T1|Name=KJC3_003345-T1|organism=Aspergillus niger KJC3|type=CDS|length=546bp|location=Sequence derived from alignment at ch3:1679803..1680899+ (Aspergillus niger KJC3)
ATGCCCCCCCAAATAGCCTTCATATCCGGCCCAATCGACACCGGCCCCAA
CGAATCCTACTTCCACACGCACTACCCCCCGCTCCTCACCGCCGCCATCG
CTCGCAATGACTCCTTCGTCCTCGGCCCCCTCCCCTACGGCGTCGACTCT
GATGCCCTCTCCTACCTCCTCCAGTACCCAGTCTCTCCCGCCCGCATCAC
CATCTTCGTGACCTCACGCGAGGACAGCCTCTGGGGAATGCAGTTTCGCG
CGCTCGGGGTCAATGTGCATGTTGTCGAGGGGGATAGTACCCACGATCGG
GACGTCGCTATGACTGCCGCCAGTACGTATGATATCCTGAGGATCAGGAC
GGAGGAGGAGGCGAAGCAGATGTATGGGAGGTTGTGGAGGGAGGGGTACG
TGACGAATACGGAGAGGAACTGGAGGAGGAGGAGGGGAGTGGGGGAGGAT
GAGAGGGTGGAAGCGGAGGTGGTTAACGGAGTGTTGGGGGTGAATGGGGG
GAAGAAGAAGAAGAAGAGGTTTTTGGGGAAGGTTTTGGGGAGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003345-T1.utr5p1 | KJC3_003345-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003345-T1.utr3p1 | KJC3_003345-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.4 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1679803..1680899 + |
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