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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1766235..1769007+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_003375-T1 ID=KJC3_003375-T1|Name=KJC3_003375-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2773bp|location=Sequence derived from alignment at ch3:1766235..1769007+ (Aspergillus niger KJC3)
ATGCTACCTGAATTCCTGCAGAGTAGCTATGCCCGCTACAAAGCAGACAC
CAATACCTTCGCAACATGGCTACTAGAGACTGCCAACAAGTGTGGCTATG
AACCTACCCTTTCTGCTACCGTCCCTCCCGTGAACAAGAGCAAGCGTAGG
GGTAAACCGGATGGCTCGAACGAGCATCCAATTCAATACAGTGCTACTAC
CAAAGACCTACAAAAGTTCGCCGAGGTAATTGCCGGTTCTTCTCTCAGCG
TGCCGAGATCAGTCCTCACCATCGCGAAACGCGCCATCAAATTGAGGAAA
ACAGTCACTTCATGGTTCTTGGGTCGGGGCGACATCGCGAACAATAAGCG
ACATGCTCATTTATCACTGCGCTGGAGCAAATCTGCGAGAATCTTGAATG
GAAGACCACCGAGCCCTCCAAGCCAGATGCTAAGCAGCCACAGTCAGCGC
CTGAGGCTCACGATGACGACGCCGATGCTGACAGGTTCTTAAATAAGTTT
GCTGTCCTCACGGTAGAGGAACCTGAGGATATCCCAGAAACTAAATCGGC
ACCCGCAGAATCAAAGAAGATTGTCAAGGTCACCGTGGTGGAAGACGACA
ATGAAGCGGCCGACTCCTATCTTGGCCACTTGTTCTTCAAGACCCTGTGT
TTACTCCAGGACTTGGAAAACATGCGGAAGTTTATTTCCATCACCTGGTC
GGAGTACCGGGATAGGAAAATCGACCTTATGAACGCCGCTATCGTGACGG
ACAATGCGTTGCAACTTGCCCAAGATATGGTGAAGGAGGTCGAGGCTGAC
TGGCTCGCTACTCGTACTTCGCAGAAAGATGATATTCAGAACCTTGTCTA
CAATCTCGCTGTTATTCGTCGGGGCATCTCCGCGGCTCCATCCACGGAGA
TTGGCCTGCCATACAACAAGAACATGGCTGATGTAGCTGACTGGTGCTAC
GTGCCAACTAGGGTTTTGCTCGACGCCTTTGCTAATGTTCTCCAGGACAA
TCACCAACCAGTCTTTAAAAAGGGCTACTTCGGTACATATAACCCAAAGG
CGGACAGAGCGCGGATGTCTGTGGGCCAGAAATTCAACGAAGACAAAATC
ATTCTTCTTTCGATTCTGCCAGAGTTTTGCATGTTTGATACCTTCAAATT
CAAGACGCCTACTTCGGACGCGATCACGAAAGGTCTCGTTGAGTTTTCCA
GGAACAAAAAGGTTACTCTATGGCTCTGCTTTGCCTCCCAGGTCTTTCTC
GACATCCATCATATCATGCGACACAGTACCCTGGGTGCCTTTGGAGACCT
TCGCATGTCGGGACTGCGCATTCAGAAGATCATTGATGAGTACCTGAAAT
TGTCCAAGACACATCCCCAGCCCAAATTTTGGCCAAAGGAGGGCGACGAG
GAAATTCAAAGTATAAGTGCCACTGTGGATTCCTGGATTATACAAGACGC
GTTCCTCAATTTGCGGGTCCTGTCTGGACTTGACAAAACTGGCTCAGCCC
CTGAAAAGCATGCACTCTTATCGCAGCACCCTGTCCTTTGCGGACTGATC
CTATTCCACCTCAATATTAGAATGCAGTATGTGGGCCAGAAGCTTGTCAC
CCAATGGTATGACGTCCAACAGCTGGCTTTCTTGCACAACCTCGTTATAC
AGTATGCAACGCACAAGGACGTGAGATGGCCCGATATGGATGCTTTCATC
AAGATCCATGGCGAGTCTCATATCTTCATTGGTTCGCGTCCAAAGACCGC
