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KJC3_003384-T1, KJC3_003384-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_003384-T1
Unique NameKJC3_003384-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:1787034..1788857-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_003384-T1 ID=KJC3_003384-T1|Name=KJC3_003384-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1824bp|location=Sequence derived from alignment at ch3:1787034..1788857- (Aspergillus niger KJC3)
ATGGCTGCCAACGCTTCGTCGAACGACACCTCCACCAGCGCCCATGCAAT
ATACACAAGAAGCTTCGCCGCTGGGCTAGAGCAAGACAACATGGCCCATG
CAACAGGAGAAGTCTCCTCTAAGGGGACAATCGCCAAAAAGCAGAGCAAC
AGATACGGTGACGAAGGGACCCAGCCAGCGACCACGAAAAAGTCTGTTCG
TTTCTTTGCGATCATCGCGGCACTCGCGCTCTCTGGGCTCTTAACTTCGT
TGGAGGCGACCATCACCTCCACTGCTCTGCCAACCATTACAGCAGACCTG
GGAGGTGCCAGTCTTTATGTATGGGTGGTCAATGGATTCTATCTTACTCA
GTAGGGACATCTCACTACACACACCGTGTCTCGTCTAACGTAAGATTGTT
ACAGGACAGCATTCCAGCCATTATTCGGTCAGATCGCCGATATTTACGGT
CGCCGATGGCCCATGATCATCAGCACCGCGACCTTCACCCTAGGCAGTGG
CCTCTCCGGCGGCGCCAGCAACATCGACATGCTAATTGCCGGGCGACTTA
TCCAAGGCATCGGTGCAGGCGGCATTAACGTACTCATCGAAATCATCGTC
TGCGATTTGCTTCCCCTCCGCGAACGAGGCCGCTACCTAGGCCTCATGTT
TGGTCTCATCGCTATCGGCACCACCCTCGGCCCTCTCTTCGGCGGCCTCA
TCGTCCAGTACACCACCTGGCGCTGGGTCTTCTACCTTAACGTCCCCATC
GGCGGGGCCGCCATGGTTACATTATTCCTTTTCCTCCACGTAAAGTCCGA
TCGCACCCCCGACTACCTGCAGCGCCTGAAACGCATCGACTGGCTTGGCA
ACACCCTCTTCGTCCTCTCCATGGTCTCTGTCCTGATCGCCCTTTCCTGG
GGCGGCAGCCAATACCCCTGGTCATCCTTCCGCGTCATCGTCCCTCTAGT
CCTCGGTTTCGCTGGCTTCGCCATCTTTTTACTCTATGAAGCTTCCCCGA
AGTACTGCCTCAACCCTACCATGCCGCTGCACCTGTTCGCTAACCGCACC
TCCGCCACGGCCTTTGGCCTCACCTTCTTGCACAGCCTCTCTGCTATCGC
AGTCATGTACTTCCTCCCTGTCTACTTCCAGGCTGTCCTTGCCGCATCCC
CGAGCCGCTCAGGCGTCCAACTCCTCCCTACGATCCTGTTCATGATCCCC
GCCGCCATCATCGCCGGCGGCTTACTCTCCAAGCTGGGCCGCTACCGTCC
CATCCAACATGCTGGCTTCGCCTTCATGATTATTGGTTTCGGGTTATTGA
CTCTACTAAACGCTCACGCGAGCACGGGCCAGTGGGTCGGATACCAAATC
CCCAGCGCGGTGGGGACGGGTCTCGCTCTCCCTGTCCTTCTTCCTGCTGT
GCAGGCGTCGCTCACGGAAGCGGATACGGCGCTCTCTACTTCGACGTGGG
CGTTTATTCGCAGTTTCGGGCTTATTTGGGGTGCGACGATTCCGACGGCG
GCGTTTAACAATCGAGTGAATGCGTTGTTGGGGAGAGTTAGCGACTTGAG
TGTTGCGGAGCAGTTGAGGGATGGGAAGGCATATGAGGCTGCTACGAAGG
CGTTTATGGATTCAATTACAGATGCGGTGACGCGGGCGCAGGTGGTGAGC
GTTTATGTGGATGCTATTAAGACGGTGTGGTATGTTTCAATGGCGTTTGC
GGGACTGGCGTTTTTGCTGGTTATTGTTGAAAAGGAAATTCCGTTGCGGA
