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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1680997..1681750- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003346-T1 ID=KJC3_003346-T1|Name=KJC3_003346-T1|organism=Aspergillus niger KJC3|type=mRNA|length=754bp|location=Sequence derived from alignment at ch3:1680997..1681750- (Aspergillus niger KJC3)
CTGGAAGGCTTACTATTTCCTATTGAGGCAAATATGGACGCCTCCCGCAA
ATACCCTACTCTGTACCTTCCCCCTCGATCATGACTACGTGGAGATTTGT
CCAGAGTAGGCTCTTGTGATCTCTGTCTTGAACTCACGGGCATCAGGACA
AATTTATAAGAAGCGTCTGTATCTCCTCTCATTGTCTCTACCTCAGTACT
TCGTCTCTCCGTCTATCCCAAAAAGTTAGAAAATTCACCACTTATCGAGC
CTCACATAATCGCATGATGAATCAGTCCGCCACCGCTGCACCGTGGGCAC
AAGGTGCTGAAAAGTACCGCGGAAAGCATTGCTTCCCACTCGCCATCGAT
TACTTTGCGCATCAGGAACCTGAACGCATCTTTGCTTGCATCCCAATTTC
CAGTGATGTTGCCGATGGCTTTCGCAATGTGACTGAGCAGGACATGGCCG
CAGCCGTGAATCGGATGGCCCGGTGGACGGAGCAGACCTTTCGTCAGGCT
CTTCATCTTAATCCACGTCAGTAGGTCTTGGCCTACATCGGCCCGTCGGA
TCTGCGGTGTGCTATCCTTTTGATGGCTGCGATCATGTGTGGCACCAAGG
TGAGGGCACCCATCAATATTGCAGGATAGGTCCTTCATTGAGCCTTTCTG
ACAGTATATTTCTGGTACAGATCCTGTTTATGTCACCAAGAAACACCTTG
GAGCAGAACAATGCTTTGCTAGAAATAGCAAAGGTGGATCTTGTCCTCTA
TTGA back to topCoding sequence (CDS) from alignment at ch3:1680997..1681750- >KJC3_003346-T1 ID=KJC3_003346-T1|Name=KJC3_003346-T1|organism=Aspergillus niger KJC3|type=CDS|length=1053bp|location=Sequence derived from alignment at ch3:1680997..1681750- (Aspergillus niger KJC3)
ATCCTGTTTATGTCACCAAGAAACACCTTGGAGCAGAACAATGCTTTGCT
AGAAATAGCAAAGGTGGATCTTGTCCTCTATTGAGTCTTGGCCTACATCG
GCCCGTCGGATCTGCGGTGTGCTATCCTTTTGATGGCTGCGATCATGTGT
GGCACCAAGATGATGAATCAGTCCGCCACCGCTGCACCGTGGGCACAAGG
TGCTGAAAAGTACCGCGGAAAGCATTGCTTCCCACTCGCCATCGATTACT
TTGCGCATCAGGAACCTGAACGCATCTTTGCTTGCATCCCAATTTCCAGT
GATGTTGCCGATGGCTTTCGCAATGTGACTGAGCAGGACATGGCCGCAGC
CATCCTGTTTATGTCACCAAGAAACACCTTGGAGCAGAACAATGCTTTGC
TAGAAATAGCAAAGGTGGATCTTGTCCTCTATTGAGTCTTGGCCTACATC
GGCCCGTCGGATCTGCGGTGTGCTATCCTTTTGATGGCTGCGATCATGTG
TGGCACCAAGATGATGAATCAGTCCGCCACCGCTGCACCGTGGGCACAAG
GTGCTGAAAAGTACCGCGGAAAGCATTGCTTCCCACTCGCCATCGATTAC
TTTGCGCATCAGGAACCTGAACGCATCTTTGCTTGCATCCCAATTTCCAG
TGATGTTGCCGATGGCTTTCGCAATGTGACTGAGCAGGACATGGCCGCAG
CCATCCTGTTTATGTCACCAAGAAACACCTTGGAGCAGAACAATGCTTTG
CTAGAAATAGCAAAGGTGGATCTTGTCCTCTATTGAGTCTTGGCCTACAT
CGGCCCGTCGGATCTGCGGTGTGCTATCCTTTTGATGGCTGCGATCATGT
GTGGCACCAAGATGATGAATCAGTCCGCCACCGCTGCACCGTGGGCACAA
GGTGCTGAAAAGTACCGCGGAAAGCATTGCTTCCCACTCGCCATCGATTA
CTTTGCGCATCAGGAACCTGAACGCATCTTTGCTTGCATCCCAATTTCCA
GTGATGTTGCCGATGGCTTTCGCAATGTGACTGAGCAGGACATGGCCGCA
GCC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003346-T1.utr5p1 | KJC3_003346-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.4 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1680997..1681750 - |
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