CGGTGAATCTCTAAACAGGCTTGAATTGGCCACAGGCGTCTCATCCGTTG
CCAATTTTGCCCGCGATTCCCGGAGTAGACCTTTTCATAAGCCCGATGGC
AAGAATCCGCGCTTGCTCAAGCCCACCACTGCAGTTGCGAACTTGTTCTC
CTCCAAGTATGTTGAGGGTCTCGCGGAAGATGCCGGGATCGTCCACATTG
ACCGGATCCTGGACGAGCTCTCACAGCAATCTAAGCTTGAATCATCATCT
TGCAAAGAGCTCCACAGAGCTAATGCAGAACTCTCGATTACCCGAAAGTG
GTCTAACACCCGCAACATTGACACGCTCCACCTTTTGGCTTTCCTAAAGA
CCAAGCTTTACGAAGAGGAGCCTGTCATCTTGTACAACTACTTCGGCATG
CACAAACGTTCCATCGAGTTACTCCGACTGATCCGACAGAAAGAACACCA
CAAATTTGTTCAATATTTCACAGCCGGGTACATGGACGATGAGTCCTTCA
TCTCCAACATTGTCTTTCTCATCCACCACGTCGCACGAGGCTCGGCCCAA
AACGCACGTGCGATGGGACTTGGATCCGGGGACGTGGAGTTAGTGAGTCG
CATTGTCATGAGCTCTGGCGACGTCATGCGTGAATACTTGAAGAAAAACG
GTGATGTGGCGTGTAAAGAGCTGAGAGTGTTTTGCAAGAACAAAAAGCCC
ATTCAAGATGAGGTTGCTGACGATGCGGGTGAATCGGACGGGCTGGTGAC
GTCTTGGCTGCACCTTGAGGATGTTCTGGGTCCGAAGGGCGTGGCCTCGC
TTATGACGGGGATCCCGATGGCTTAGTCTCCGACTCTCTCAGGGCACCGA
CCAAATGCCGACTTCATGCCAAGAAATCCCGCCCCGTCCATTTGAAATCT
CTGCCTCATTTGTTCCCGCCAACATATTATGACTCAAACTTTCCATTTTC
AGGGTTGAGCAAGGATATGGCCATGGGCTCTAACGATAATAATGTCTTAA
ATCCTTTGGCGCGCGCCTATCTT back to topCoding sequence (CDS) from alignment at ch3:1766235..1769007+ >KJC3_003375-T1 ID=KJC3_003375-T1|Name=KJC3_003375-T1|organism=Aspergillus niger KJC3|type=CDS|length=4794bp|location=Sequence derived from alignment at ch3:1766235..1769007+ (Aspergillus niger KJC3)
ATGCTACCTGAATTCCTGCAGAGTAGCTATGCCCGCTACAAAGCAGACAC
CAATACCTTCGCAACATGGCTACTAGAGACTGCCAACAAGTGTGGCTATG
AACCTACCCTTTCTGCTACCGTCCCTCCCGTGAACAAGAGCAAGCGTAGG
GGTAAACCGGATGGCTCGAACGAGCATCCAATTCAATACAGTGCTACTAC
CAAAGACCTACAAAAGTTCGCCGAGACCACCGAGCCCTCCAAGCCAGATG
CTAAGCAGCCACAGTCAGCGCCTGAGGCTCACGATGACGACGCCGATGCT
GACAGGTTCTTAAATAAGTTTGCTGTCCTCACGGTAGAGGAACCTGAGGA
TATCCCAGAAACTAAATCGGCACCCGCAGAATCAAAGAAGATTGTCAAGG
TCACCGTGGTGGAAGACGACAATGAAGCGGCCGACTCCTATCTTGGCCAC
TTGTTCTTCAAGACCCTGTGTTTACTCCAGGACTTGGAAAACATGCGGAA
GTTTATTTCCATCACCTGGTCGGAGTACCGGGATAGGAAAATCGACCTTA
TGAACGCCGCTATCGTGACGGACAATGCGTTGCAACTTGCCCAAGATATG
GTGAAGGAGGTCGAGGCTGACTGGCTCGCTACTCGTACTTCGCAGAAAGA
TGATATTCAGAACCTTGTCTACAATCTCGCTGTTATTCGTCGGGGCATCT
CCGCGGCTCCATCCACGGAGATTGGCCTGCCATACAACAAGAACATGGCT
GATGTAGCTGACTGGTGCTACGTGCCAACTAGGGTTTTGCTCGACGCCTT