AGGAGTTGGATACCAAGTTTAGTATGGAGGAGAAGGAGAAGGATGGAGAG
ACGGCGTATCAACAAGCCCCTTGA
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Coding sequence (CDS) from alignment at ch3:1787034..1788857-

>KJC3_003384-T1 ID=KJC3_003384-T1|Name=KJC3_003384-T1|organism=Aspergillus niger KJC3|type=CDS|length=3540bp|location=Sequence derived from alignment at ch3:1787034..1788857- (Aspergillus niger KJC3)
GACAGCATTCCAGCCATTATTCGGTCAGATCGCCGATATTTACGGTCGCC
GATGGCCCATGATCATCAGCACCGCGACCTTCACCCTAGGCAGTGGCCTC
TCCGGCGGCGCCAGCAACATCGACATGCTAATTGCCGGGCGACTTATCCA
AGGCATCGGTGCAGGCGGCATTAACGTACTCATCGAAATCATCGTCTGCG
ATTTGCTTCCCCTCCGCGAACGAGGCCGCTACCTAGGCCTCATGTTTGGT
CTCATCGCTATCGGCACCACCCTCGGCCCTCTCTTCGGCGGCCTCATCGT
CCAGTACACCACCTGGCGCTGGGTCTTCTACCTTAACGTCCCCATCGGCG
GGGCCGCCATGGTTACATTATTCCTTTTCCTCCACGTAAAGTCCGATCGC
ACCCCCGACTACCTGCAGCGCCTGAAACGCATCGACTGGCTTGGCAACAC
CCTCTTCGTCCTCTCCATGGTCTCTGTCCTGATCGCCCTTTCCTGGGGCG
GCAGCCAATACCCCTGGTCATCCTTCCGCGTCATCGTCCCTCTAGTCCTC
GGTTTCGCTGGCTTCGCCATCTTTTTACTCTATGAAGCTTCCCCGAAGTA
CTGCCTCAACCCTACCATGCCGCTGCACCTGTTCGCTAACCGCACCTCCG
CCACGGCCTTTGGCCTCACCTTCTTGCACAGCCTCTCTGCTATCGCAGTC
ATGTACTTCCTCCCTGTCTACTTCCAGGCTGTCCTTGCCGCATCCCCGAG
CCGCTCAGGCGTCCAACTCCTCCCTACGATCCTGTTCATGATCCCCGCCG
CCATCATCGCCGGCGGCTTACTCTCCAAGCTGGGCCGCTACCGTCCCATC
CAACATGCTGGCTTCGCCTTCATGATTATTGGTTTCGGGTTATTGACTCT
ACTAAACGCTCACGCGAGCACGGGCCAGTGGGTCGGATACCAAATCCCCA
GCGCGGTGGGGACGGGTCTCGCTCTCCCTGTCCTTCTTCCTGCTGTGCAG
GCGTCGCTCACGGAAGCGGATACGGCGCTCTCTACTTCGACGTGGGCGTT
TATTCGCAGTTTCGGGCTTATTTGGGGTGCGACGATTCCGACGGCGGCGT
TTAACAATCGAGTGAATGCGTTGTTGGGGAGAGTTAGCGACTTGAGTGTT
GCGGAGCAGTTGAGGGATGGGAAGGCATATGAGGCTGCTACGAAGGCGTT
TATGGATTCAATTACAGATGCGGTGACGCGGGCGCAGGTGGTGAGCGTTT
ATGTGGATGCTATTAAGACGGTGTGGTATGTTTCAATGGCGTTTGCGGGA
CTGGCGTTTTTGCTGGTTATTGTTGAAAAGGAAATTCCGTTGCGGAAGGA
GTTGGATACCAAGTTTAGTATGGAGGAGAAGGAGAAGGATGGAGAGACGG
CGTATCAACAAGCCCCTTGAATGGCTGCCAACGCTTCGTCGAACGACACC
TCCACCAGCGCCCATGCAATATACACAAGAAGCTTCGCCGCTGGGCTAGA
GCAAGACAACATGGCCCATGCAACAGGAGAAGTCTCCTCTAAGGGGACAA
TCGCCAAAAAGCAGAGCAACAGATACGGTGACGAAGGGACCCAGCCAGCG
ACCACGAAAAAGTCTGTTCGTTTCTTTGCGATCATCGCGGCACTCGCGCT
CTCTGGGCTCTTAACTTCGTTGGAGGCGACCATCACCTCCACTGCTCTGC
CAACCATTACAGCAGACCTGGGAGGTGCCAGTCTTTATGTATGGGTGGTC
AATGGATTCTATCTTACTCAGACAGCATTCCAGCCATTATTCGGTCAGAT