TGCTAATGTTCTCCAGGACAATCACCAACCAGTCTTTAAAAAGGGCTACT
TCGGTACATATAACCCAAAGGCGGACAGAGCGCGGATGTCTGTGGGCCAG
AAATTCAACGAAGACAAAATCATTCTTCTTTCGATTCTGCCAGAGTTTTG
CATGTTTGATACCTTCAAATTCAAGACGCCTACTTCGGACGCGATCACGA
AAGGTCTCGTTGAGTTTTCCAGGAACAAAAAGGTTACTCTATGGCTCTGC
TTTGCCTCCCAGGTCTTTCTCGACATCCATCATATCATGCGACACAGTAC
CCTGGGTGCCTTTGGAGACCTTCGCATGTCGGGACTGCGCATTCAGAAGA
TCATTGATGAGTACCTGAAATTGTCCAAGACACATCCCCAGCCCAAATTT
TGGCCAAAGGAGGGCGACGAGGAAATTCAAAGTATAAGTGCCACTGTGGA
TTCCTGGATTATACAAGACGCGTTCCTCAATTTGCGGGTCCTGTCTGGAC
TTGACAAAACTGGCTCAGCCCCTGAAAAGCATGCACTCTTATCGCAGCAC
CCTGTCCTTTGCGGACTGATCCTATTCCACCTCAATATTAGAATGCAGTA
TGTGGGCCAGAAGCTTGTCACCCAATGGTATGACGTCCAACAGCTGGCTT
TCTTGCACAACCTCGTTATACAGTATGCAACGCACAAGGACGTGAGATGG
CCCGATATGGATGCTTTCATCAAGATCCATGGCGAGTCTCATATCTTCAT
TGGTTCGCGTCCAAAGACCGCCGGTGAATCTCTAAACAGGCTTGAATTGG
CCACAGGCGTCTCATCCGTTGCCAATTTTGCCCGCGATTCCCGGAGTAGA
CCTTTTCATAAGCCCGATGGCAAGAATCCGCGCTTGCTCAAGCCCACCAC
TGCAGTTGCGAACTTGTTCTCCTCCAAGTATGTTGAGGGTCTCGCGGAAG
ATGCCGGGATCGTCCACATTGACCGGATCCTGGACGAGCTCTCACAGCAA
TCTAAGCTTGAATCATCATCTTGCAAAGAGCTCCACAGAGCTAATGCAGA
ACTCTCGATTACCCGAAAGTGGTCTAACACCCGCAACATTGACACGCTCC
ACCTTTTGGCTTTCCTAAAGACCAAGCTTTACGAAGAGGAGCCTGTCATC
TTGTACAACTACTTCGGCATGCACAAACGTTCCATCGAGTTACTCCGACT
GATCCGACAGAAAGAACACCACAAATTTGTTCAATATTTCACAGCCGGGT
ACATGGACGATGAGTCCTTCATCTCCAACATTGTCTTTCTCATCCACCAC
GTCGCACGAGGCTCGGCCCAAAACGCACGTGCGATGGGACTTGGATCCGG
GGACGTGGAGTTAGTGAGTCGCATTGTCATGAGCTCTGGCGACGTCATGC
GTGAATACTTGAAGAAAAACGGTGATGTGGCGTGTAAAGAGCTGAGAGTG
TTTTGCAAGAACAAAAAGCCCATTCAAGATGAGGTTGCTGACGATGCGGG
TGAATCGGACGGGCTGGTGACGTCTTGGCTGCACCTTGAGGATGTTCTGG
GTCCGAAGGGCGTGGCCTCGCTTATGACGGGGATCCCGATGGCTTAGATG
CTACCTGAATTCCTGCAGAGTAGCTATGCCCGCTACAAAGCAGACACCAA
TACCTTCGCAACATGGCTACTAGAGACTGCCAACAAGTGTGGCTATGAAC
CTACCCTTTCTGCTACCGTCCCTCCCGTGAACAAGAGCAAGCGTAGGGGT
AAACCGGATGGCTCGAACGAGCATCCAATTCAATACAGTGCTACTACCAA
AGACCTACAAAAGTTCGCCGAGACCACCGAGCCCTCCAAGCCAGATGCTA
AGCAGCCACAGTCAGCGCCTGAGGCTCACGATGACGACGCCGATGCTGAC
AGGTTCTTAAATAAGTTTGCTGTCCTCACGGTAGAGGAACCTGAGGATAT
CCCAGAAACTAAATCGGCACCCGCAGAATCAAAGAAGATTGTCAAGGTCA
CCGTGGTGGAAGACGACAATGAAGCGGCCGACTCCTATCTTGGCCACTTG
TTCTTCAAGACCCTGTGTTTACTCCAGGACTTGGAAAACATGCGGAAGTT
TATTTCCATCACCTGGTCGGAGTACCGGGATAGGAAAATCGACCTTATGA
ACGCCGCTATCGTGACGGACAATGCGTTGCAACTTGCCCAAGATATGGTG
AAGGAGGTCGAGGCTGACTGGCTCGCTACTCGTACTTCGCAGAAAGATGA
TATTCAGAACCTTGTCTACAATCTCGCTGTTATTCGTCGGGGCATCTCCG
CGGCTCCATCCACGGAGATTGGCCTGCCATACAACAAGAACATGGCTGAT
GTAGCTGACTGGTGCTACGTGCCAACTAGGGTTTTGCTCGACGCCTTTGC
TAATGTTCTCCAGGACAATCACCAACCAGTCTTTAAAAAGGGCTACTTCG
GTACATATAACCCAAAGGCGGACAGAGCGCGGATGTCTGTGGGCCAGAAA
TTCAACGAAGACAAAATCATTCTTCTTTCGATTCTGCCAGAGTTTTGCAT
GTTTGATACCTTCAAATTCAAGACGCCTACTTCGGACGCGATCACGAAAG
GTCTCGTTGAGTTTTCCAGGAACAAAAAGGTTACTCTATGGCTCTGCTTT
GCCTCCCAGGTCTTTCTCGACATCCATCATATCATGCGACACAGTACCCT
GGGTGCCTTTGGAGACCTTCGCATGTCGGGACTGCGCATTCAGAAGATCA
TTGATGAGTACCTGAAATTGTCCAAGACACATCCCCAGCCCAAATTTTGG
CCAAAGGAGGGCGACGAGGAAATTCAAAGTATAAGTGCCACTGTGGATTC
CTGGATTATACAAGACGCGTTCCTCAATTTGCGGGTCCTGTCTGGACTTG
ACAAAACTGGCTCAGCCCCTGAAAAGCATGCACTCTTATCGCAGCACCCT
GTCCTTTGCGGACTGATCCTATTCCACCTCAATATTAGAATGCAGTATGT
GGGCCAGAAGCTTGTCACCCAATGGTATGACGTCCAACAGCTGGCTTTCT
TGCACAACCTCGTTATACAGTATGCAACGCACAAGGACGTGAGATGGCCC
GATATGGATGCTTTCATCAAGATCCATGGCGAGTCTCATATCTTCATTGG
TTCGCGTCCAAAGACCGCCGGTGAATCTCTAAACAGGCTTGAATTGGCCA
CAGGCGTCTCATCCGTTGCCAATTTTGCCCGCGATTCCCGGAGTAGACCT
TTTCATAAGCCCGATGGCAAGAATCCGCGCTTGCTCAAGCCCACCACTGC
AGTTGCGAACTTGTTCTCCTCCAAGTATGTTGAGGGTCTCGCGGAAGATG
CCGGGATCGTCCACATTGACCGGATCCTGGACGAGCTCTCACAGCAATCT
AAGCTTGAATCATCATCTTGCAAAGAGCTCCACAGAGCTAATGCAGAACT
CTCGATTACCCGAAAGTGGTCTAACACCCGCAACATTGACACGCTCCACC
TTTTGGCTTTCCTAAAGACCAAGCTTTACGAAGAGGAGCCTGTCATCTTG
TACAACTACTTCGGCATGCACAAACGTTCCATCGAGTTACTCCGACTGAT
CCGACAGAAAGAACACCACAAATTTGTTCAATATTTCACAGCCGGGTACA
TGGACGATGAGTCCTTCATCTCCAACATTGTCTTTCTCATCCACCACGTC
GCACGAGGCTCGGCCCAAAACGCACGTGCGATGGGACTTGGATCCGGGGA
CGTGGAGTTAGTGAGTCGCATTGTCATGAGCTCTGGCGACGTCATGCGTG
AATACTTGAAGAAAAACGGTGATGTGGCGTGTAAAGAGCTGAGAGTGTTT
TGCAAGAACAAAAAGCCCATTCAAGATGAGGTTGCTGACGATGCGGGTGA
ATCGGACGGGCTGGTGACGTCTTGGCTGCACCTTGAGGATGTTCTGGGTC
CGAAGGGCGTGGCCTCGCTTATGACGGGGATCCCGATGGCTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_003375-T1.utr3p1 | KJC3_003375-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_3.5 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:1766235..1769007 + |
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