CGCCGATATTTACGGTCGCCGATGGCCCATGATCATCAGCACCGCGACCT
TCACCCTAGGCAGTGGCCTCTCCGGCGGCGCCAGCAACATCGACATGCTA
ATTGCCGGGCGACTTATCCAAGGCATCGGTGCAGGCGGCATTAACGTACT
CATCGAAATCATCGTCTGCGATTTGCTTCCCCTCCGCGAACGAGGCCGCT
ACCTAGGCCTCATGTTTGGTCTCATCGCTATCGGCACCACCCTCGGCCCT
CTCTTCGGCGGCCTCATCGTCCAGTACACCACCTGGCGCTGGGTCTTCTA
CCTTAACGTCCCCATCGGCGGGGCCGCCATGGTTACATTATTCCTTTTCC
TCCACGTAAAGTCCGATCGCACCCCCGACTACCTGCAGCGCCTGAAACGC
ATCGACTGGCTTGGCAACACCCTCTTCGTCCTCTCCATGGTCTCTGTCCT
GATCGCCCTTTCCTGGGGCGGCAGCCAATACCCCTGGTCATCCTTCCGCG
TCATCGTCCCTCTAGTCCTCGGTTTCGCTGGCTTCGCCATCTTTTTACTC
TATGAAGCTTCCCCGAAGTACTGCCTCAACCCTACCATGCCGCTGCACCT
GTTCGCTAACCGCACCTCCGCCACGGCCTTTGGCCTCACCTTCTTGCACA
GCCTCTCTGCTATCGCAGTCATGTACTTCCTCCCTGTCTACTTCCAGGCT
GTCCTTGCCGCATCCCCGAGCCGCTCAGGCGTCCAACTCCTCCCTACGAT
CCTGTTCATGATCCCCGCCGCCATCATCGCCGGCGGCTTACTCTCCAAGC
TGGGCCGCTACCGTCCCATCCAACATGCTGGCTTCGCCTTCATGATTATT
GGTTTCGGGTTATTGACTCTACTAAACGCTCACGCGAGCACGGGCCAGTG
GGTCGGATACCAAATCCCCAGCGCGGTGGGGACGGGTCTCGCTCTCCCTG
TCCTTCTTCCTGCTGTGCAGGCGTCGCTCACGGAAGCGGATACGGCGCTC
TCTACTTCGACGTGGGCGTTTATTCGCAGTTTCGGGCTTATTTGGGGTGC
GACGATTCCGACGGCGGCGTTTAACAATCGAGTGAATGCGTTGTTGGGGA
GAGTTAGCGACTTGAGTGTTGCGGAGCAGTTGAGGGATGGGAAGGCATAT
GAGGCTGCTACGAAGGCGTTTATGGATTCAATTACAGATGCGGTGACGCG
GGCGCAGGTGGTGAGCGTTTATGTGGATGCTATTAAGACGGTGTGGTATG
TTTCAATGGCGTTTGCGGGACTGGCGTTTTTGCTGGTTATTGTTGAAAAG
GAAATTCCGTTGCGGAAGGAGTTGGATACCAAGTTTAGTATGGAGGAGAA
GGAGAAGGATGGAGAGACGGCGTATCAACAAGCCCCTTGAATGGCTGCCA
ACGCTTCGTCGAACGACACCTCCACCAGCGCCCATGCAATATACACAAGA
AGCTTCGCCGCTGGGCTAGAGCAAGACAACATGGCCCATGCAACAGGAGA
AGTCTCCTCTAAGGGGACAATCGCCAAAAAGCAGAGCAACAGATACGGTG
ACGAAGGGACCCAGCCAGCGACCACGAAAAAGTCTGTTCGTTTCTTTGCG
ATCATCGCGGCACTCGCGCTCTCTGGGCTCTTAACTTCGTTGGAGGCGAC
CATCACCTCCACTGCTCTGCCAACCATTACAGCAGACCTGGGAGGTGCCA
GTCTTTATGTATGGGTGGTCAATGGATTCTATCTTACTCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_003384KJC3_003384Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003384-T1KJC3_003384-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003384-T1.cdsKJC3_003384-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_003384-T1.exon2KJC3_003384-T1.exon2Aspergillus niger KJC3exon
KJC3_003384-T1.exon1KJC3_003384-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:1787034..1788857 -
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